Labeo rohita (rohu): 127175205
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Entry
127175205 CDS
T09007
Symbol
psme4a
Name
(RefSeq) proteasome activator complex subunit 4A isoform X1
KO
K06699
proteasome activator subunit 4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
127175205 (psme4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lroh03051
]
127175205 (psme4a)
Proteasome [BR:
lroh03051
]
Eukaryotic proteasome
Regulatory particles
PA200
127175205 (psme4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_PSME4_mid
HEAT_PSME4
PSME4_C
HEAT
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
127175205
NCBI-ProteinID:
XP_050982091
LinkDB
All DBs
Position
13:25117226..25149391
Genome browser
AA seq
1874 aa
AA seq
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MTVSNIIEVEEPHLGRCNMKKEATELLGFVPQKDIVYNELLPYKDKLDEESNEILAQIKG
NLGRAVQLREIWPGVLFWTRKLSTYMRLYGRKFSKEDHVHFIKLLYELVTIPKLEISMMQ
SFARLLITLLKKKELLSREDLELPWRPLYELQDRILYSKTEHLGLNWFPSSLRPRSSSKH
IIVKLAQRCSVEAILKALIKSCRPYFPESATQEMLDEWRPLMCPFDVTMQKAMGYFELFL
PTTLPPELHDKGFKLWFDELISLWVSVQNLPSWEVNLVSLFARLANDNIGYIDWDPYIPK
IFTRILRSLNLPVGSSQMLVSRYLTNAYDISHVVIWISALLGGPSKQTQTQLSGLFNSIA
SFFHPSNHGRWLMKLMKLVQRLPASVVKRLHRERYRTPTWLTPVPESHLLSEQDITDFVE
SMKQPVLLAMFSKTGSLDAAQALQNLALLRPELVIPPVLEKTYPAMETLTEPHQLTATLS
CMIGVARSLVAGGQRFPEGPTHMLPLLMRALPGVDPNDFSKCMITFQFLATFVTLVPLVD
CSAAVQTRNDLTQVEKELCSASAEFEYFVLQFVDRCFALIDTSTLEQTREEMETEKMTHL
ESLVELGLSSTFSTILTQCSMEIFQVALEKVFNFATTNIFETHVAGRMVANMCRAATKCH
PAEALKLFLPHCCNVILQISAYEEVLNEEELDKELMWNLQLLSEVTRVDGDQLLLYRSQL
VQILQLTLHLKCKQGYNLACKLLYHILRSMSLIYPREYCSMPGGVQQHTDAYLPIKDWGR
PGDLLNLGIQWHVPSTEEKEFVFYLLDLLLKPELQHLQKHAQGEQDISRDDVLQSLSIVH
NCLLGASSLLPPLHGEPVPEMINSMVQLCETSVYAGVDYDLSRENYREDICKMIRPLLHH
TLEHSEDDIKSLFSIIKIINDLLHFKGSHKHEFDSRWKSFSIIKKSMENKLHGSKQHIRA
LLIDRVMLQHELRNLTIEGCCYRSVHQDLIKDLLRLSTSRYSQVRSKAQTVLFTALGTYS
LCCRDIIPAVLEYLDPDRTDVTQQQFKGALYCLLGNHCGICLANLQYWDCIALTWPAIVR
SGMSPCMSLEKPSVVRLFDDLADKIHRQYENIGIDFSIPESCVEVALKMMKSSHPEPTPC
AASEQEELEGRKRQEQKNKDSVQKYEKIVVDLLDCLYDRNLPWKFEQIAIGFLSLMLRDD
HPLPSSAILFFVESLNHDSLLVRNGAISAVGGILKQLKRPHKKVAVNPFDISELKTSLQS
CGDKALDCLLVGDRPDNQWLQYDSSRLPRSQEDWNECCFIEKTHWGYSTWPRKLMLYAPP
EEQPKQGKTREELNESERIIYDHFSDQQFIDQFIQYLSLEDRKGKDKFSPRRFCLFKGLF
RNFDDAFLPLLKPHMERLVADSHESTQRCVAEIISGLIRGSKHWSYSKVEKLWALLCPLL
RKALSNITIETYTDWGTCIATACESRDPRKLHWLFEMLMESPVTGEGGSFVDACRLYVLQ
GGLAQQEWRVPELLHRLLQFLEPKLTQVYKNVRERIGSVLTYIFMIDVNLPHTQPTTSPR
IAEFTERVLVRLKPLTEGEEEIQNHVVEENTEGDQDERTQAIRLLKTVLKWLMTSAGRSF
SSVVPEQLRLLPLLFKIAPVENDDSYDEMKRDAKTCLSLMSQGLLYSEQIPQVLNALEEI
SRSSSWHARYTVLTYLQIMVFYNLFTFLSDAEAVSDVRALVLHLLEDEQLEVREMAATTL
SGFLQCNFLSIDEPMQAHFEALSKTRLPKRKRRELGSVVDTIPSADLVRRHAGVLGLSAC
ILSSPYDVPTWMPQILMDLSAHLNDTQPIEMTVKKTLSDFRRTHHDNWQEHKQKFTDDQL
LVLTDLLVSPCYYA
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atgactgtctctaatataatcgaagtggaggagccacatctggggaggtgtaatatgaaa
aaagaagcaaccgaattattagggtttgttccgcaaaaagatattgtttacaacgaactt
ttgccttacaaggacaaactagacgaagagtccaatgaaattttggcacagattaaagga
aacctcggcagagcagtccaactcagagagatatggccaggtgtcctgttttggacgagg
aaactttccacgtatatgcgactgtatggaaggaagttcagcaaagaggaccatgtgcac
ttcatcaagctgctgtacgagctggtcaccatccccaaactggagatcagtatgatgcag
agcttcgcccgtctcctcatcaccctgctgaagaagaaagagttgctttcaagagaggac
ttagaattgccatggcggcccctatatgaattgcaagacaggatcctgtattcaaaaacg
gagcacctcggcctgaactggtttcccagttctctgcggcctcgctcttcctctaaacac
ataatcgttaaacttgctcagaggtgctcagtggaagcaattctgaaggctttaatcaag
agctgcagaccatattttccggaatcggccacacaggagatgctcgatgagtggagacct
ctgatgtgtccatttgacgtgacaatgcagaaggcgatgggatattttgagctcttcctg
cccaccactctccccccagagctgcatgataagggcttcaaactttggtttgatgaattg
ataagcctgtgggtgtctgtgcagaaccttccaagctgggaagtgaatcttgtcagtctt
tttgcacgactggcaaatgacaacattggttacatagattgggacccttatataccaaag
atcttcacaaggatcttaaggagtcttaatcttcctgtaggatccagtcagatgctggtt
tccagatatctgacaaatgcctatgacatcagtcatgttgtcatctggatttctgctttg
ctgggagggcccagcaagcagacccagacccagctcagtggccttttcaacagtatcgcc
tcgtttttccacccttctaaccacggccgctggctgatgaaactcatgaagctcgttcag
cgattacctgccagtgttgtgaaacgtctgcatcgagaacgttaccggacgccaacatgg
ctgactcccgttccagagagccaccttctcagtgagcaggacatcacagactttgtggaa
agtatgaagcagcctgttctgctggcaatgtttagcaaaactggcagcctggatgctgcc
caggccctgcaaaaccttgccctgctcagacctgagctagtcattcctccagtgctggag
aagacatatcccgccatggagaccctcactgagcctcaccagctgaccgccactctaagc
tgtatgattggcgtggcgcggagcctggtggccgggggccagaggtttccagagggtccc
acacacatgttgcctctccttatgagggctctgcctggggtcgaccccaatgacttcagc
aagtgcatgataacattccaatttttagcgacttttgttactcttgtgccattggtggac
tgttcagctgctgttcagacaagaaatgacctcacacaggtggaaaaagagttgtgctct
gcctcagcagagtttgagtattttgttcttcaatttgttgatagatgttttgcactgatc
gacacgagtactctggaacagacccgggaggagatggagacagaaaaaatgactcatctg
gagagtctagtggagctaggcctgtcctccacattcagcactatcctcacgcaatgctct
atggaaatatttcaggtggctctggaaaaagtctttaactttgccactacaaacattttt
gagactcacgtggctggacggatggtggcaaacatgtgccgagctgcgaccaagtgtcac
ccggcagaggctctgaaactctttttgcctcactgctgtaatgtcatattacaaatctca
gcctatgaagaagtattaaatgaagaagagctggataaagagctgatgtggaacctccag
ctgttgtctgaggtgacccgtgtggatggtgatcagctgttactctacaggtctcagctg
gtgcagattcttcagttaactctgcatctgaaatgcaagcagggctacaatctggcctgt
aagctgctctatcatatcctgcgctccatgtccctcatctatcccagagagtattgcagc
atgcccggcggtgtccagcagcacactgacgcataccttccaattaaggactggggtcgg
cctggagacctattgaatctgggcatccagtggcacgtgcccagcacagaggagaaagag
tttgttttctacctgctggatctgctgttaaagcctgaactccagcatctgcagaagcat
gcacagggagaacaagacataagcagagatgatgttctacagagtctgtccattgttcat
aactgccttctgggagcaagcagccttctgcccccactgcatggagaacctgtgccggag
atgataaacagtatggttcagctgtgcgagacaagcgtttacgctggagtagactatgac
ttgtctagagagaactacagagaggacatctgtaagatgattagacctctactacaccac
actctagagcactcagaggatgacatcaaatccctcttctcgattataaagatcatcaat
gacctgctgcactttaaaggctcacacaaacatgaatttgactcgcgctggaaaagtttc
agtattattaagaagtccatggagaacaagcttcatggcagtaaacagcacattcgagct
ctactcatagacagagtcatgttgcaacatgagttaagaaatctgaccattgagggatgt
tgctacaggagtgttcatcaggacttgataaaagacctactcagattgtccaccagcagg
tacagtcaggtgaggagtaaagctcagactgtgctgttcaccgcattgggaacctacagc
ttatgctgcagagacatcatccctgcagtgctggagtatctggacccagaccgcactgat
gtcacccagcagcaattcaaaggtgccttgtactgcctgttagggaaccactgtggaatc
tgtcttgctaacctgcagtactgggactgcattgctctcacgtggcctgccattgtacgt
tctggtatgagcccctgcatgtctctcgagaagccttcagtcgtcaggctctttgatgat
ctggctgacaaaatccaccgccaatatgagaacatcggaattgacttttctatcccagag
agttgtgtggaggttgctctaaaaatgatgaaatctagtcacccagaaccgactccatgt
gctgcctctgaacaggaggaactggagggaagaaagaggcaggaacagaaaaacaaagac
tcggtgcagaagtatgagaagatagtggtggatcttttggactgcctttacgatcgaaac
ctgccctggaagtttgagcagatagctatcggctttctttctctgatgctgagagatgac
caccccttgccttcctctgccatcctatttttcgttgagagcctgaatcacgactcgctc
ctagttcgcaatggtgcaatatcagcagtaggtggaattctaaagcagctcaagagacct
cacaagaaagtagcagtgaatccctttgacatatctgagctcaaaacatccctacagtca
tgtggtgataaagctctagactgtctgttggtgggagacaggcctgacaaccagtggctg
cagtatgacagcagcaggttgccacgctcccaggaggactggaatgaatgctgcttcatt
gagaaaacccactggggctattccacgtggccaaggaagctgatgctctatgcccctcct
gaagaacagcccaaacagggcaaaacaagagaagagttgaatgagagtgaacggattata
tacgatcatttctcagaccagcagttcatagatcagttcattcagtatttgtctttggag
gacaggaagggaaaagataaattcagcccaagacgtttttgcctcttcaagggtcttttt
cggaactttgatgatgccttcctgcctctgctgaagcctcatatggagcgtctggttgcg
gattcccatgagagcacccagcgctgtgtggcggagatcatctctggactcatcaggggc
tccaaacactggagctacagcaaggtggaaaaactgtgggctttgctgtgtccacttctc
cgtaaagctctttccaatatcaccattgagacgtatacggactggggcacctgtatcgcc
actgcctgtgagagccgagacccacgaaagctgcattggctgtttgagatgctgatggaa
tcaccggtcacaggagaaggaggctcgtttgtggacgcctgccgtctgtatgtgctgcag
ggaggtcttgctcagcaggaatggagagtcccagagctgcttcacagattactacagttt
ctagagcccaaactcactcaggtctacaagaatgtacgcgaacgcatcggcagtgtgctc
acctacatctttatgattgacgtgaacctgccacacactcagcctaccacgtccccgcgc
atcgcagagttcacagagcgtgtgttggtcaggctcaaacctttaacagagggcgaggag
gagatccaaaaccacgtggtagaggaaaacacagagggagatcaagacgagaggacacaa
gccatcagactactcaaaactgtgttgaagtggttgatgaccagtgctggacgctccttc
tcttctgtggtcccagaacagcttcgtcttctccctctactatttaaaattgctcccgtg
gagaatgacgacagctatgatgagatgaagagagatgctaagacgtgtctgtctctcatg
tcccaggggctgctgtattccgagcagatcccacaagtcctcaatgcacttgaggagatt
tcaaggagcagctcatggcatgcacgttacaccgttctcacctacctgcagatcatggtt
ttctacaatcttttcaccttcctcagtgatgctgaggccgtcagtgatgtaagagcgctg
gtactgcacctactggaggatgaacaacttgaggtgagggagatggccgccaccacttta
agtggattcctgcagtgtaattttctcagcattgatgaacccatgcaggcccatttcgag
gccctgagcaagacccgtctgcccaagcgtaagaggagagagctgggctcagtggtggac
acaatcccttctgctgacctggtgcggcgacatgcaggtgtattgggtctgagtgcctgc
atcctgtctagcccgtatgatgtgcccacctggatgccccagatcctcatggacctgagt
gcccacctcaatgacacacagcctatagagatgaccgtgaagaaaaccctgtcagatttc
cgtcgcactcatcatgataactggcaggaacacaagcagaagttcacagatgaccagctg
ctggtgctcacagatctgctggtgtccccctgttactacgcctag
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