Labeo rohita (rohu): 127175321
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Entry
127175321 CDS
T09007
Symbol
capn2a
Name
(RefSeq) calpain 2, (m/II) large subunit a
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04141
Protein processing in endoplasmic reticulum
lroh04210
Apoptosis
lroh04217
Necroptosis
lroh04218
Cellular senescence
lroh04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127175321 (capn2a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127175321 (capn2a)
04217 Necroptosis
127175321 (capn2a)
04218 Cellular senescence
127175321 (capn2a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
127175321 (capn2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127175321 (capn2a)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
127175321 (capn2a)
Peptidases and inhibitors [BR:
lroh01002
]
Cysteine peptidases
Family C2: calpain family
127175321 (capn2a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
127175321
NCBI-ProteinID:
XP_050982288
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All DBs
Position
13:complement(29509017..29524357)
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AA seq
698 aa
AA seq
DB search
MSGVASTLAKKRALAAGFGTNTNAVKYLNQNFESLRSECLSRGQLFCDPTFPAAPESLGF
NELGPRSSKTRGIVWKRPGEVTSNPEFIVGGASRTDICQGGLGDCWLLAAIASLTLNEDV
LARVVPSNQGFGQDYAGIFHFQLWQYGEWVDVVVDDRLPTRDGELLFVHSATCSEFWSAL
LEKAYAKVNGCYEALSGGSTTEGFEDFTGGIAESFELKRAPSNIFQIIKQALESGALLGC
SIDITSAADSEAITSQKLVKGHAYSLTKAIEVNYRGRKEKLVRVRNPWGQVEWTGAWSDN
SSEWNAVDPSERENVKAEDGEFWMSFSDFVRHYSRIEICTLTPDTLTSDSVKHWSTSKFD
GTWRRGSTAGGCRNHPYTFWMNPQFKIKLEEEDDDPDDNEVGCSVVIGLIQKNRRQLRKS
GEDMHTIGYAIYEVPPQFRGQKDVHLDKNYFLTHAQKARSETFINLREVSTRFKLPPGEY
LIVPSTFEPHKNGDFCVRVFSEKQSEMQQCDDPVEANIDDETVSEEEVDAGFRGLFTKLA
GDDMEISATELRTIFNKIVAKRTDIKTDGFSMETCRVMVNLMDESGNGKLGLAEFATLWK
KIQKYLAIYKKNDMDGSGCMSTPEMRMALKEAGFSLNDCIHQNLAARYGDTDMKIDFDNF
VSCVMRLEMMFKVFKRIDVDSSGFIELDFFQWLTFAMI
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcgtggcatccacactcgccaagaagagagccctggccgctggctttgggacg
aacaccaatgcggtgaagtacctgaaccagaattttgagagtctgagaagtgagtgtctg
agccgagggcagctgttctgcgatccaacgtttccagccgctcccgaatctctgggcttc
aacgaactcggtccacgatcgtcaaaaacaagaggcattgtgtggaaaagacccggggaa
gtgacctccaatcctgaatttattgttggaggggcttcaagaacagatatttgccaagga
ggtttaggtgattgctggctcttagctgccattgcttccctaacccttaatgaagacgtt
ttggctcgtgtcgttccatccaaccagggcttcgggcaagactatgctggaattttccac
tttcagttgtggcagtatggagaatgggtggatgtggtggtggatgatcgattgcccact
cgtgatggagagttgctgtttgttcattccgccacatgctcagagttttggagcgccctg
ctggagaaggcctatgctaaagtgaatggttgctatgaagctctgtctggaggttccacc
acagagggtttcgaggatttcactggtgggattgcagaatcgttcgagttgaaacgcgcc
ccgtccaacatttttcaaatcatcaagcaggccctggaatctggagctcttttgggatgc
tccatagatatcaccagtgcagcagactcagaggccatcacttctcaaaagcttgtgaaa
ggacatgcctactctcttactaaagcaattgaggttaattaccgaggcagaaaggagaag
ctggtcagagttcgtaatccttggggtcaggtggaatggacaggagcctggagtgacaac
tcttctgaatggaatgctgtggatccgtctgagcgtgagaatgtgaaggcagaagatgga
gagttctggatgtcattctcagattttgtgaggcattattcccgcatagagatctgcact
ctgaccccagatacgctgacatcagactctgtcaaacactggagtacgagtaaattcgat
ggcacctggagaagaggctctacagctggcggctgcaggaaccatccatacaccttctgg
atgaatcctcagtttaagatcaagctggaggaggaagatgatgatcctgatgataatgaa
gtgggctgcagtgtggtgattggcttgatacagaagaaccggcgtcagctgaggaagtct
ggagaggacatgcacaccattggctatgccatctatgaggtgcctccccagttccgcggg
caaaaggacgttcatctggataagaactatttcctgacccacgctcagaaagctcgatcc
gagacctttatcaaccttagagaagtcagcacccggttcaaacttcctcctggagaatat
ctcatcgtcccttccacattcgaaccgcacaagaacggagacttctgtgtgcgtgtgttc
tccgagaaacagtctgagatgcaacaatgtgatgaccctgtagaggcaaacatagatgat
gagacagtgtctgaagaagaggttgatgctggctttaggggactgtttactaaacttgca
ggggatgacatggaaatctctgccactgagctgcgaacaattttcaacaaaatagtcgca
aaaagaacagatattaagacagatggtttcagtatggaaacgtgtagggtcatggtgaac
ctcatggatgaaagtggcaatggtaaactggggttagctgagtttgccactctttggaag
aaaattcaaaagtatctggccatttataagaagaatgacatggatgggtccggctgcatg
agtacaccagagatgcggatggctttaaaggaagcaggattctctctgaatgactgcatt
catcagaatctggctgcacgctatggagacacagacatgaagatcgactttgataacttt
gtgtcctgtgtgatgcgcctggagatgatgttcaaagtgttcaaaaggattgatgtagac
agcagtgggttcattgagttggacttcttccagtggctgacgtttgctatgatttaa
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