Labeo rohita (rohu): 127175367
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Entry
127175367 CDS
T09007
Symbol
valopa
Name
(RefSeq) vertebrate ancient long opsin a
KO
K04256
c-opsin
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lroh01009
]
127175367 (valopa)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lroh04030
]
127175367 (valopa)
Protein phosphatases and associated proteins [BR:
lroh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127175367 (valopa)
G protein-coupled receptors [BR:
lroh04030
]
Rhodopsin family
Vision
Opsin
127175367 (valopa)
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
7TM_GPCR_Srsx
7tm_4
Motif
Other DBs
NCBI-GeneID:
127175367
NCBI-ProteinID:
XP_050982358
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Position
13:complement(35742172..35763345)
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AA seq
382 aa
AA seq
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MESFEVAVNGVSHTEDPFSGPLTSIAPWNYKVLAALMFIVTAVSLCENFVVMLVTFRFKQ
LRQPLNYIIVNLSLADFLVSLTGGMISFVTNYHGYFFLGRWACVLEGFAVTFFGIVALWS
LAVLAFERFFVICRPLGNIRLRGKHAALGLLFVWTFSFIWTIPPVLGWSSYTVSKIGTTC
EPNWYSGNFHDHTFIITFFITCFIFPLGVIIVCYCKLLRKLRKVSNTQGRLGNARKPERQ
VTRMVVVMIVAFMVAWTPYAAFSIVVTACPSMYLDPRLAAAPAFFSKTAAVYNPIIYVFM
NKQFRKCVVQLLSCSDVTVIEGNINQTTERAGMTNESNTGEMSAIAARIPAAGTVPPKTV
EHPNERSSFAQIPIPENKVCPM
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtttgaggtggcggtgaacggcgtgtctcacaccgaggatccgttctcggga
ccgctcacatccatcgcgccctggaactataaagtgctggcggcgctgatgttcatagtg
accgcggtgtctctctgcgagaacttcgtagtgatgctggtcaccttcaggttcaaacag
ctccggcagccgctcaattacatcatcgtcaatctgtctctggcggactttctcgtgtcg
ctgaccggaggaatgataagttttgtgaccaactaccacgggtatttcttcttggggaga
tgggcttgtgttttggagggatttgcagtcaccttttttggtatcgtggctctgtggtct
ctggccgtcctggcgttcgagcgttttttcgtcatctgtcggccgctggggaacatccgt
ctgcggggcaaacacgcggctctgggtctgctgtttgtctggaccttctccttcatctgg
accattcctcctgtcctgggctggagcagctacaccgtcagcaagatcggcaccacctgc
gaacccaactggtattcaggaaacttccacgatcacaccttcatcatcacgttcttcatc
acctgtttcatctttccgctgggtgtgatcatcgtctgctactgcaaactgcttcggaaa
ctcagaaaggtgtccaacacgcaaggcaggctgggtaatgccaggaagccggagcgtcag
gtgacccgtatggtggttgtgatgatcgtggccttcatggtggcctggactccgtacgcc
gccttctccatcgtcgttacggcctgtcccagcatgtacctggacccacggctggcagcc
gctccagcgttcttctccaaaaccgcagcggtttacaatcccatcatctatgtgttcatg
aacaaacagttcaggaagtgtgtggttcagctcttgagctgcagtgacgtcaccgtcatc
gaggggaacatcaaccagaccaccgagcgcgcaggcatgaccaatgaaagcaacacagga
gagatgtccgccatcgccgcacgcatccccgcggctggaaccgtcccacctaaaacagta
gagcatcccaatgaacgcagctcattcgcccaaattcccattcctgagaacaaagtatgt
ccgatgtaa
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