Labeo rohita (rohu): 127175009
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Entry
127175009 CDS
T09007
Symbol
lhx8a
Name
(RefSeq) LIM/homeobox protein Lhx8a isoform X1
KO
K09375
LIM homeobox protein 6/8
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127175009 (lhx8a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
127175009 (lhx8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Arc_trans_TRASH
TRASH_HVO_1752_C
DUF8106
HTH_72
DUF2175
HTH_11
Motif
Other DBs
NCBI-GeneID:
127175009
NCBI-ProteinID:
XP_050981760
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All DBs
Position
2:complement(11385616..11389285)
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AA seq
333 aa
AA seq
DB search
MPATCGGPVLCTLHTIQPHQDKTQELFEEVSCSSSSLSPSSSPHAMTEKAICTSCGTEIV
DKYLLKVNDMCWHVRCLSCSVCQTSLGRHISCYIKEKEIFCKLDYFRKYGTRCAHCGRNI
HSNDWVRRAKGNTYHLACFACFSCKRQLSTGEEFALVDERVLCRVHYDCMLDNLKRAMEN
GKGVNVEGAVPSEQEVNQPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTG
LSRRVIQVWFQNCRARHKKHVSPNHSSATPVSSLQSTRLSPPLIDELQYTAFAPVDTPML
TALHSYMDVHSPTSLVLQPLLPHSMTQLPISHA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgacctgtggaggtccagttctctgcacgcttcacactatacagccgcatcag
gataaaacccaagagctgtttgaagaggtatcgtgttcgtcgtcgtctttgtcgcccagc
tcttcacctcatgccatgacagagaaagccatctgtaccagctgtggcactgagatcgtc
gataaatatctgctgaaggtgaacgacatgtgctggcacgtgagatgcctgtcgtgcagc
gtgtgccaaacatctctgggcagacacatcagctgttatataaaagaaaaggagatattc
tgtaaattggactacttcaggaagtatggaacacgttgcgctcactgtggtaggaatatc
cattcaaatgactgggtccgcagagcaaagggaaacacctaccacctggcttgttttgct
tgcttctcctgcaagagacagctgtccacaggagaagagtttgccctggtggatgagagg
gttctatgtcgtgtgcattatgactgcatgttggacaacctgaaacgtgccatggagaat
ggaaaaggtgtgaatgtggagggagctgttccctcagagcaggaagtgaatcagcctaaa
ccagccaagagggcacggacaagttttacagctgaccagctacaggtaatgcaagcccag
tttgctcaggacaacaatccagatgcccagactttacaaaagttggcagaaagaactggt
ttaagccggagagttattcaggtttggttccagaactgtcgagctcgtcataagaagcat
gttagcccaaatcactcttcagccacaccagtgtcatccctgcagtccactcggctttct
cctcctctaatagatgaacttcagtacaccgcttttgcccctgtagacacccctatgctg
actgcactacactcctatatggatgtccactctcccacttcactggtgctgcagccgctc
ttgccccactcaatgacacagctgcccatcagccacgcctaa
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