KEGG   Labeo rohita (rohu): 127175171
Entry
127175171         CDS       T09007                                 
Name
(RefSeq) toll-like receptor 4
  KO
K10160  toll-like receptor 4
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04145  Phagosome
lroh04217  Necroptosis
lroh04620  Toll-like receptor signaling pathway
lroh04621  NOD-like receptor signaling pathway
lroh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127175171
  09143 Cell growth and death
   04217 Necroptosis
    127175171
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    127175171
   04621 NOD-like receptor signaling pathway
    127175171
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127175171
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lroh04131]
    127175171
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:lroh04054]
    127175171
   04090 CD molecules [BR:lroh04090]
    127175171
   00536 Glycosaminoglycan binding proteins [BR:lroh00536]
    127175171
Membrane trafficking [BR:lroh04131]
 Endocytosis
  Phagocytosis
   Toll-like receptors
    127175171
Pattern recognition receptors [BR:lroh04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   127175171
CD molecules [BR:lroh04090]
 Proteins
  127175171
Glycosaminoglycan binding proteins [BR:lroh00536]
 Hyaluronan
  Cell surface receptors
   127175171
SSDB
Motif
Pfam: LRR_8 LRR_4 TIR LRR_1 LRR_14 LRR_5 TIR_2 LRR_6 LRR_9 LRR_NXF1-5 LRR_R13L1-DRL21 ThsB_TIR DUF4327
Other DBs
NCBI-GeneID: 127175171
NCBI-ProteinID: XP_050982049
LinkDB
Position
13:10964269..10967595
AA seq 818 aa
MNFFTVSLIVYFSVGAGKSCTETTENQHYTCTGRNLSYIPSSIPSSIQTLDFSFNVLKRL
RKTVFPVLSFLRVLDLSRCQIKHIENDAFHNVRNLTTLILTGNPITYFGPGGLNSLHNLQ
RLVLVDVGISSLQLQINNLTKLQELRVGTNNIQSMSLPPFMSSFKDFSLLDLHANNISVI
KTDHTVLLREIGRNMTLILSRNPLSYIEPGAFKNIHLCELDIRSVFPSFAAQEIGLKALY
GLNVKRLKFGKYNGGFRFHFSDTDYLYGLCSIYFQEVYYYIMERPNQPISFLHCMINATT
VAVIGGVINKMEYVPFREIKELHLISVKLSTLPGKQLSHLRALEKVVITHNSAPIWADAF
IDMPNLQYLDLSSNQITLYKCCTTLFSGTPQIRYLNLSQNIDIGFDLGGFDALASLEILD
LHRTNVERVGYLPVLSSLKYLRYLDVSYSSITFINIFSFYRLKNLNVLKIAGNKFQGDVA
RYLFNNLTLLEHLDMSYCHMVELHPSSFKNLQRLRLLNLRGNHLMTVDFLAYPSLKQLTS
VYVNKNSITTIPLHVLQKLPANLSEFDLSSNPIYCSCSQTDFTLWIIQNQNILKQPENIF
CKTFSQSLDFRATDFDIDSCVHMKRLAIVLSVFFITVVVLLSFLVYRFQFYLQYCCILLR
GYRSPGQQECSYDAFVIFSSYDEVWVMNELMENLENGVPPIQLCLHMRDFQAGKSIASNI
IDEGIMGSRKIIVVVSQHFIDSAWCRFEFELAQSRFMMERNANIIIIILEDVEERKTKKV
LGLHKHLKKNTYLKWSRDPLSNMRFWIRLRKAIIATNQ
NT seq 2457 nt   +upstreamnt  +downstreamnt
atgaatttcttcactgttagtttaattgtatatttttctgttggggctggaaaatcgtgc
acagaaactactgagaatcagcactatacatgcacaggaagaaacctcagctacatacca
tccagtattccttcctccattcagactctggatttcagttttaatgttttgaaacgctta
cggaagaccgttttcccagttttgtcttttctacgagttctcgatctgtcaagatgccaa
atcaagcacattgaaaatgatgctttccacaatgtgaggaatttgactactttaatcctc
actggaaacccaattacatattttggacctggaggcttgaattctttacataatctacaa
agactagttcttgtggatgttggtatctcatctttacagcttcaaataaataatctaacc
aagctgcaggagcttagagtcgggacaaataacatccagtccatgtctctccctccattc
atgagctccttcaaagacttcagtttacttgatctacatgccaataatatatctgtcatc
aaaactgatcacacagttttgttgcgagagattggcagaaacatgactttgattctctct
aggaatccgttatcatacattgaaccaggagcatttaaaaacattcatctctgtgaactg
gacatccgatctgtctttccttcatttgctgctcaggaaattggtcttaaagctctgtat
ggtcttaatgtcaaaaggctgaaatttggaaagtacaacggcggtttcagatttcacttt
tcagatactgattatttatatggtctgtgctctatttatttccaggaggtatattactac
attatggaaagacctaatcagccaatttctttcttacactgtatgattaatgccacaact
gtagcagtaatcggaggtgtaattaataaaatggagtatgtaccttttcgtgaaatcaaa
gagcttcacttgatttccgttaagttaagtactttgccaggtaaacagctttcacatctc
cgtgctttagaaaaagtagtaattacacacaacagtgcacctatttgggctgatgcgttt
atagatatgcctaaccttcagtatttggatttaagctctaaccagattaccttatataaa
tgctgtaccacacttttcagtggcacccctcaaatcagatatttgaatttgagtcaaaat
atagatattggttttgatttgggaggatttgatgcacttgcttcccttgaaattttagat
ttgcaccgtacaaatgttgaacgtgttggataccttccagttttgtccagcttaaagtat
ttgaggtatctggatgtttcttattcaagtatcacttttattaatatattcagcttctat
agactgaagaatcttaatgttctcaagattgctggcaataaatttcagggtgatgtagca
agatatttatttaataatctcactttactagagcaccttgacatgtcatactgtcatatg
gtagagttacacccaagctcattcaaaaatcttcagaggcttagacttttgaatctcaga
ggtaaccatttaatgactgtagattttctggcctacccaagcctgaagcaattaacatca
gtttatgtcaataaaaacagcattacaaccatcccacttcatgttctccaaaagctgccc
gcaaacctttcagagtttgatttgtcctctaaccccatctattgctcctgctcccagaca
gactttactttgtggattatccaaaatcagaacattttgaagcaaccggaaaatattttc
tgtaaaaccttttcacaaagcttagattttagagcaacagactttgacattgacagctgt
gtgcacatgaaaagactcgcaattgttttatctgtatttttcattacagtcgtagttctt
ttatcattcttggtttataggttccagttttatcttcagtattgctgtattttactgaga
ggctacagatcacctggtcaacaagaatgttcctatgacgcatttgtgattttctccagc
tatgatgaagtctgggtcatgaatgagctgatggagaatctggagaacggtgttccacct
attcagctttgccttcatatgagggactttcaagcagggaagtccatcgcctccaacatt
atcgatgaaggaataatgggcagtcgtaaaatcattgtggtcgtgtctcaacacttcatt
gacagtgcctggtgtcgctttgagtttgaattagctcagtctcgctttatgatggagcgc
aatgccaacatcatcataatcattctggaagatgtcgaagagagaaagactaagaaagtg
cttgggcttcataaacatctaaagaagaacacgtacctgaagtggagcagagaccctttg
agtaacatgagattctggatacgccttaggaaagccattattgccacaaaccaataa

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