Labeo rohita (rohu): 127175124
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Entry
127175124 CDS
T09007
Symbol
gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04080
Neuroactive ligand-receptor interaction
lroh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127175124 (gabrb1)
04082 Neuroactive ligand signaling
127175124 (gabrb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127175124 (gabrb1)
Ion channels [BR:
lroh04040
]
Ligand-gated channels
GABA-A
127175124 (gabrb1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
127175124
NCBI-ProteinID:
XP_050981972
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All DBs
Position
13:complement(12853254..12893437)
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AA seq
483 aa
AA seq
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MMRGMLIARDHWRAGILCVLVFVALTVARSPPAHSVNEPSNMSYVKVTVDKLLKGYDIRL
RPDFGGPPVDVVMSIDISSIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRV
ADQLWVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDE
QNCTLEIESYGYTTDDIEFYWQGGSSVTGVDNIELPQFSIIDYKTLSKKAVFATGSYPRL
SLSFKLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHL
RETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAEKAAKSNEKS
RLESSKVQVDVHGNIPLTNLDLRLSGAEMLGALGDPRNTMFSYDSASIQYRKPLTGRDLY
GRPTASVERPMARKKSRLRRRAAQLKVKIPDLTDVNAIDKWSRVIFPITYTFFNLVYWLY
YVH
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgatgagagggatgctgatcgctcgggatcactggcgtgcggggatcttgtgtgtcctc
gtgttcgtggctttgacggttgctcgtagcccgccagcgcacagtgtaaacgaaccaagc
aacatgtcgtacgtcaaagtcacggtggataaactactcaaaggctacgacatccgtctc
aggcctgacttcggaggtcctccggttgatgtcgttatgagtatcgacatctccagtatc
gacatggtgtcggaagtgaacatggactataccatcaccatgtatttccagcagtcttgg
cgtgataagcgtctgtcctacacagggattcctctcaatcttactttggataaccgagtg
gctgatcaactctgggtgcccgatacttacttcataaatgacaagaaatcttttgtccac
ggggtcacagtgaagaaccgcatgattcggctgcatcctgatgggactgtgctctacggc
ctgaggataactaccacagctgcatgtatgatggatttgcgcagatacccactggatgag
cagaactgcacactggagattgaaagttatggctacaccacagatgacatcgagttctac
tggcagggaggaagttcggtgacgggggtggacaatattgagctgccgcaattctctatt
attgattataaaacactgtctaagaaagcggtgtttgctacagggtcatatcctcgtctg
tctctcagttttaaactgaagagaaacattggatatttcatcctgcagacctacatgcct
tcaaccttgatcaccatcctgtcctgggtctctttctggatcaactatgatgcttctgct
gcaagagttgcgctaggaatcaccaccgtcctgactatgaccacaatcaacactcatcta
agggagactttacccaagatcccttatgtcaaagccatagacatctatctgatgggctgc
tttgtctttgtgttcctggccttgctcgagtatgccttcgtcaactacatattctttggc
cgtggtccacatttgcagaagaaagtggcagaaaaggctgcaaaaagcaacgagaagagt
cgattggagagtagcaaagttcaggttgatgtccatggaaacattcccttgacaaacctt
gacctgcgtcttagtggagcagagatgttaggcgctcttggggacccgaggaacaccatg
ttctcttatgatagtgccagcatccaataccgtaagccccttacaggtcgggacctctac
ggccggcccaccgcctctgtcgagaggccaatggcacggaaaaagagccgccttaggagg
cgagcggctcagctaaaggtgaagattccagacctgacagacgtaaacgccattgacaag
tggtcacgtgtcatctttcccatcacctacaccttcttcaacttagtatactggctgtat
tatgtccactag
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