Labeo rohita (rohu): 127175251
Help
Entry
127175251 CDS
T09007
Symbol
lrit2
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127175251 (lrit2)
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
127175251 (lrit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
LRR_4
I-set
ig
LRR_1
Ig_2
LRR_5
V-set
fn3
LRR_EndoS
Ig_DSCAM-DSCAML_C
C2-set_2
Motif
Other DBs
NCBI-GeneID:
127175251
NCBI-ProteinID:
XP_050982162
LinkDB
All DBs
Position
13:20760664..20765013
Genome browser
AA seq
561 aa
AA seq
DB search
MDASVTFRLIVFFYLLTHISAECFPGCSCGTDRYGRSLTCMETPLSGIPDDIPADLTKIR
IEKSQLSELPKAAFSSAKFLKHLWLNFNDIAIINIKSLEGLGNLTELRLQGNKLRSVPWT
AFEETPNLKILDLKHNRIDALPEHALKFLPGLTYLDLSSNQLSVISKDVFLNWPLYHGEN
RHEQPAASNVVLALNDNPWLCDCRLGGFIEFIKSLSPPFILMNSYLTCSAPEFKAGKFFH
EVDLKTCVKPVVTAPDTNITVPLGGNITLTCFATARPEPAVRWIYGLKMLRGFREIQSRV
DEDTIRSQLIIPSLHPADRGLYTCTANNFISNSSIGILLDVKSPEGSVSHSSGFPAAIAE
ENVYIDIRIAKQTVYGITIEWHAVTDNPAETWFTIHFGRYDTLKKEQIYIGPGISTYSVT
DLLPATKYEICVTLKNQAPRNGQCIVFVTGSDFNEMEQREKLIHIVVIVLAMVLAVPAGM
YACTTDAKFNCFERCAEMWRNRRHSEQSHTSDERQGTFDSLQAASDEGLCKESSKERKAR
RRSAEKLHKTKNERRPTAELY
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggatgcctcggttacatttcgtttgattgttttcttttatttattaactcatatcagc
gcagagtgttttccaggatgctcctgtgggactgaccgttatgggaggtcactcacgtgt
atggaaacgccattatccggcattcctgacgacataccggcagatttgactaaaatacga
atagagaaatcacagctaagtgaactaccaaaggcagcgttttccagtgcaaagtttcta
aagcatctctggctgaacttcaatgacatcgccatcataaatatcaaaagtctggaaggt
ttgggtaacttgacggagctccggttgcagggtaacaaactgcgttcagtaccatggaca
gcgtttgaggaaacacccaacctaaagattttagacctgaagcacaaccgcattgacgcc
ctccctgaacacgctttaaagtttcttccaggcctgacctacttggatctgtcctctaat
caactctcggtcatctctaaagacgtcttccttaactggcctctctaccacggagaaaac
aggcatgaacaacctgcagcgtccaacgttgttttggcacttaatgacaacccgtggctg
tgcgactgtcgcctgggaggcttcattgagtttatcaagtcgctgagtccaccgttcatt
ctaatgaactcatatttgacatgctctgcccccgaattcaaggcagggaagtttttccac
gaggtcgatctaaagacgtgtgtcaagccagtggtcaccgccccagacaccaacatcacc
gtgccgttaggcgggaacatcacgctaacatgctttgccacggccagacctgaacctgct
gttcggtggatatatggtcttaagatgctaagaggatttcgtgagattcagagccgtgtg
gatgaagacacaatcaggtctcagctgatcattccttcgctccatccagccgatcgaggg
ctctacacctgcactgccaacaatttcatcagcaattcctccatcggcattttactggac
gtgaagtctccggaaggctcagtgtctcattcctcaggcttccctgctgccattgcagag
gaaaatgtttacatcgatatccgcattgccaagcagacagtctacggcatcacaatcgag
tggcatgctgtgacagacaatccagctgaaacctggttcaccatccattttggccgctac
gacacacttaagaaggagcagatatacattgggccgggtatcagcacatactctgtcaca
gacctgctaccagccactaaatatgaaatctgtgttactttaaaaaaccaggctcctcgg
aatggccagtgcattgtatttgtgacaggcagtgatttcaatgagatggaacagagagag
aagctcattcatattgtcgtcattgtacttgccatggtgctcgctgtgcccgcgggaatg
tatgcctgcaccaccgatgccaagttcaactgctttgagcgatgtgcggagatgtggaga
aacaggagacattccgaacagtctcacacgtctgacgagaggcagggcacgtttgacagt
ctccaagctgccagtgatgagggcctctgcaaggagtccagcaaagagcggaaggccaga
cgaaggtctgctgagaagttacacaaaacaaagaatgaacgaagaccaacagccgagctg
tactga
DBGET
integrated database retrieval system
