Labeo rohita (rohu): 127174782
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Entry
127174782 CDS
T09007
Symbol
lbx1a
Name
(RefSeq) transcription factor LBX1a
KO
K09353
homeobox protein LBX
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127174782 (lbx1a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
127174782 (lbx1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
MRI
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
127174782
NCBI-ProteinID:
XP_050981321
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Position
13:complement(19945144..19965744)
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AA seq
269 aa
AA seq
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MTSKEDAKGASVEDRRRSPLDHLPPPANSNKPLTPFSIEDILNKPSVKRSYTICGTAHLL
SSGEKHASTGHPLSNRALLTQTSPLCALEELASKTFKGLEVSVLQAAEGRDGMTLFGQRN
TPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKL
KRDLEEMKADVESAKAVGNVPFEKMAKLADLEKCVNGTLGESVSKSPSLSNHEHEGTNKL
HMSPSSPFTDHTTSKECSEDEDEEIDVDD
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaaagaagacgcaaaaggcgcctcggttgaggatcgaaggcgcagtccgttg
gaccatcttcctccacctgctaactcaaacaagcccctcactcccttcagcatagaggat
attttaaacaaaccttctgtcaaacgaagttacacaatttgcggcacggcgcacctgctt
tcgtccggtgagaagcacgcttccacgggccatcccctctccaaccgcgcgttgctcacc
cagacatctccactgtgcgccctggaggaactcgccagcaaaaccttcaagggactggaa
gtcagtgttctacaagcggcagaaggaagagacggcatgacactcttcggtcaaaggaat
acccctaaaaagcggagaaagtcgagaacagcctttaccaatcaccaaatttacgaactg
gagaagagatttctctatcagaaatatctgtctcctgctgatcgggatcagatcgctcag
cagctcgggctcacgaatgctcaagtcatcacctggttccagaaccgtcgagccaagctc
aaaagagacctggaggagatgaaagcggacgtggagtcggccaaagcagtaggcaatgta
ccttttgagaaaatggccaaactggcagacctagagaaatgcgtcaatggcactctcgga
gaatcagtgtccaagtcaccttcgctatctaaccacgaacacgagggcaccaacaaactc
cacatgtcaccgtcatcaccgtttacagaccacacaacgagcaaagagtgttcggaggac
gaagacgaggaaattgatgtcgatgactga
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