Labeo rohita (rohu): 127174986
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Entry
127174986 CDS
T09007
Symbol
chs1
Name
(RefSeq) chitin synthase 1 isoform X1
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00520
Amino sugar and nucleotide sugar metabolism
lroh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
127174986 (chs1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lroh01003
]
127174986 (chs1)
Enzymes [BR:
lroh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
127174986 (chs1)
Glycosyltransferases [BR:
lroh01003
]
Polysaccharide
Structural polysaccharide
127174986 (chs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
127174986
NCBI-ProteinID:
XP_050981709
LinkDB
All DBs
Position
13:complement(311614..324222)
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AA seq
1450 aa
AA seq
DB search
MEELKQRGRKREGRHRDTWDPFQLNPIGAEKERKRTCFRILQNLVAVIVGLLVLVSGVMS
KGSLLVLTTLTSPVSLRNDVDRQFYTLMLMCVLVMPNMLMFLKSLWKCVFKSYVAPNPKT
LAIMCGIESLVAIGTAILVLIVMPRLDVLTNLCIPGGICILSAALQIAFRLQSQSWMILY
PICSLILVISGYILLVVDYYVRETSHVPGQVEGCYIYVGIAIFASLLVSLNWWENPFQAS
TNIQEMLSQMDSFRDTVYVFTSVIRMALTLGVYFLYYCLIAETRIEWDAFTKASKGTVEI
GLGLFFLQAFCSAACHWFGVVACKIHSVRFAFALPVSLTGPATLILGIILFLTQAESFAP
SPETASLYVIENVTIHTPFWPFCHELQALKDLNTTPVVMLEITHSICKTSLNNPNAMWPF
SMMALEGVCMWLGLVSCTYYVWKIKVQRIERTSQLFVRRLYESAFIDLSMLLNTKMKAVR
SANKESSSSSNDDMENCVIYLCATMWHETYDEMLKIMTSMFRLDRYRGDPKEEHKDCFDF
ECHIFVDDAFMVEKDTNTKLVNTYVSDLIQVVMEVYRVFTNKEPDEVSIIETPYGGRLAF
VMPEGNMLFVHLKDKQLIRHKKRWSQIMYLYYLLGWKGYNVKNPQKITRQNNPSRASLIS
LDGESYLLPSHDNDMKRRHISDDNTYIMALDGDTDFHPGALILLVDRLRMYDNVGAACGR
IHPTGMGPMVWYQKFEYAVGHWLQKTAEHVFGSVLCSPGCFSLFRGSALMDDNVLKRYTT
KATQASEYVQYDQGEDRWLCTLLLQQGWRVEYNAASDAYTNSPQEFKEFYNQRRRWGPST
LANTLDLLHSGAETVKRNTSISMIYILYQIFTVASSILGPASVTLMVAGAFQFVFGIEGT
LCIIIAVIPPTLYMIICFVTKPNFQITIAAILSVIYAFLMTASFFSIIGDMVKQGTFITP
TGLFLVSGAILYMVTAILHPQECTLIIYGLMYFICIPSGYLLLTIYSLVNMHIVSWGTRE
SSKGKEQKKQVGVVCHRDCKMCCWDVKVQVTQETDSLVLQQLQQAVNPHAPAAKAEPNEP
EEPKSQSTQEVHSSLDANKHILDLKDEEMTHKKDVSKENLNKDNDERDNCSDRSGSSKSY
EKKIDDDTDYDDDDDSDDDYDYNEYDALEPKEVVPESDWVDPVKTEFLKKLTYANLKRNL
QEQIRYTLRNKNQEDLCEELVLILTDTLNEELKDKVGPEDVLSVAQLEELQYALNEAARR
IVKTNRIENGAQRLERRVKRAIERTLVAPQVEKLSEDEYDFWEKLLERYLHPIQDDKAHL
EEVTRELKSLRNKAVFLYFIINVLWIVATFFLQAIGTEVLSINIPKYYPNGTLADEPLRV
EPLSLMFLLSFAILLIVQFLAMLYHRVYTLIHVVSYRSTEKNYKEKDEEDEDEGLILGNP
VNLTVTADDL
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggaggaactgaagcagcggggacgcaaaagagaaggccgtcacagggacacctgggac
ccgttccagctgaacccgatcggagccgaaaaagagaggaagagaacatgctttcgtatt
ttgcagaacttggtggccgttatcgtgggcctgctcgtgttggtcagcggagttatgagc
aagggctctctgctggtcttgaccactctgaccagtccagtgtctttgaggaacgacgtg
gacagacagttctacacgctcatgttgatgtgtgtgctagtgatgccgaatatgctgatg
ttcctcaagtctctgtggaagtgtgtcttcaagagctatgtggcccccaacccgaagaca
ctggcgatcatgtgtgggatcgagagtctggtggccatcgggacggcgatactggtactc
attgtgatgcctaggcttgatgttctgacaaacctctgcatccccggaggcatctgcatc
ctttcagccgcgcttcagatcgccttccgcttgcagtcgcagagctggatgatcctctac
cccatatgctccctcatccttgtgatcagcggctacattctactcgtggtcgactactac
gtgagagaaacctcgcacgtcccgggacaagtagaaggttgttacatatacgtaggcatt
gcaatctttgcatctctgctggtttctctgaactggtgggagaacccttttcaggccagc
actaacattcaggaaatgctcagtcaaatggactctttcagagacacagtgtatgtgttc
accagcgtcattcgaatggcattgactttgggggtgtacttcctgtattactgcctgatt
gcggaaactcgcattgaatgggacgcgttcaccaaagccagtaaaggcacagtagagata
ggcctcgggctgtttttcctgcaggcgttctgctccgccgcgtgccactggtttggagtc
gtggcctgcaagatccactccgtgagattcgcttttgctctgcccgtgtcgttaactggt
ccggcaacactgatcctgggcataatccttttcttgacacaagctgagagtttcgcccct
tcacctgaaaccgcgagcttatacgtcatcgaaaatgttacaattcacactcctttctgg
ccattttgtcacgaacttcaagctctcaaggacctcaataccaccccggttgtaatgctg
gaaattacccatagcatctgcaaaacgtcactcaacaatccaaacgccatgtggcctttc
tccatgatggcgctggagggcgtctgcatgtggctcggcctagtctcgtgcacgtattac
gtgtggaaaataaaggtgcagagaatcgaacgcacatcccaacttttcgtacgccgcctg
tatgaatccgccttcattgatctctctatgctgctgaacacgaaaatgaaggcggttcgt
tcggcaaacaaggagagtagtagcagcagcaacgatgatatggaaaactgtgtcatttac
ctttgtgcaacaatgtggcatgaaacatacgacgagatgctgaaaatcatgacttcgatg
ttcagactggacagataccgaggggacccgaaggaggaacacaaggactgctttgacttt
gagtgccatatttttgtcgatgacgccttcatggtagaaaaagacactaatacaaagctt
gtcaacacctatgtttccgaccttatacaagtagtgatggaggtgtacagggtgtttaca
aataaggagcccgatgaggtttccatcattgaaacgccgtatggtggtcgtcttgcgttt
gtcatgccagagggaaacatgcttttcgtccatcttaaagacaagcaactgattcgacac
aaaaagagatggtcacagatcatgtacctgtattacctgcttggctggaaaggatacaat
gtcaaaaaccctcagaaaataacaagacaaaacaacccgagtcgtgccagtctcatatca
ttagatggtgagagttatttactaccttctcatgacaatgacatgaagaggaggcatata
tccgacgacaacacctatatcatggccttggatggagacacagatttccaccccggcgct
ctaatactgctggtcgatcgtctgagaatgtatgacaacgtgggcgcagcctgtggacgg
atccaccccactggaatgggcccaatggtgtggtatcagaagttcgagtacgcagtgggt
cactggctacagaagacggcggagcacgtgtttggttcggttctgtgcagtccaggctgt
ttcagtctgttcagaggatctgcactgatggacgacaatgtcctgaaacgatacaccacc
aaagccacacaagcctctgagtatgtgcagtatgatcaaggtgaggaccgctggctgtgc
actctcctcctgcagcagggctggcgggtggagtataacgctgcttcagatgcttacacc
aactcacctcaagagttcaaagagttttataaccagaggcgccggtggggcccttcaaca
ctggccaacactctcgatctgctccacagcggagcggaaacggtcaagaggaacacctcc
atctccatgatctacatcttatatcagatcttcactgtggcttcctctatcctgggacct
gcctctgtcaccctcatggtagcaggagctttccagtttgtgtttggaattgaaggcacc
ctttgcataataattgctgttatacctccaactctttacatgatcatatgttttgtgacc
aaacccaacttccaaatcacaattgctgctattctgagtgtcatatatgcgttcctgatg
acggcatccttcttttcaatcattggtgacatggttaaacagggaacatttataactcct
actggactcttcctggtgtctggtgcgatcctgtacatggtgacagccatccttcaccct
caagagtgcactttgattatctatggtctgatgtacttcatctgcattcccagtggatat
ctcctcctcacgatatattccctagtcaacatgcatattgtatcttggggcactcgagaa
tccagcaagggcaaggagcagaaaaagcaagtgggtgttgtgtgccatcgtgactgcaaa
atgtgctgctgggatgtgaaagtccaagtcactcaagagaccgatagtctagtccttcaa
caattacagcaagccgtcaatccccacgcacctgcagccaaagccgagccaaacgagcca
gaagagccaaagtctcagagcacccaagaagtccatagcagcttggatgcgaacaaacac
atcctggacttaaaagatgaagagatgactcataagaaggacgtgtccaaagagaatctc
aacaaggacaacgacgaaagagacaattgctctgacagaagtgggagttccaaaagctac
gagaaaaaaatcgatgatgacacagactatgatgatgacgatgacagcgacgacgattat
gattacaatgaatacgatgctctggagccaaaagaagttgtgcctgagagtgactgggtg
gacccggtgaagacagagttcctgaagaaactgacgtacgcaaatctgaagagaaacctt
caggagcaaatccgatacacactgagaaacaagaaccaggaggatctgtgcgaggaactg
gtgctgattctcaccgacaccctgaacgaggagctaaaggataaagtgggtcctgaagac
gtgttgagtgtggctcagctggaggaactgcagtatgcgctgaacgaagccgccaggcgc
atcgtgaagaccaaccgcatcgagaacggagcgcagcgactggagcgacgtgtcaagaga
gcaatcgaaagaacacttgtggctccacaggttgagaaactatctgaggatgaatacgac
ttctgggagaaactgttagagcgttatttgcaccctatacaagatgacaaagctcatctt
gaagaagtgacacgggagctgaagtcactacggaacaaggcagtgtttttgtacttcatc
attaacgtcctatggattgtagcaacgttcttccttcaggccattggcactgaagttctg
agcatcaatattccaaagtactaccccaacggaactttggcagacgaacccttgagggtg
gagcctttgagtttgatgtttctgctgtcgttcgccattctgctcatcgttcagttcttg
gctatgctttaccacagagtatacaccctcatccacgtggtatcgtacagaagcacagag
aaaaactacaaagaaaaagatgaggaggatgaagatgagggactgatcctggggaatccc
gttaatcttaccgtcactgctgatgacttataa
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integrated database retrieval system
