Labeo rohita (rohu): 127175171
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Entry
127175171 CDS
T09007
Name
(RefSeq) toll-like receptor 4
KO
K10160
toll-like receptor 4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04145
Phagosome
lroh04217
Necroptosis
lroh04620
Toll-like receptor signaling pathway
lroh04621
NOD-like receptor signaling pathway
lroh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127175171
09143 Cell growth and death
04217 Necroptosis
127175171
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127175171
04621 NOD-like receptor signaling pathway
127175171
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127175171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127175171
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lroh04054
]
127175171
04090 CD molecules [BR:
lroh04090
]
127175171
00536 Glycosaminoglycan binding proteins [BR:
lroh00536
]
127175171
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Phagocytosis
Toll-like receptors
127175171
Pattern recognition receptors [BR:
lroh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
127175171
CD molecules [BR:
lroh04090
]
Proteins
127175171
Glycosaminoglycan binding proteins [BR:
lroh00536
]
Hyaluronan
Cell surface receptors
127175171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_1
LRR_14
LRR_5
TIR_2
LRR_6
LRR_9
LRR_NXF1-5
LRR_R13L1-DRL21
ThsB_TIR
DUF4327
Motif
Other DBs
NCBI-GeneID:
127175171
NCBI-ProteinID:
XP_050982049
LinkDB
All DBs
Position
13:10964269..10967595
Genome browser
AA seq
818 aa
AA seq
DB search
MNFFTVSLIVYFSVGAGKSCTETTENQHYTCTGRNLSYIPSSIPSSIQTLDFSFNVLKRL
RKTVFPVLSFLRVLDLSRCQIKHIENDAFHNVRNLTTLILTGNPITYFGPGGLNSLHNLQ
RLVLVDVGISSLQLQINNLTKLQELRVGTNNIQSMSLPPFMSSFKDFSLLDLHANNISVI
KTDHTVLLREIGRNMTLILSRNPLSYIEPGAFKNIHLCELDIRSVFPSFAAQEIGLKALY
GLNVKRLKFGKYNGGFRFHFSDTDYLYGLCSIYFQEVYYYIMERPNQPISFLHCMINATT
VAVIGGVINKMEYVPFREIKELHLISVKLSTLPGKQLSHLRALEKVVITHNSAPIWADAF
IDMPNLQYLDLSSNQITLYKCCTTLFSGTPQIRYLNLSQNIDIGFDLGGFDALASLEILD
LHRTNVERVGYLPVLSSLKYLRYLDVSYSSITFINIFSFYRLKNLNVLKIAGNKFQGDVA
RYLFNNLTLLEHLDMSYCHMVELHPSSFKNLQRLRLLNLRGNHLMTVDFLAYPSLKQLTS
VYVNKNSITTIPLHVLQKLPANLSEFDLSSNPIYCSCSQTDFTLWIIQNQNILKQPENIF
CKTFSQSLDFRATDFDIDSCVHMKRLAIVLSVFFITVVVLLSFLVYRFQFYLQYCCILLR
GYRSPGQQECSYDAFVIFSSYDEVWVMNELMENLENGVPPIQLCLHMRDFQAGKSIASNI
IDEGIMGSRKIIVVVSQHFIDSAWCRFEFELAQSRFMMERNANIIIIILEDVEERKTKKV
LGLHKHLKKNTYLKWSRDPLSNMRFWIRLRKAIIATNQ
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcttcactgttagtttaattgtatatttttctgttggggctggaaaatcgtgc
acagaaactactgagaatcagcactatacatgcacaggaagaaacctcagctacatacca
tccagtattccttcctccattcagactctggatttcagttttaatgttttgaaacgctta
cggaagaccgttttcccagttttgtcttttctacgagttctcgatctgtcaagatgccaa
atcaagcacattgaaaatgatgctttccacaatgtgaggaatttgactactttaatcctc
actggaaacccaattacatattttggacctggaggcttgaattctttacataatctacaa
agactagttcttgtggatgttggtatctcatctttacagcttcaaataaataatctaacc
aagctgcaggagcttagagtcgggacaaataacatccagtccatgtctctccctccattc
atgagctccttcaaagacttcagtttacttgatctacatgccaataatatatctgtcatc
aaaactgatcacacagttttgttgcgagagattggcagaaacatgactttgattctctct
aggaatccgttatcatacattgaaccaggagcatttaaaaacattcatctctgtgaactg
gacatccgatctgtctttccttcatttgctgctcaggaaattggtcttaaagctctgtat
ggtcttaatgtcaaaaggctgaaatttggaaagtacaacggcggtttcagatttcacttt
tcagatactgattatttatatggtctgtgctctatttatttccaggaggtatattactac
attatggaaagacctaatcagccaatttctttcttacactgtatgattaatgccacaact
gtagcagtaatcggaggtgtaattaataaaatggagtatgtaccttttcgtgaaatcaaa
gagcttcacttgatttccgttaagttaagtactttgccaggtaaacagctttcacatctc
cgtgctttagaaaaagtagtaattacacacaacagtgcacctatttgggctgatgcgttt
atagatatgcctaaccttcagtatttggatttaagctctaaccagattaccttatataaa
tgctgtaccacacttttcagtggcacccctcaaatcagatatttgaatttgagtcaaaat
atagatattggttttgatttgggaggatttgatgcacttgcttcccttgaaattttagat
ttgcaccgtacaaatgttgaacgtgttggataccttccagttttgtccagcttaaagtat
ttgaggtatctggatgtttcttattcaagtatcacttttattaatatattcagcttctat
agactgaagaatcttaatgttctcaagattgctggcaataaatttcagggtgatgtagca
agatatttatttaataatctcactttactagagcaccttgacatgtcatactgtcatatg
gtagagttacacccaagctcattcaaaaatcttcagaggcttagacttttgaatctcaga
ggtaaccatttaatgactgtagattttctggcctacccaagcctgaagcaattaacatca
gtttatgtcaataaaaacagcattacaaccatcccacttcatgttctccaaaagctgccc
gcaaacctttcagagtttgatttgtcctctaaccccatctattgctcctgctcccagaca
gactttactttgtggattatccaaaatcagaacattttgaagcaaccggaaaatattttc
tgtaaaaccttttcacaaagcttagattttagagcaacagactttgacattgacagctgt
gtgcacatgaaaagactcgcaattgttttatctgtatttttcattacagtcgtagttctt
ttatcattcttggtttataggttccagttttatcttcagtattgctgtattttactgaga
ggctacagatcacctggtcaacaagaatgttcctatgacgcatttgtgattttctccagc
tatgatgaagtctgggtcatgaatgagctgatggagaatctggagaacggtgttccacct
attcagctttgccttcatatgagggactttcaagcagggaagtccatcgcctccaacatt
atcgatgaaggaataatgggcagtcgtaaaatcattgtggtcgtgtctcaacacttcatt
gacagtgcctggtgtcgctttgagtttgaattagctcagtctcgctttatgatggagcgc
aatgccaacatcatcataatcattctggaagatgtcgaagagagaaagactaagaaagtg
cttgggcttcataaacatctaaagaagaacacgtacctgaagtggagcagagaccctttg
agtaacatgagattctggatacgccttaggaaagccattattgccacaaaccaataa
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