Labeo rohita (rohu): 127175246
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Entry
127175246 CDS
T09007
Symbol
rab11fip5a
Name
(RefSeq) uncharacterized protein rab11fip5a isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127175246 (rab11fip5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127175246 (rab11fip5a)
Membrane trafficking [BR:
lroh04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
127175246 (rab11fip5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Motif
Other DBs
NCBI-GeneID:
127175246
NCBI-ProteinID:
XP_050982153
LinkDB
All DBs
Position
13:11500383..11530604
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AA seq
1662 aa
AA seq
DB search
MSLVKNDEEQRWVPTHVQVTVLRARGLRSKGKHGTSDVYTIIQLGKEKYSTCVMEKTTDP
EWAEECSFELQPGILEEGGRDAYPPGSGDLTLTVMHRALIGLDVFLGQAVIPLDKAFQER
KCMKNEWCRLHSKTGKKEKERGELQLTVQFTRHNLTASMYDLSMKDKPRSAFDKLRERMR
AKKRSSEEDSSSAIVPGGYGALARMRGRLPSDGGGEEDYEDDEGGEARRSKMRSFFLRGK
LRKSSDTRSSTSLGSESSESSSRGGSLSPTAGISVVVSDLSNSPSNSSNLTADNSPDHTV
APSPQVSPVRHVMYDISLPVPHSMTSENDTPILLPSVCVNGNPVETSPLTHHPPSLVLQQ
PRPESTKPVTQSGQPQANTLPAKPQKAQPKSHETQLPKSESKPRPEPLLPALGVLQKGSL
SLSLQNLSRRGEEKQNGGPVDGRRWSFDKPGEEEKAAIVAALEQAGRVTDEVEMETVIPA
GETETQNKKRRGLFSHGKGDSAGKGPIASKEEAEHAQPLVEVKHKGWFSSKDSHSKPSPL
VSPQSHSSAGTISPIVPLTFNDPSQSMADKNANPFTSPPPLFDANPFLPHTQQNPFIQEI
PSTTPDVPSLFSSTQSQSGTNATPDLLSNGNQKEVSQKNISFDPLFSHFEGLTEKDGFEY
FVKDRLKSEEVNETTNSVTPPAVLMKTSNQEPSGALGGLMVLDTNYLTDLGQTASASTVE
TSKDTTADTPLVSGSDDNFMSSSSNKPDLAAHGAHGFPEFDLNSSEISLPENSSLEFSEL
NTLARPYPALSPHSKKEESSDDTTLEEHLENKQNTKSDVPQPSVSEADTGDFPPSISLEL
SEGSVSSETLQRPEMLDFTKDIESVTVHEDPLPFFADDSSGDALEQSTVISDSLGGDQDH
QSIEHSLSPQADIIQSNIIHSDEEFWGSNAVLIQNLAVGGKSLVEATEPSGFNVHSGQSS
LVSTALPVKSGEKTDAVMDTMLQNESGNGLLEDVGGKGTGDFVPENLVDGPSFPVLSNST
MSNDIQEDSQEDSELPTSPFKKEYRVTQLSTISEEEEAMHCNEPTLPIGHLHPTTGIEEN
ASDPNSVLSPGSMVLHSLYKSADSDQYLTCVSQQDFPISPSLELTQEVKPKHDLSEEDIS
KFESLPNHIPNVVSQDNTSVKDLPEMGFKQDQVIAENNPFSEALPKQESPLDVLPNNFLL
DLLPETQAFTPKPAPSHSSENMIKSDFDEAVQQSKPSGDIVEKYHFPKETSPVVVTSEII
AELEAQLAPLDTDTSLTDDGKTCPKDGSFDMESLGIVSEDNFHFVQLTDSNAFASDRSSQ
QTSSITQDLVITNSDLKNIFAPQPTEMDPFSTNKGLVAIPQSAETHNDLKPTESLDVNTD
FWTTPAVQHSMTADLFPVNWPSLPQQSAPSPFDHPTLASGHDRSHNFTSSLFDLSPVASS
TPHVAVDTNALPQLFPFTPTTVNSLPRPKPAANLPTMQAVNSTAYNPFLQDKTQTSDHPS
SPHPVKPLTPPDEKRSESRSVLEKLKSTIHSGRTGQDADKKPLVEGGGSYYHLNHSELVN
LLIQRDNELRQEREQYEKRGGAAGEARGGAKENEVSDQRSGGLHRHASRTHHGADPHAAA
GPPQDEMIQQTPPRIPPRILGGRHNPALLQQPYKCRELSGAR
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgtccttggtgaagaatgacgaggagcagcgatgggtgccgacacacgtgcaggtaact
gtgctgcgggcccgagggctgcgctcgaagggtaaacacggcaccagcgacgtgtacacc
atcatccagctgggcaaagagaaatactccacgtgtgtgatggagaagactacggacccg
gaatgggccgaggaatgctcgttcgagctgcagccggggatcctggaggagggagggcga
gacgcgtacccacccggtagtggcgacctgaccctcaccgttatgcaccgagctctcata
ggactggatgtgtttctgggccaggctgtcatacctctggataaagcttttcaggaacgg
aaatgcatgaaaaatgagtggtgccggctgcattctaagactggcaaaaaggagaaggaa
cgtggggagcttcagttgaccgtgcagttcactcggcacaacctgacggccagcatgtac
gacctttccatgaaggacaaacctcgctctgctttcgacaagctcagagaacgcatgaga
gctaagaagcgctctagcgaagaagattcctcttccgccatcgtccctgggggatacgga
gcactggcacgcatgcgggggcggctgccgagcgatgggggtggcgaggaagactacgag
gatgatgaaggcggggaggcccgcaggagtaagatgagaagttttttcctgcgtgggaag
ttgaggaagtcttcagacacgcgctcaagcacgtcactgggctcagagagcagcgagtct
tcatcgaggggcggcagcctcagtccgacggcaggtatcagcgtggtggtctcagatctg
tccaactctccaagtaacagcagcaacctgactgcagacaacagtccagaccacacagtg
gctccctcaccacaggtgtctcctgtcagacacgtgatgtacgacatcagtttaccagtg
cctcattctatgacgtcagagaacgacacccctattctgcttccttcggtgtgcgtgaat
gggaatccggtggaaacgtctcctctcactcaccacccgccatcacttgtactacagcaa
cctcgaccagagtcaaccaaaccagtcactcagtcaggtcaaccacaggcaaacacgctg
ccagctaagccccagaaagcccagccgaaatcccacgagacacagctacccaaatccgag
tcaaagccaagacccgaacccctgctcccagccctcggggtgcttcagaagggctctctc
tccctctccctgcagaacctctctcgccgcggggaagaaaagcaaaacggcggccctgtg
gatggtcgtcgctggtccttcgataaacctggagaggaagaaaaagcagccatcgttgca
gcgttagagcaagctgggagagtcacagacgaggtggagatggaaacagtgatacctgct
ggagagacagagactcagaacaagaaaaggaggggcctgttctcacacgggaaaggtgat
tcagctgggaaaggaccaatcgcgagcaaagaggaagcagaacatgctcaaccacttgta
gaagtcaaacataaaggatggttcagctccaaggactcacacagtaaacccagcccgctg
gtgtctcctcagtcacactcaagtgctggtacaatctctcctattgtacccttgaccttt
aatgacccttcacagagtatggctgacaaaaacgctaatcccttcacctctcccccaccc
ctttttgacgccaatccattcctcccacacacacagcagaatcctttcattcaggagatt
ccttctaccactcctgatgtgccctctctcttcagctcaacccagtcgcagtctggcact
aatgccaccccagatttactaagtaatggaaaccaaaaggaagtttcccaaaagaatatc
tcatttgatcctttattttctcacttcgaggggctgacagaaaaagatggctttgaatat
tttgttaaggacagactgaagtcagaagaggtgaatgaaacaacaaattcggttacacct
cctgctgtccttatgaaaacaagcaatcaagagccctcaggtgctttgggtggattaatg
gttttggatacgaattacctgactgatttaggacaaactgcttcagcaagtactgtagag
acatctaaagacactactgctgacacacctctagtttcaggaagtgatgataattttatg
agctctagttctaacaagcctgacctcgctgctcatggtgcgcatggcttcccagaattt
gatctcaattcatccgaaatctccttacccgaaaattccagtttagagttttctgaactg
aatacacttgcacgcccttatcctgcactgtcaccccactccaagaaagaagaaagttct
gatgacacaactcttgaggaacacctagagaacaagcaaaataccaaatcagatgtccca
cagccatcagtatcagaagcagacactggtgactttcctcctagtatctccttagagctc
tcagaggggtctgtgagttctgaaacattacagaggcctgaaatgttagactttactaaa
gatattgagtctgtgacagtccatgaggatccactgccgttctttgcggacgacagctca
ggtgacgccctggaacagtccacagtgatatctgattccttaggtggagaccaagaccat
cagtctattgagcatagtctttctccacaggctgacatcattcaaagtaatataatacac
tctgatgaagaattttggggatcaaatgccgtacttattcaaaatttggcagtaggtgga
aagtccctagttgaagccacagagccttcaggattcaacgttcattcaggacagagttcc
ctagtatcaactgctctgccagtgaagagtggagagaagacagatgcagttatggacacc
atgcttcagaatgaatcaggaaatggtctcttagaggatgtcggtggtaaaggtactgga
gattttgttcctgaaaacctagttgatggcccttcctttcctgtactctcaaactccacc
atgtctaatgacattcaggaggacagtcaggaagacagtgaattgccaaccagtccattt
aagaaagaataccgggtaactcaactcagcaccatcagtgaagaggaagaagcaatgcat
tgtaatgaaccgacacttcctataggacatctccatcccaccactggaatagaggagaat
gcatcagatccaaactcagtgctttcacctggtagcatggttctccacagcttgtacaag
agtgcagattcagaccagtatcttacatgtgtatctcaacaggatttcccaatttcccct
agcttagagctcacacaggaagtgaaaccaaaacatgatctgtctgaggaagacatttca
aaatttgaatctttgccaaaccatatccctaatgttgtgtcacaagataacacatctgta
aaagacttaccagaaatgggttttaagcaagatcaggttatagcagaaaacaatcctttt
tccgaagccttgccaaaacaagaatctcctctggatgttctaccaaataattttttactt
gacctcttgccagaaacgcaagcctttacaccaaaaccagccccctcacattcatcagag
aacatgataaagtccgattttgatgaagcggtgcaacagtccaagccttcaggtgacatt
gttgagaaataccactttcccaaagagacgtcaccagttgttgttacctcagaaattatc
gcagaacttgaagctcagcttgcaccattggatacagacacaagtctaacagatgatggt
aaaacctgcccaaaagatggatcgtttgatatggaatctcttgggattgtgtcagaggac
aatttccattttgtccagttgactgattctaatgcatttgcgtctgatcgttcatcacaa
caaacctccagtatcactcaggaccttgtcataactaattctgacctgaaaaacatcttt
gcaccccagccaactgaaatggacccttttagtactaacaaaggtctagttgcaatccct
caatctgcagaaactcacaatgacctgaaaccaacagagagtctagatgtaaatacagat
ttttggacaactccagctgttcaacattctatgacagctgacttatttccagtgaactgg
ccctctttaccccagcaatcagccccttcacccttcgaccacccaacactggcttcaggg
catgatcgtagccataacttcacatcttctttgtttgacctttcacctgtggcttcctca
acaccacatgtagcagtagacactaatgcactgccccagctattcccatttacccctacc
acagtgaactcattgccacgtccaaaacctgctgctaatcttcctactatgcaggctgtg
aattctacagcatacaatccttttctccaggataaaacacagacatctgatcacccgagc
agtccacacccagtgaagcctttgacgcctcctgatgagaaaaggtcagagagtcgctca
gtattagagaagcttaaatccaccatccactcaggacgaacaggccaggatgctgacaag
aagccgctggtggagggaggaggctcatactaccacctgaaccacagcgagctggtgaat
ttgctgatccagcgggataacgagctcaggcaggagcgggagcagtacgagaagcgcggg
ggcgctgctggagaagcgcgaggcggagctaaagaaaatgaggtttctgatcagagatct
ggaggattacatcgacacgcttctcgtacgcatcatggagcagacccccacgctgctgca
ggtccgccccaagatgaaatgatacaacaaacgcctccacgtatccctccacgaatcctg
ggtggacgtcacaaccctgcactgctacagcaaccatataaatgtagagagctatctggc
gctaggtga
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integrated database retrieval system
