Labeo rohita (rohu): 127174759
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Entry
127174759 CDS
T09007
Symbol
dctn1b
Name
(RefSeq) LOW QUALITY PROTEIN: dynactin subunit 1
KO
K04648
dynactin 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04814
Motor proteins
lroh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127174759 (dctn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127174759 (dctn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127174759 (dctn1b)
03036 Chromosome and associated proteins [BR:
lroh03036
]
127174759 (dctn1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127174759 (dctn1b)
Membrane trafficking [BR:
lroh04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
127174759 (dctn1b)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
127174759 (dctn1b)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
127174759 (dctn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
127174759
NCBI-ProteinID:
XP_050981295
LinkDB
All DBs
Position
13:13178893..13212664
Genome browser
AA seq
1260 aa
AA seq
DB search
MSQMKRYTYSRTTSSGSSRMSSDGGGRPVKVGSVVEVIGKGHRGTVAYIGNTLFASGKWV
GVILEEPKGKNDGTVQGKRYFTCQENHGIFVRQSQIQLVEDGADTTSPDTPEAATSKMLK
REIIEGPKSNKVRGTKPKKAPTTRKTTTRRPKQTRAGVGVKVGSGSASAGEMSSSEPSTP
AQTPLAAPVIPSPVGTLPSPGAPPIPGPSKEEESLRAQVKDLEEKLETLKMKRTEDKAKL
KELEKHKIQLEQLQEWRSKMQEQQNELQKQLKEAKKEAKDALEAKEHYMEEMADTADAIE
MATLDKEMAEERAESLQLEADALKERVDELTMDLEILKXEIEEKGSDGAASSYHVRQLEE
QNARLKEALVRMRDLSASEKQEHAKQQKLMEKKNFELDTLRCQKEKLQEEMKMAEKTIDE
LKEQVDAALGAEEMVEMLTERNLDLEEKVRELRETVTDLEAINEMNDELQENARETELEL
REQLDLSAANVREAEKRVEAAQETVADYQQTIQKYRELTAHLQEVNRELMSQQEASTEQQ
QQPAEIFDFKIKFAETKAYAKAIEMDLRKMEVTQANRQVSLLISFMPDSFLKHGGDHDCI
LALLLIPRLICKAELISKQAQEKFELTETCSQRAGMRGAVGEQLSFAAGLIYSLSLLQAT
LHKYEHALSQCSVDKYKRVGSLYSEMSVHERSLDFLIDLLYKDLLDETVNVEPLTKAIKY
YQHLYSIHLAEQPEDCTMQLADHIKFTQSALDCMAVEVGRLRAFIQTGQDEEAFCVLLKD
LDTSCSDIRQFCKKIRRRMPGTDAPGIPAALSFGPQVCETLAESRRQLAWVNAVLQEVAA
AAAQLIAPLSEHEGLPAVKLEDMAFKAAEQIYGSQGINPQECLRQSCSVVIATMNKMATA
MQEGEYDSERPQNGISPVEVRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEEL
SEANVRLSLLEKKLDSASKDADERVEKIQMVLDETVSLLKKKEKEFEETMDALQADIDQL
EAEKAELKQRINNQSKMTMEGLRGSQGSGIASIVTCGITPGVCTAAGVQVIDSPLLTQQI
EAQRLSIKHLKNENNRLKAEKMRAQLASLPPLNVPKLGWREGCRPEVLSSALYRKTDQLL
DTLLQMSANVKVVDITGKSPVSPSAQLLEQTARLQSLSDTLDRLKDEVAEHVVTHRPGAQ
VSSDFATFPCTSFVKAKEEKKGDAVLVGRVMMPCARGQEQVHRLVLSNTQLQRVHRLLQT
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagatgaaacgatacacttacagcaggaccaccagcagtggcagcagtaggatg
agttcagatggaggtgggcggcctgttaaggtgggctctgtggtagaggtcatcggtaaa
ggtcatcgaggcaccgtggcatatattggaaataccctctttgcctctgggaaatgggtg
ggagtcattctagaggaacctaaaggcaagaacgatggcactgtgcagggtaaacgatac
ttcacctgtcaggagaatcatgggatatttgtacgccaatcacagattcagttagtagaa
gatggggccgacacgacatctcctgacacacctgaagctgccacctccaaaatgctgaag
cgggagataattgaaggtccaaagtcaaacaaagtgcgaggaaccaaacccaaaaaggca
cctacgactcgtaagaccaccaccagaaggcccaagcaaacgcgggctggagtgggggtg
aaggtgggctctggatcagcttctgctggcgagatgagcagcagtgaacccagcacacct
gcccaaacaccgctggctgctccagttataccttcacctgttggaactcttccctcgccc
ggagctcctcccatcccgggacccagcaaggaagaggagtcgctgcgtgcccaggtgaag
gatctggaggagaagctggagacgctgaagatgaagaggacagaggacaaggcaaagctg
aaggagcttgagaagcacaagattcagctggagcagctgcaggagtggaggagtaagatg
caggaacaacaaaatgagctgcagaaacaactcaaggaggccaagaaggaagctaaggac
gctcttgaagctaaagagcactacatggaagagatggcagatacagcggatgccattgag
atggccacactggataaggaaatggctgaagaacgggccgagtcactgcaactggaggct
gacgctttgaaagagagagtggacgagctgaccatggacttggagatactcaaanntgag
atagaggaaaaagggtcagatggagcagcgtctagttatcatgtgaggcagttagaggag
cagaatgctcgactgaaggaggctttggtgaggatgcgtgacctgtctgcatcagagaaa
caggagcatgcaaagcagcagaaactaatggagaagaagaattttgagctggatacgctg
agatgccagaaagagaaactacaggaggaaatgaagatggctgagaaaacgattgatgag
ctcaaagagcaagtggatgctgctcttggggcagaggagatggtagaaatgttgacagag
cgtaatctggacctggaggagaaagtacgggagctgagagaaaccgtcacagatctggaa
gccatcaatgagatgaatgatgagctgcaggagaacgcaagagagacggagctggagttg
agagaacagttggatctgagcgctgccaacgtcagggaggcggagaagcgtgtggaggcg
gcacaagaaacagtagcagactaccagcagacaatccagaaatacagagagctgactgca
cacctgcaggaggtgaacagggagctgatgagccaacaggaagccagtaccgagcagcag
caacagcctgcagagatctttgatttcaagataaaatttgcggaaaccaaagcttatgct
aaggccatagaaatggatctgcgtaaaatggaggtaactcaggctaacagacaggtgtca
ctgctgatttccttcatgcctgactccttcctgaaacacggaggagatcatgactgtatc
ctggctctgctgctcatcccacgactcatctgcaaggcagagctgatcagtaaacaggca
caggagaagtttgagttgactgagacgtgctcccagagggcaggcatgagaggagccgtc
ggagagcagctgagctttgctgctggactcatctattctctctcactcctgcaggcaaca
ctgcacaaatatgaacatgctctgagtcagtgcagtgtggacaagtacaagcgtgtgggt
tctctgtactctgagatgagcgttcatgagcgatccctggatttcctcatagacctttta
tacaaagacctcctggatgaaactgtcaatgtggaacctctcaccaaagctattaaatac
tatcagcacctttacagtattcatctcgctgaacaacctgaggactgtaccatgcagcta
gcagaccacatcaaattcacccagagtgctctggactgtatggcagtggaggtggggcgt
ctgagggccttcattcaaactggacaggacgaggaagcgttttgtgtgctgctgaaggat
ctggacacttcctgtagtgacatacgacagttctgcaagaagatccgtcgtcgcatgcca
ggcactgatgcaccgggcatcccagctgccctcagctttggaccacaggtgtgtgagact
ctggcagaaagcagaaggcagctggcctgggtgaatgcagtgcttcaggaagtggcagcg
gcagccgctcagctcatcgcccctctcagtgaacatgagggactgccagccgtcaaactg
gaagacatggcctttaaagcagctgaacagatctatgggtcacagggcataaaccctcaa
gaatgtctgcgccaatcatgcagtgttgtgatagcaaccatgaacaagatggctactgct
atgcaggagggagaatatgactctgaaagaccacagaatggaatatctcctgtggaagtc
cgagcagcagcgctaagggcggaaatcactgatgctgaaggactcggcctcaaacttgaa
gacagagaaactgtcattaaggagcttaagaaatcccttaaaataaagggagaggaactg
agtgaggccaatgtgcgtctcagtttattggagaaaaagctggatagtgcgtctaaagat
gcggatgagcgagtggagaagatccagatggtcctagatgagaccgtttcgctgctgaaa
aagaaggaaaaggagtttgaggagaccatggatgctcttcaagctgacatagaccaacta
gaggcagagaaagcagagcttaagcagagaatcaacaaccagtcaaagatgaccatggag
ggtctaagaggaagtcaaggctctggcattgcctccattgtgacttgtggcatcactcct
ggtgtgtgcacggccgcgggagtgcaagtcatagactctccactgctgactcaacagatt
gaagctcagcgtctcagtataaagcacctgaagaacgaaaacaacagactaaaggcagaa
aagatgcgtgctcagctggcatctcttcctcctctgaacgtgccaaagctgggctggcga
gaaggctgcaggcctgaggtgttgtctagtgccctctaccgcaaaacagaccaactactg
gatacgctcctccagatgagcgccaatgtgaaagtagtcgacattacagggaaatctcca
gtgagtcccagtgcgcagctcctagagcaaacagcaaggctgcagtcgctcagcgacact
ctcgataggcttaaggacgaagttgctgagcatgtagtgactcataggcctggtgctcaa
gtctcgtctgatttcgccacttttccctgcacttcctttgtaaaggcaaaggaggagaag
aaaggagatgctgtactagttggtcgtgtgatgatgccttgcgctcgaggacaagagcag
gtgcaccgtctggtgctttcaaacacacagttacaaagagttcatcgccttctccagact
taa
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integrated database retrieval system
