Labeo rohita (rohu): 127174810
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Entry
127174810 CDS
T09007
Symbol
six6a
Name
(RefSeq) homeobox protein SIX6a
KO
K19473
homeobox protein SIX3/6
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127174810 (six6a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
127174810 (six6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
127174810
NCBI-ProteinID:
XP_050981360
LinkDB
All DBs
Position
13:22171745..22179980
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AA seq
245 aa
AA seq
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MFQLPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPSACEVLGKNESVLRARAVV
AFHAGNFRELYHILENHKFTKDSHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFP
LPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRR
QRDRAAAAKNRLQQQVLSGGSVRSLGDDDTTVDRLGPASSPEVSLSSKAATSAISITSSD
SECDI
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgttccagctgcccatcttgaatttcagcccccagcaggtcgcgggggtctgcgagacg
ctcgaggagagcggcgacgtggagaggctcggccgcttcctctggtcgctcccggtggcg
ccgtccgcctgcgaagtcctcgggaagaacgagtctgtcctgcgcgcgcgcgcggtcgtg
gcctttcacgcgggcaacttccgcgagctctaccacatactggagaaccacaaattcacc
aaggactcacacgcgaaactgcaagcgctctggctcgaggcgcactaccaggaggctgag
aaactccgtgggcgtccgttaggacccgtggacaagtaccgcgtccgaaagaagtttccg
ctgcctcggacgatatgggacggcgaacagaaaacgcactgcttcaaggagagaacgcgg
catctgttgagagagtggtacctgcaggacccttacccgaacccgagcaaaaaaagagag
ctggcgcaggcgactggactcacgcccacacaagtgggcaactggtttaaaaaccgaagg
cagagagaccgggcggcagcggccaagaacaggctacagcagcaggttctgtccggtggc
tcggtccgatcgctgggggacgatgacaccacagtagaccgcctgggtcccgcctcaagc
ccagaagtcagtctctcgagcaaggccgccacctccgccatctccatcacctccagcgac
agtgaatgtgacatctaa
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