Labeo rohita (rohu): 127174894
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Entry
127174894 CDS
T09007
Symbol
atrn
Name
(RefSeq) attractin
KO
K24332
attractin
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lroh04091
]
127174894 (atrn)
Lectins [BR:
lroh04091
]
C-Type lectins
Others
127174894 (atrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_5
EGF_LMN_ATRN
Kelch_3
Kelch_4
CUB
Kelch_2
PSI
EGF_TEN
Kelch_6
NANM
EGF_Teneurin
PSI_integrin
EGF_DL_JAG
EGF_laminin
EGF_2
TMEM100
DUF4842
Motif
Other DBs
NCBI-GeneID:
127174894
NCBI-ProteinID:
XP_050981501
LinkDB
All DBs
Position
13:complement(11900724..11990759)
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AA seq
1383 aa
AA seq
DB search
MAAEVRRALGRGWCLTLGLARVGLHGTVLRSLLFVTALSGLVRLPAATEAKECDKPCLNG
QCNTASGVCVCEPGWVGEQCQHCGGRFRLTGPSGYLSDGPGNYKYKTKCTWLIEGQLNSI
LRLRFEHFATECSWDHLYVYDGDSIYSPLLAAFSGLIVPESYSNETVPEVVAQSGFTLLH
FFSDAAYNLTGFNISYRLNTCPSNCSDRGECRVGNSSDSVQCVCEDGWKGEACDVPYCFS
DCGFPLRGQCDTAAKRCQCKPGWQGLDCSITVPANVSFWTREEYSGHGLARASHKAVVHE
DVMWVIGGHVFNYTHYQMVTAFNISSQSWMTLNRSVNSVTGRYGHSLSLHEDKIYMYGGK
IDSTGNVTSELWVFHTQNQSWVMLNPRAKEQYAVVGHSAHTVQLYPDGSEPVILVVFGHC
PLYGYISQVQQYNIVKNTWSVLETRGALVQGGYGHSSVYDPQTRSIYIHGGYKAFSANKY
GLAGDLYRYDVDKRMWLILRDSGFFRYLHTAVIVGGNMLVFGGNTHNDTSMSHGAKCFSS
DFIAYSIACDEWTVLPNPDLHHDVNRFGHSAVFHDGVMYVYGGFNSLMLSDVLRFTPASC
AAFSEQLECVTAVPGVKCVWNSTTSTCMSWDAVAPHDTEGLRNTCSPRGYADGEKCDQYS
DCYSCTANTNSCQWCAAACVSGHSNCTSSPGGIMEYEVCPKDNPSFVCSKKTSCKSCATD
QNCQWETRNQECTTLPGNICGESWHLVGNSCLKLITAKDSYDNAKLACRSHQAVLASLTT
QKKVQFVLKEMHNRSLQSKAVITPWVGLRKINVSYWCWEDMSPFTNSTLQWLPGEPSDAG
FCGYLAEPTFNGLKAATCVNSVNGSLCERPTNHSVKQCRTPCALRSSCSECTSGSSECMW
CSNMRQCVDSNAYVASFPYGQCMEWYTMNSCPPENCSGYKTCGHCLEQPGCGWCTDPSNT
GRGQCIEGSYRGPIQTLFHAPSSSGPSLIPAPQPMLNVSLCPLEGNYNWSFIQCPACQCN
GHSSCVNESVCERCEDLTTGKQCESCISGYYGDPTNGGSCQSCKCNGHASMCNSNNGKCF
CTTKGIKGDRCHLCEVENRYQGNPLKGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATP
DEQNRDLDMFINASKNFNLNITWATSFTAGTQAGEEIPIVSRSNIKEFKDSFSNEKFDFR
SNANITFYVYVSNFTWPVKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQS
CWASRRREQLLREMQQMASRPFATINVALETDEEPPDLIGGNVKSVPKPIALEPCFGNKA
AVLSIFVRLPRGPGGIPPPGQSGLAVASALVDVSQQMCLGYKEKSGGLRSRKQQPLAQPA
TCI
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggaggttcggagggcccttggccggggctggtgtctgacactcggcctggct
cgcgtaggccttcacggcaccgtactgcgatctcttctcttcgtcacagccctcagcgga
ctggtccgtctacccgcggccacggaggcgaaggagtgcgataaaccatgcttgaacggc
cagtgtaacacagccagcggcgtctgtgtatgcgagccgggatgggtcggggagcagtgc
cagcactgcggcggccgcttcaggctaacgggaccctcaggctatctctctgatggacca
ggaaactacaaatacaagaccaagtgcacatggcttattgagggacagctgaactctatc
ctgaggcttcgctttgagcattttgccaccgagtgcagctgggatcatctgtatgtgtat
gatggagactccatctactctcctttacttgccgccttcagtggtttgattgttcctgag
agctacagcaatgagactgtcccagaggtggtggcacagtctggcttcaccctgctgcac
ttcttcagtgatgctgcgtataatctcactggcttcaacatctcctacaggttgaatacc
tgccccagtaactgctctgatcgtggggagtgtcgtgtagggaattccagtgactctgtg
cagtgtgtatgtgaggacggctggaaaggagaggcctgtgatgtgccctactgcttctct
gactgtggcttccctctgcggggacaatgtgacaccgctgccaaacgctgccagtgcaaa
ccaggatggcaaggcctggactgttcaataaccgtaccagcaaatgtttccttttggaca
cgtgaggaatacagcgggcatggcttggcgcgggcgtcccataaggctgtggttcatgaa
gacgtgatgtgggtgataggtggacatgtgttcaactacacacactaccagatggtgact
gccttcaacatttcttctcaaagctggatgacgttaaaccggtccgtcaactctgtaact
ggacgctacggtcattctctctccctgcatgaggataaaatctacatgtacggtgggaag
attgactccactggaaacgtgacatcagaactgtgggtgttccacacacagaaccagtcg
tgggttatgctgaatccacgtgctaaagaacagtatgccgtcgtgggccattctgcacac
actgtccagctctatcccgacgggtcggagcccgtcatactggtggtctttggacactgt
cctctttatggatacatcagccaagtgcagcagtacaacattgtgaagaacacatggagt
gttttagagactcgtggtgcactggttcagggtggctatgggcacagcagtgtgtacgac
cctcagactcgctccatctacattcatggagggtataaagctttcagcgccaataaatat
ggcctggccggagacctgtaccgctatgatgtggacaagagaatgtggttgattctgagg
gacagtggttttttccgttacctccacacggcagtgattgttggcgggaacatgctggtg
tttggagggaatacgcacaacgatacctcaatgagccacggggcaaaatgcttctcctca
gacttcatagcatacagcatagcttgtgatgagtggactgtactgcccaatccagatctt
caccatgacgtcaaccgttttggccactcagctgtatttcacgatggggtgatgtacgtg
tatggaggctttaacagcctgatgctcagcgatgtgctgaggttcacccctgcgagctgc
gctgcgttctccgagcagctggagtgtgtgacggctgttcccggcgtgaagtgtgtgtgg
aactctactacctccacctgtatgtcctgggacgcagtggcaccccatgacacagagggc
ttgagaaacacctgcagtcccagagggtatgcagatggtgaaaagtgtgaccaatattca
gactgctacagctgtacagcaaacactaacagctgccagtggtgcgctgcggcctgtgtg
tctggtcatagtaactgcaccagttctccgggtgggataatggagtatgaggtgtgtcca
aaggataacccatcctttgtgtgtagcaagaagaccagctgtaaaagttgtgccacagat
cagaactgccagtgggagacgagaaatcaagagtgcactaccctccctggaaatatctgt
ggggagagttggcacctggtggggaactcgtgtctaaagctgatcacagccaaggactca
tatgacaatgctaaactggcatgtcgcagtcaccaggcagtgctggcatcccttaccaca
cagaagaaagtccagttcgtcctcaaagagatgcataacagatcgttgcaatcaaaagcc
gtcatcactccgtgggtgggtctgaggaagatcaatgtctcgtactggtgctgggaggac
atgtctcccttcaccaactccacgctgcagtggttgccgggcgagcctagcgacgctggt
ttttgtgggtacctggctgagcccacttttaacggactgaaggcggcgacctgtgtcaat
tctgtgaacgggagtctgtgtgaaagaccaacgaaccacagtgtgaagcagtgtcggacg
ccctgtgccctgcgctcttcctgtagtgagtgcaccagcgggagctctgagtgcatgtgg
tgcagtaacatgaggcagtgcgtggactctaatgcttatgtggcatccttcccctacggc
cagtgcatggagtggtacaccatgaacagctgcccaccggagaattgttctggttacaag
acctgtggtcactgtttggagcagcctggctgtgggtggtgcactgatcccagcaataca
ggacggggccagtgtatagagggctcttaccgcggtccaatccaaacactattccacgcc
ccttcctcttcaggcccctccctcattcctgcccctcagccgatgctgaacgtgagcttg
tgcccactagagggcaactacaactggtccttcatccagtgcccagcgtgccagtgtaac
ggacacagctcttgtgtcaatgagagtgtgtgtgagagatgcgaggacctcaccacaggc
aaacagtgcgagagctgcatctccggttactatggcgatcccacaaatgggggcagctgt
cagtcttgtaagtgcaacggccatgccagcatgtgtaactctaacaatggcaaatgcttc
tgtaccaccaagggcatcaaaggagaccgctgccatttgtgtgaggtagagaaccgttac
cagggcaaccctctgaagggaacgtgttattacactctgctgatagattaccagtttacc
ttcagtttgtctcaggaggacgaccgctattacaccgccatcaactttgtggcaactcca
gatgagcaaaatcgagacctggacatgtttatcaatgcctcaaaaaacttcaacctcaac
atcacatgggcaaccagctttacagctgggactcaagctggtgaggaaatccctatagtc
tcccgcagcaacataaaggaattcaaagacagcttctccaacgagaagttcgatttccgc
agcaatgccaacattaccttctacgtgtacgtcagcaacttcacctggccagtcaaaatc
cagatcgctttctctcaacacagtaacttcatggatttggttcagttctttgtcacgttc
ttcagctgtttcctgtccttgcttctggtggcagcagtcgtatggaagataaaacagagc
tgttgggcatcacggcgcagagagcaactcctgcgagagatgcagcagatggccagccga
ccattcgccaccatcaacgtcgccttggagacggatgaggagccgccagacctgattggt
ggaaatgtgaagtctgtgcctaaacccatagctttggagccctgttttgggaataaggca
gcagtgctctccatcttcgttagattacccagaggccccggaggtattcctcctccagga
cagtcaggtctggcagtagcgagtgcattagtggacgtctctcagcagatgtgtctggga
tataaggagaagtcgggaggcttgcgtagccgcaagcagcagccattagcacagcccgcc
acctgcatctga
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