Labeo rohita (rohu): 127175044
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Entry
127175044 CDS
T09007
Symbol
khdrbs1a
Name
(RefSeq) KH domain-containing, RNA-binding, signal transduction-associated protein 1a isoform X1
KO
K13198
KH domain-containing, RNA-binding, signal transduction-associated protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127175044 (khdrbs1a)
Spliceosome [BR:
lroh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127175044 (khdrbs1a)
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Gene cluster
GFIT
Motif
Pfam:
Qua1
KH-I_KHDC4-BBP
Sam68-YY
KH_1
STAR_dimer
KH_5
Motif
Other DBs
NCBI-GeneID:
127175044
NCBI-ProteinID:
XP_050981828
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Position
13:complement(31148509..31158670)
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AA seq
376 aa
AA seq
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MDVNNSNNKRKNSAGDSKYLPELLAEKDSLDSSFTHAMKLLSAEIERVQKGEPKKESETY
LDLFANKNVRVKERVLIPVKQYPRFNFVGKILGPQGSTIKRLQEDTGAKISVLGKGSMRD
KNKEEELRKGGDPKYAHLAMELHVHIEVFAPIPDCYLRMAHAMDEVKKFLMPVEGMEDMH
PEAFMDPGFLNGSQDIPGPGRGLPPGRGRGGPPPPMGPRGRGMLPRGAPRGGAPRGGPGR
GAAARGAPAGRGGPPPPTQSRGGAAARSRPPAPTQRMTPATALSHQQHAAKPESYGEYAY
EEPYAEPSYEGYESYYSQPAPQPDTEYYDYGHGEAQETYESYTEDDWEGGAWGGTGGKAP
PARQGKSYREHPYGRY
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaataacagcaacaataagcgaaagaacagcgccggggatagtaaatatctg
ccggagttactggcggaaaaagacagcctggactcttcattcacgcacgccatgaaactc
ctgtctgcagagattgagagggtccagaaaggtgaacctaaaaaagagtccgagacgtat
ctggatctgttcgccaataagaacgtaagggtgaaagagagagtgctcattcctgtgaag
caatatcctcggttcaattttgtgggaaagattctgggaccacagggcagcaccatcaaa
cgtctgcaggaggacaccggtgcgaagatctccgtgttgggcaaaggatccatgagagat
aagaacaaggaagaggagctgaggaagggaggagatccaaagtatgctcacttggccatg
gagctgcacgtgcacattgaggtttttgctccaattcctgattgttacctgcgtatggcc
catgccatggatgaggtcaagaagttcctaatgcctgtggaagggatggaggacatgcac
ccggaagctttcatggatccaggttttctgaatggctctcaggatattcccgggcctggc
agaggcctccctcctggccgtggccgtggtggcccaccacccccaatgggccctaggggt
cgtggaatgctgcctcgtggagcaccacgtggaggagctccaagaggaggtccaggacgt
ggagctgcagcaaggggagccccagcaggacgcggaggtccaccaccccctacgcaatcc
agaggaggagcagctgctcgctcaagaccaccagctccgactcagaggatgacaccagca
accgctctctctcaccaacaacacgcagccaaacctgaaagctacggcgaatatgcatat
gaagaaccatacgcagagccttcctatgaagggtatgagagctactacagtcagcctgct
ccacagccagacacagagtattatgattacggtcacggagaggcacaagaaacctacgag
tcttacactgaagatgactgggaaggtggtgcttggggcggcaccggtggaaaggctcca
cctgcccgtcagggcaaatcgtatcgggagcatccatatggcagatactga
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