Labeo rohita (rohu): 127174878
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Entry
127174878 CDS
T09007
Symbol
vcla
Name
(RefSeq) vinculin a isoform X1
KO
K05700
vinculin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04520
Adherens junction
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127174878 (vcla)
04520 Adherens junction
127174878 (vcla)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127174878 (vcla)
04810 Regulation of actin cytoskeleton
127174878 (vcla)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127174878 (vcla)
04147 Exosome [BR:
lroh04147
]
127174878 (vcla)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
127174878 (vcla)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127174878 (vcla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
127174878
NCBI-ProteinID:
XP_050981466
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All DBs
Position
13:complement(17953926..18011056)
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AA seq
1149 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTSPVAAVQAAVSNLVRVGKE
TVQTTEDKIMKRDMPPAFIKVENACAKLVEAAQMLRTDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVTSMNTVKELLPVLISAIKIFVTTKCTKSHGVEEALKNRNYTFEKMSAE
INEIIRVLQLTSWDEDAWANKKDTEAMRRALALIESKMGQAKGWLRDPNGLPGDPGEHAL
RQILDEAGKVGELCAGKERREILGTAKTLGQMTDQVSDVRARGQGATPMGMQKAQQVGQG
LDILVGKVENAARKLEALTNAKQAIAKRIDTAQSWLADPNGGPEGEENIRALLVEAKRIA
DLCEDPKERDDILRSISEVAGLTARLVELRKMGKGDTPEARALAKQIGTALQNLQAKTNR
AVANMRPAKAAVTLEGKMEQALHWINNPGVDDHGVGQAAIRGLIAEGRRLANSLPGPYRQ
DLLAKCERVEQLMMQLADLAARGEAESPQARAVAAHLLEAIKDLKAKMQEAMTQEVSDVF
SDTTTPIKLLAVAATAPLEAPNREEVFEERASNFENHAGRLGATAEKAAAVGTANKSTVE
GIQAAVKSARDLTPQVTSAARILLKNPGNQAAYEHFETMKNQWIDNIERMTSLVDEAIDT
KSLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRVLLVAKREVENSEDPKF
RELVKAASDELGRTISPMVMAAKAVAGNIQDPGSQKIFLDSGYRILAAVGKVREAFQPQE
PDFPPPPPDLDQLHVSDDQAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEMVSEPMM
VAARQLHDEARKWSSKPPQPPQPPQPPQPPQPPQPPQPEVTDEGFEAEVDIDDEDEFTDN
EDDYEPELLLMSSNQPVNQPILAAAQSLHQEARKWSSKGNDIIGAAKRMALLMAEMSRLV
RGGSGNKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKI
LSTVKATMLGRTNISEEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLR
WVRKTPWYQ
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgccagttttccacaccaagacgatagagagtatcctggagccggtggctcagcagatt
tcccacttggttatcatgcacgaggagggcgaagttgatgggaaagcgatcccagatctc
accagcccagtggcggcagtgcaagcggctgtcagcaacctcgtgcgggtggggaaggag
acggtacagaccacagaagacaagattatgaaaagagacatgcctccggccttcattaag
gtggagaatgcttgtgcaaagctggtggaagcagctcagatgttgagaacagacccgtac
tctgtcccggcccgtgattacctcatcgatggctcgcggggaatcctctctggcacttca
gacctgcttctgacctttgacgaggcagaggtgcgtaaaattatccgggtgtgtaaaggc
atcctggagtatctgaccgttgcagaggttgtggaaaccatggaggatttgatcacttac
actaaaaacctgggaccaggcatgacgaaaatggcaaagatgatagacgagcggcaacag
gagctgacacaccaggagcaccgtgtgatgctggtcacctccatgaacacagtgaaggaa
ctgctgcccgtgcttatatcagccattaaaatctttgtgacaaccaagtgcactaagagt
catggcgtggaggaggccttgaagaacagaaactacacgtttgagaagatgagcgccgaa
atcaacgagataatcagagtgctgcaactcacttcatgggacgaggatgcctgggccaac
aaaaaggacacagaggccatgaggagagcactagcactgatcgagtcaaagatgggtcag
gctaaaggttggctgagggaccctaacggtctaccaggagatccaggagagcatgcgctg
cgtcagatactggatgaagcaggaaaagtgggtgagctttgtgcgggtaaagagagacga
gagatcctgggaacagccaagaccttgggccagatgacggatcaggtgtcagatgtgcgc
gccagaggtcagggtgctacccctatgggtatgcagaaagctcagcaggttggccagggt
ttggatattctggtggggaaagtggagaacgctgctcggaagctggaggctctgaccaat
gccaaacaggccatcgccaagagaatcgacacagctcagagctggctggccgatcctaac
ggtggtccggagggggaagaaaacatccgtgctcttctggtggaggccaagcgcatcgct
gacctgtgtgaagaccctaaagagagagacgacattctgcgctccatcagtgaggttgca
ggacttactgcgagactggttgaacttcgtaaaatgggtaaaggggatactcctgaggct
agagcgcttgccaaacagattggcacagctttgcagaacttgcaggcaaagactaaccgt
gctgtggccaacatgagacctgccaaggcagctgttacactagagggcaaaatggagcag
gccttgcactggattaacaaccctggagtggacgatcatggagtaggccaggctgccata
cgggggctgatagcggaaggccgccggctggcgaactctctaccaggaccgtacagacag
gatctgctagcaaagtgtgagcgagtggagcagctgatgatgcagttggcagatcttgcg
gcgcgaggagaggcagagagtcctcaggcgcgcgctgtggctgctcatcttctggaggca
attaaagatttgaaggcgaagatgcaggaggcaatgacccaggaggtgtctgatgttttt
agtgatacgaccacaccaattaaactccttgcagtggcagcaacggcgcctcttgaggcc
cccaacagagaggaggtctttgaagaaagggcgtctaactttgagaatcatgccggtaga
ctgggtgctacagcggagaaggccgctgctgtgggaacagccaataagagcacagttgaa
ggcatccaggcagctgtgaaatcagccagagatctaacacctcaggtcacttctgctgca
cgaattttgctgaaaaaccctggcaaccaggccgcatacgagcactttgagaccatgaag
aaccaatggattgacaacattgaaagaatgaccagtcttgtggatgaagccattgacacg
aaatccctcttggatgcttcggaggaggctattaagaaagacattgataaatgccgggtg
gcaatggctaatgttcaaccccagatgttggttgcaggggccaccagcattgcccggcgg
gctaaccgggtccttctggtggccaaacgggaagtggagaactcagaggatcctaaattc
agagaactggtcaaagctgcttcagacgaacttggtagaacaatctcacccatggttatg
gctgccaaagccgtggcagggaacatccaagatccaggttcacaaaagatcttcctggac
tctggctacaggatcttggctgctgttgggaaagtcagagaagccttccagcctcaggag
ccggactttccacctccacctccagaccttgatcagctgcatgtcagtgatgatcaggct
cctcccaaaccgcctctcccagagggagaggttcctcccccgagacctccacccccagag
gagaaagacgaggagttccctgagcagaaagctggcgagatggtgagcgagccaatgatg
gtagcggccaggcagctacacgacgaggcccgtaaatggtccagcaagccaccccagcct
ccccagcctccccagcctccccagcctcctcagcctccccagcctcctcagcctgaagtg
acagatgagggttttgaggcggaagtagatatagacgatgaggatgaattcacagacaac
gaggatgattatgagccagagctgctcttaatgtcttccaatcagccagttaaccagccc
attctggccgctgcgcagtctttgcaccaggaggctcgcaagtggtccagtaagggtaat
gatatcattggagcagctaagcgcatggccctgctcatggcggaaatgtctcgcctagtg
cgtggaggcagtgggaataaacgtgccctcattcagtgcgcaaaagacatcgccaaggcc
tccgatgaggtcacacggctggctaaggaggtagccaagcaatgcaccgacaaacggatt
cgcacaaacctgttgcaggtttgtgagcgtatcccaactatcagcactcagctgaagatc
ctgtccacagtaaaggccactatgttgggacgtacaaacatcagtgaggaagaatctgag
caggctacggagatgcttgtgcacaatgcacagaacctcatgcagtctgtgaaagagacg
gtcagagaagctgaagccgcctccatcaagatccgcacagatgcagggttcactcttcgc
tgggtccgaaagaccccctggtaccagtaa
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integrated database retrieval system
