Labeo rohita (rohu): 127175131
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Entry
127175131 CDS
T09007
Symbol
thbs2a
Name
(RefSeq) thrombospondin-2
KO
K04659
thrombospondin 2/3/4/5
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04145
Phagosome
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127175131 (thbs2a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127175131 (thbs2a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
127175131 (thbs2a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127175131 (thbs2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127175131 (thbs2a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127175131 (thbs2a)
00536 Glycosaminoglycan binding proteins [BR:
lroh00536
]
127175131 (thbs2a)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Phagocytosis
Opsonins
127175131 (thbs2a)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127175131 (thbs2a)
Exosomal proteins of colorectal cancer cells
127175131 (thbs2a)
Exosomal proteins of bladder cancer cells
127175131 (thbs2a)
Glycosaminoglycan binding proteins [BR:
lroh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127175131 (thbs2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
CFP_C_TSP1
EGF_3
TSP1_ADAMTS
Laminin_G_3
cEGF
Motif
Other DBs
NCBI-GeneID:
127175131
NCBI-ProteinID:
XP_050981983
LinkDB
All DBs
Position
13:25085293..25109989
Genome browser
AA seq
1175 aa
AA seq
DB search
MILRRNFCLLPLLLLCIRALPQDGHVEDESIFDLFKVSSISRKTIGAKLFKGHDWDSPAY
RFIRFDHIPSVSTPALHQILKQVQNNEGFVFVATIRQDKGSKGTLIGLEAPNGSRQFEIM
SNGRANTLDLVYVVEGSQNTVSFEDVDLSDSQWKNITLYVHGENAYLYVGCSLMDSVILD
EPFYEHLQPEGGQMFVAKGSIRENHFRGLLQNVQFIFDTPVESILRNKGCEIAKPEEVNL
VNESTETVSVGTAISTNFIGQKEKMAADMCERSCEEITNMVQELKGLRIVVGNLIDGLQK
VTEENTVMKEVLGNMKNIKDKRMCWQDGRLFEDKEDWVVDSCTKCTCQESKVVCHQITCP
PVSCASPTFLDGECCPVCLPKDSEDGWSPWSEWTECTVTCGTGTQQRGRSCDATSNPCSG
PSIQTRRCNLGKCDSRVRQDGGWSLWSPWSSCSVTCGEGQITRIRHCNSPVPQLGGKDCE
GSGRETKKCEAKPCPIDGAWGPWSPWAICSATCGGGTRTRTRVCNSPRPQYGGKKCPGES
KDTDSCNKHDCPVDGCLSNPCFGGVDCTSSPDGSWECGPCPVGFRGNGTLCEDVNECDMV
PDLCFKSGESQRCVNTDPGYHCLPCPPRYKGNQPFGMGVEAANLNKQVCEQENPCKERTH
NCHRSAECIYLGHFSDPMFKCECKIGYAGDGIICGEDSDLDGWPNQNLVCGANQSYHCKK
DNCPNLPNSGQEDFDKDGQGDACDKDDDNDGIMDEADNCPLLYNPRQFDYDKDLVGDRCD
NCPYEHNPAQIDTDGNGEGDACAVDIDGDEVLNEQDNCPYMYNTDQKDTDMDGVGDQCDN
CPLLHNPAQADSDNDLVGDECDNNQDIDEDGHQNSLDNCPYIPNANQADHDKDGKGDVCD
FDDDNDGIPDDKDNCRLVANKDQLDSDGDGRGDACKDDFDNDSIPDFLDVCPENDAISNT
DFRKFQMVHLDPKGTTQIDPNWVVRHQGKELVQTANSDPGIAVGFDEFNAVDFSGTFYVN
TDRDDDYAGFVFGYQSSSRFYVVMWKQITQTYWEVIPSKAFGISGVSLKVVNSTTGTGEH
LRNALWHTGDTPGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGKQIMADS
GPVYDQTFAGGRLGLFVFSQELVYFSDLKYECRDN
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgatactcaggagaaatttctgcttgctgcctttgctgttattatgcatcagagcacta
cctcaagatggccatgtggaagacgaatccatctttgaccttttcaaagtcagcagcatc
agcagaaagacgattggtgccaagctcttcaagggtcacgactgggactcgcctgcgtac
cgcttcatccgcttcgatcacatcccttctgtgagcaccccggccctccatcagatccta
aagcaggtccaaaacaatgagggctttgtgtttgtggccaccataagacaggacaagggc
tccaaaggaaccctgatcggtctggaggctcccaatgggagccgtcagttcgagattatg
tccaatgggcgcgccaacacgctggatctggtctacgtggtcgagggatctcaaaatacg
gtgtcctttgaggacgtggacttgtctgattcgcagtggaagaacattacgctgtacgtt
cacggagagaacgcttacctgtatgtaggctgcagcctcatggacagtgtgatcctagat
gagcctttctatgagcatctgcagccagagggaggtcagatgtttgtggccaagggatct
attagggaaaaccacttcaggggtttactacagaatgtacagttcatttttgacacacca
gtagagagcatcctgagaaacaaaggttgtgagattgccaaacctgaggaagttaacctg
gttaatgaaagtacggagactgtgtctgtcggtacggccatctccaccaatttcattggg
cagaaggagaaaatggcagcggacatgtgcgagcgttcctgtgaggaaatcaccaacatg
gtccaggagctcaaaggtctccgtattgttgtaggcaatctcatcgatggcttgcagaaa
gtgactgaggagaacactgtgatgaaggaggtgctggggaacatgaagaacatcaaagac
aagcgcatgtgctggcaagacggccgtctctttgaggataaggaggactgggttgtggac
agctgcaccaagtgtacctgtcaggaatcaaaggttgtatgccatcagatcacatgtcct
ccagtatcctgtgccagccccactttcctagatggtgaatgctgtccagtgtgtctgcct
aaagacagcgaggatggctggtcgccttggtctgaatggacagagtgtaccgtcacatgt
ggaacaggcacccagcaaagaggcaggtcatgtgacgccacaagtaacccctgcagtggc
ccctccatccaaacccgcagatgcaacttgggaaaatgcgacagccgtgtccgtcaagat
ggtggttggagtttgtggtccccctggtcgtcatgctctgtgacgtgtggagagggacag
atcacgcgaattcgccactgtaactcccccgtccctcaactgggaggaaaggactgcgaa
ggcagcgggagagagacgaaaaaatgtgaagccaaaccctgtccgattgatggagcttgg
ggcccatggtctccttgggcgatctgctccgccacctgtgggggaggaacaaggacaaga
acacgcgtgtgtaacagccctcgtccacagtatggcggcaagaaatgcccaggagagtcc
aaagacactgattcctgcaacaaacatgactgccctgttgatggttgtctatctaacccg
tgtttcgggggtgttgactgcaccagctcccctgacggctcatgggagtgcgggccctgc
cctgtcggtttccgtggcaatggaacattgtgtgaggatgtgaatgagtgtgatatggtg
cctgatctttgctttaaaagtggtgaatcccagcgctgtgtcaacacagatccaggatac
cactgcttgccttgccctcctcgatacaaaggcaatcagccttttggaatgggagtggag
gctgccaatctaaataaacaggtttgcgagcaagaaaacccctgcaaagagaggactcac
aactgccacaggtctgctgagtgtatctaccttggccacttcagtgaccccatgttcaaa
tgcgagtgtaagattggctatgctggtgacggcatcatctgcggtgaggactctgacctt
gatggctggcccaatcagaacctggtgtgtggagccaaccagtcctatcattgcaaaaag
gacaattgtcccaaccttccaaactcaggccaagaggactttgataaagatggtcaagga
gacgcctgcgacaaagatgacgataatgatggaatcatggatgaggcagacaactgtcct
ctactgtacaatcccaggcaattcgactacgataaagatctcgtcggtgatcggtgcgat
aattgtccatatgaacacaaccccgctcagatcgacacagatggtaatggcgagggagat
gcctgtgctgtagacattgatggagatgaggttctgaatgagcaggataactgcccatac
atgtacaatactgaccagaaggacacagatatggatggagtgggtgatcaatgtgataac
tgtcctctgctgcacaaccctgcccaggctgactcagataatgaccttgttggcgacgag
tgcgacaacaatcaggacattgatgaggacggccaccagaacagcctggataattgtccc
tacattcccaatgccaatcaggccgaccatgacaaagatggaaaaggagacgtttgtgat
tttgatgacgataatgatggcattcctgatgacaaggacaactgcagactggtggctaat
aaagatcaactagactctgatggggatggaagaggtgatgcctgcaaagatgattttgat
aatgacagcattccagactttttggacgtgtgccctgagaacgacgccatcagtaacact
gacttccggaagtttcagatggtgcatttggatcccaaaggaactacacaaattgatccc
aactgggtggtcagacatcagggcaaagagttggttcagacggccaattctgaccccggt
attgctgtgggtttcgatgagttcaacgctgtggatttcagtggcactttctatgtcaac
actgaccgagatgatgattatgctgggtttgtgttcggctatcagtccagcagtcgattt
tatgtggtaatgtggaagcagataactcagacgtactgggaagttattccttcaaaagcc
tttggcatctcaggggtttctctgaaagtggtcaactctaccacgggcacaggagagcac
ctgcgtaacgccctctggcacactggtgacactcctggacaggtccgcacactgtggcac
gacccgaagaatatcggctggaaggattatactgcgtacaggtggcatctcatccacaga
cccaagacaggattcatcagagtggtggtttatgaggggaaacagatcatggcagactcg
gggccagtttatgatcaaaccttcgcaggagggagattaggactcttcgtgttttcccaa
gaacttgtttacttctctgatctcaagtatgagtgtcgagataactaa
DBGET
integrated database retrieval system
