Labeo rohita (rohu): 127175260
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Entry
127175260 CDS
T09007
Symbol
fbxo11a
Name
(RefSeq) F-box only protein 11a
KO
K10297
F-box protein 11
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127175260 (fbxo11a)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127175260 (fbxo11a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
F-box
zf-UBR
Motif
Other DBs
NCBI-GeneID:
127175260
NCBI-ProteinID:
XP_050982174
LinkDB
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Position
13:complement(33201486..33242142)
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AA seq
879 aa
AA seq
DB search
MNSVRATNRRPRRVSRPRPVPPDRNNAERDEEVPAEMVAEESGQGAQNSPYQLRRKSLLP
KRTACPTKTNMEGASTSTTENFGHRAKRARVSGKSQDLPVTPAEQYLQVKLPDEVVLKIF
SYLLEQDLCRAACVCKRFSELANDPILWKRLYMEVFEYTRPMMHPESGKFYQINPEEYEQ
PNPWKESFQQLYKGAHVKPGFAEHFYSNPARYKGRENMLYYDTIEDALGGVQEAHFDGLI
FVHSGIYTDEWIYIESPITMIGAAPGKVADKVIIENTRDSTFVFMEGSEDAYVGYMTIKF
NPDDKSAQHHNAHHCLEITVNCSPIIDHCIIRSTCTVGSAVCVSGQGASPTIKHCNISDC
ENVGLYITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVGVFTFDHGMGY
FESCSIHRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIENKIYANNFAGV
WITSNSDPTIRGNAIFNGNQGGVYIFGDGRGLIEGNDIYGNALAGIQIRTNSCPIVRHNK
IHDGQHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIHSGKQVGVYFYDN
GHGVLEDNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGFIEDNEIFDNA
MAGVWIKTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGVLISTNSHPVL
RKNRIFDGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKDNKIMNNQDAIEK
AVSRGQCLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFC
DCGAGTLSNPCTLAGEPTHDTDTLYDSAPPIESNTLQHN
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtcagagcgactaaccgcagaccccggcgagtgtcgaggccgcgcccggta
ccgcctgacagaaacaacgcagaaagagatgaggaagtgcctgccgagatggttgcagaa
gaatctggtcaaggcgctcaaaatagtccgtaccaacttcgaagaaaatctctgttaccg
aagagaacagcttgtccaacaaagaccaacatggagggtgcttccacgtcaacgacagaa
aactttgggcatcgggcaaaacgtgctagagtgtcgggaaaatcacaagatctgcctgtc
accccggcggagcagtatctacaggtgaagcttccggacgaggtggttctgaaaatcttc
tcctatctgttggagcaggacctgtgtcgagccgcctgtgtgtgcaaacgctttagtgaa
ctggccaatgaccccatcctctggaaaagactgtacatggaggttttcgagtacacgcgt
cccatgatgcaccccgagtctgggaagttctaccagatcaacccagaagaatatgaacag
cccaatccctggaaagagagctttcagcaactgtataaaggcgctcacgtcaaacccggc
ttcgcagaacatttctacagcaacccggccagatataagggacgagaaaacatgctgtat
tacgacaccattgaagacgctctgggaggagttcaggaagcgcactttgacggtttgata
tttgtccattctgggatctacacagacgaatggatctacattgagtcgcccatcacaatg
attggcgctgctccagggaaagtagcggataaagtcatcatcgagaacactagagattcg
acgtttgtgttcatggaggggtcagaagacgcgtatgtaggatatatgacaattaagttc
aatcctgatgacaaatcagctcaacatcacaacgctcatcactgcctggagatcaccgtc
aactgcagccccatcattgaccactgcatcatccgcagtacctgcacagtgggctctgca
gtgtgtgtgagcggccagggagcgtcacccaccatcaaacactgtaacatcagtgactgt
gagaacgtggggctctatatcacggaccacgcgcagggcatttatgaagacaacgagatc
tccaataatgctctagcagggatctgggtgaaaaaccacggcaaccccatcatcagacgg
aaccacatccatcacggcagagacgtcggagtgttcacgtttgaccacggcatgggctac
tttgagagctgcagcatccataggaaccggatagcaggttttgaggtgaaggcgtatgct
aaccctacggtagtgcgctgcgagatccatcacggacagacgggcggcatctacgtgcac
gagaagggccgaggccagttcatcgagaacaagatctatgcaaacaactttgcgggcgtg
tggattacctcaaacagcgaccccacgatcaggggtaacgccatattcaatggcaaccag
ggtggtgtttacatattcggcgatggccgaggcctcattgaagggaacgacatctacggc
aacgccttagctggaatccagatccggaccaacagctgcccgatcgtccggcacaacaag
atccacgacggacagcacggaggcatttatgtgcatgagaagggtcagggagtgatcgag
gagaacgaggtgtacagtaatacgttggccggtgtgtgggtgaccacgggcagcacacct
gtactgcgcagaaacaggatacacagcgggaaacaggtgggcgtttatttctatgataat
ggtcacggagtgctagaagacaacgacatctataaccacatgtactctggagttcagatc
agaactggcagcaatcccaaaattaggaggaataagatctggggtggacagaacggagga
atccttgtttacaattcaggtttaggctttattgaagacaacgagatctttgacaacgcc
atggccggggtttggatcaagaccgacagcaaccccacgctccgcagaaacaagatccac
gacggccgggacggaggaatctgtatattcaacggaggacgagggttgctggaagagaac
gatatcttcaggaacgctcaggctggagtcctcatcagtactaacagtcaccctgttctg
cgcaagaacaggatatttgacggttttgctgctggcattgagatcacgaatcatgcgacg
gcgacattagaaggcaatcagattttcaacaaccgcttcggtggtttgtttctcgcgtct
ggcgtcaacgtcacgatgaaagacaacaaaatcatgaacaatcaggatgccatagagaaa
gcggtgagcagaggtcagtgcctgtacaagatttccagttacaccagctatccaatgcac
gatttttacaggtgtcacacctgtaacaccacagaccgcaacgccatctgtgtgaactgc
atcaagaagtgtcatcaagggcacgacgtagaatttattagacatgataggtttttctgt
gactgcggcgcggggactttgtcgaacccttgcacactagccggagagccgacgcacgac
acagacacgctgtacgattcggcgcctcctatagagtccaacacgctgcagcacaactga
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