Labeo rohita (rohu): 127175333
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Entry
127175333 CDS
T09007
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a
KO
K19472
homeobox protein SIX2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127175333 (six2a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
127175333 (six2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
127175333
NCBI-ProteinID:
XP_050982302
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All DBs
Position
13:complement(13959269..13962566)
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AA seq
288 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNTNSHNPLTSSMNGNKTILGSSDDDKTPSGTPDHTSSSPALLLTSNS
GLQSLHGLAPPPGPSAIPVPSADSVHHHHSLHDTILNPMSSNLVDLGS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgcttccaacattcggctttacgcaagagcaagtggcgtgcgtctgcgaggtc
ctccagcagggaggaaacattgaacgtctcgggcgcttcttgtggtctctgccggcttgt
gaacatctccacaagaacgagagtgtgctcaaagcaaaagctgtggtcgcttttcatcgg
ggaaatttcagagagctttataagattctggagagccaccagttctctccgcacaaccat
ccgaagttgcagcagctgtggctcaaagcgcattatatcgaggctgagaagctccggggc
cgccctcttggggctgttgggaagtaccgcgtccgaagaaagtttccgctaccccgctcc
atttgggacggcgaggagacaagttactgctttaaagaaaagagcagaagcgtgctgcgg
gaatggtacacccataacccatacccttccccgcgggagaagagggaactagcagaggca
acggggctaacaacaacacaagtcagtaactggtttaaaaacagacgtcaacgcgaccga
gcggcggaagctaaggaaagggagaataatgagaactcgaacacaaacagtcacaaccca
ttaacgtcttccatgaatggaaataagactattttaggaagctcggacgacgacaaaacg
ccgtctggtaccccagatcacacctcgtcaagcccggccttgctgctcacgtcaaactcc
gggcttcagtcccttcacggcctcgcacctccacccggtcccagcgccatcccagtgcct
agtgcagattccgtgcatcaccaccattcattacacgacactatactgaaccctatgtca
tcaaacttggtcgaccttggctcttaa
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