Labeo rohita (rohu): 127175296
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Entry
127175296 CDS
T09007
Symbol
rin2a
Name
(RefSeq) ras and Rab interactor 2 isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127175296 (rin2a)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
127175296 (rin2a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
RA_2
RA_3
Lpg0393_VPS9
FERM_f0
TUG-UBL1
Motif
Other DBs
NCBI-GeneID:
127175296
NCBI-ProteinID:
XP_050982237
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All DBs
Position
13:19344869..19387090
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AA seq
960 aa
AA seq
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MRDLFVSDTQTKKWRVREWRPSLTQKSCVHPTMSTEMMMQSCLMDRSSSFFKLIDTFSTE
ISELKQEMVLPAKEPETEILQGLEGEVSGLFLQSSACAGAPGVRDSGYDSLRRRMSILDR
LMQTHSVWLLLSLSDEEARRILQPLPAGSFVVRRCYKLQKKVISLRMDNDELIVRDFPVK
ESQYTFSLEGSGISFADLFRLVAFCCISRDVLPFTLKLPEAIAAAKTPKDLEEVAQLGRG
FWDSELCNKRKSVPGETEVSQQRLKQWLSPRLPAIPFTRTPSELECSQSNGALCFINPLF
LQTHQTNPSATKQESSPGNTDRQNREDSVVCRAKSTQNKSHASVSRSKSERSPPPRPPPP
RFGSAVLRKKKTMPEKVCWIKTPQEKSSLLGRLGSSFSSLSPSSSPPKKFSKPILVPSSR
NKNSSNLLDADGLRCHMALDDQTIEEAVSWSLAKLSSRNSTALENGSPADEHCTTGRERL
SDISISTSSSDSLDFTHSFPLPIEASPSRTDRPTGDSSLEEEEEEEDDGINLESDQEVPP
PFKSKKQNGTATFVLPRALRGQLRKMSGVLNSLMTPEKRAIRKIVEQSRDKGTYFGCLVQ
DYVSFLQENRGCHTSGLDLLQTLRQFMTQMKSYLLQSSELDPPIESLIPEDQIDQVMEKA
MHKCVLKPLKPVIEAALRDFQVSSGTWQQLKENLILAKAKQPQEMGVDGALPPDPVAIEK
IRHKFHNMCKMYSPEKKVSLLLSVCKLIYNIMESNSGRMYGADDFLPMLTYVMAQCDMPQ
LDAEIEYMMELLDPSLLHGEGGYYLTSAYGAMSLIKNFQEDQAARVLSSETRNTLHQWHR
RRTTQRTTPSVDDFQNYLRVALQDATSGCTAKTLKVHPYATTEEVCQICADKFKISDPEN
YALFLLTDETTQQLAPDTHPQRIKAELHSRPQPQLFYFVYRQIQTLTVPSDQLNDNTSPN
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgagagacctttttgtgtctgacacacaaactaagaaatggagagtcagagaatggaga
ccgagcctgacacagaagagctgcgtacacccaaccatgtctacagagatgatgatgcag
tcctgcctcatggaccgaagcagcagcttttttaagctgattgacacattctccacggag
atctcggagctaaagcaggagatggttctgcccgctaaagaaccagaaacagagatctta
cagggtctggaaggagaggtcagtggtcttttccttcagtcttctgcctgtgctggtgca
cctggagtgagggattctggctatgactctctacgcagacgcatgagcatcctggacaga
ctgatgcagacacactctgtatggttgctactgtcactcagcgatgaggaagccagacgt
attctgcagccgctgccggcagggagttttgtggtgaggaggtgttataaactgcagaaa
aaggtgatttcccttcgtatggacaatgacgaattgattgttcgggacttcccagttaaa
gagagccaatatactttttctctggagggctcagggatcagctttgcagacctctttcga
ctggtggcgttctgctgtatcagcagggacgttctgcccttcacactgaagctgcccgag
gccatcgcagctgcaaagacccctaaagatctggaggaggtggctcagttaggaagaggt
ttctgggactctgaactgtgcaataaaaggaagtctgtgcctggggagactgaagtttca
caacagagactaaaacagtggttgtccccaagacttccggccatccctttcactcggacc
ccttctgaacttgaatgcagtcaatccaacggagcgctgtgcttcatcaatcccctcttc
ctgcagacacaccaaactaacccttcagctacaaagcaagaatcatccccgggcaacaca
gatcggcagaacagggaggacagtgtcgtttgccgtgcaaaaagcacgcaaaacaaatca
cacgcaagtgtgagtagatccaagagcgagcgatccccgccacctcggcccccacctccc
cgctttggatcagcagttcttcgtaaaaagaaaaccatgcctgagaaagtctgttggatc
aaaacgcctcaggaaaagagcagcctgctggggaggttgggatcatcctttagctcctta
tcaccctcatcctccccacccaaaaaattcagtaaacccatcctggtgccctcatcccgc
aataagaattcctccaatctgcttgatgccgacggtctccgctgccacatggccctggat
gaccagaccattgaggaagccgtgtcttggagcctggccaagctgtcctcgcgcaattcc
actgccttggagaacggcagccccgcggatgagcactgcaccaccggacgagagcgtctg
agcgacatcagcatctccacctcatcctcagactctctcgacttcacccacagctttccc
ctgcccatagaggccagtccctccagaactgaccgtcccactggtgacagcagcctggag
gaggaagaagaggaagaagacgatggcattaatttggagagcgaccaggaggtgccacca
ccgttcaagtcgaagaagcagaatggcactgctacgttcgtgctgccgcgtgcactgaga
ggacaattgcggaagatgagcggcgttcttaattctctgatgacgcccgagaagagagcc
attcggaagattgtcgagcaatccagggataaagggacttactttggctgcctggtgcag
gactatgtgagcttcttacaggagaaccgcggctgccacacatcaggcttggacctgctg
cagactctcaggcagttcatgactcagatgaagtcctacctgctgcagagctcagagctt
gacccaccaattgagtcccttatcccggaggatcaaattgatcaggtgatggagaaagcc
atgcacaagtgtgtactgaagcccctaaagcctgtgattgaggccgctctgcgggacttc
caggtcagcagtgggacttggcagcagctgaaggagaatctaattttggccaaagccaag
cagccccaggagatgggtgtggatggagctctgccccctgaccctgtggccatagagaag
attcgccacaagtttcacaacatgtgcaagatgtactcaccagagaaaaaagtgtctctg
cttctcagtgtgtgcaagctcatctacaacataatggagagcaactcagggaggatgtat
ggggcagatgacttcctgcccatgctgacgtatgtgatggcccagtgcgacatgccacaa
ctggatgctgaaatagaatacatgatggagttactggacccatccctgcttcatggagaa
ggaggctattacctgaccagtgcatatggggcaatgtctctcatcaagaacttccaggag
gaccaagcagctcgtgtgctgagctctgagacccgtaacacactgcaccagtggcaccgt
agacgcacaacccagcgtaccacaccatctgtggatgatttccagaactacttgcgggtg
gcactgcaagatgcaaccagtggctgcacagctaaaaccctcaaggtgcacccttacgcc
acaacggaggaagtgtgtcagatatgtgcggacaagtttaaaatttcagacccagaaaac
tacgcccttttcctcttgacggatgaaaccacacagcagttggccccagacactcacccg
cagaggatcaaggctgaactgcatagccgcccacaaccacaactcttctactttgtgtac
cgccagatccaaactctcactgtgccttcagaccagctcaacgacaacacttcacccaac
tga
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