Labeo rohita (rohu): 127175383
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Entry
127175383 CDS
T09007
Symbol
papolg
Name
(RefSeq) poly(A) polymerase gamma isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127175383 (papolg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127175383 (papolg)
Enzymes [BR:
lroh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
127175383 (papolg)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
127175383 (papolg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
DUF4269
Motif
Other DBs
NCBI-GeneID:
127175383
NCBI-ProteinID:
XP_050982375
LinkDB
All DBs
Position
13:complement(18350705..18361618)
Genome browser
AA seq
747 aa
AA seq
DB search
MKEMSTTGNSTLGGQQPRKHYGITSSISLAFPREIDHIYTQKLTEAMKPFGVFEGEDELN
HRLAVLGKLNSFVKEWIAEISESKNLPPSAIANVGGKIFTFGSYRLGVHTKGADIDALCV
APRHVERTDFFSSFFEKLKRHDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIP
DNLDLRGDSLLRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSN
MLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPV
WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKNGLTVTDEILQGKADWS
KLFEPPNFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEFITLAHVNPQ
SFPGSKENRNENEFVSMWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKD
GMTIEATHVKKKQLHHYLPPELVQRKKKSLGDINRNSNGGGSKRCSLDGSQLDSSRDTDI
GTPFSSPTPVSKPCQPVSTPEDSSIGQPKHPVLVFMDSPPASEVSPPKPEQGMSIPVIGS
KPIATPVAKLPALPAGNTIPTVVGRSVIPRVTSSSPSPTELPSSVNGAPKRPHSPSLEDQ
PKRHKDTEVFSDDSAFKEPYPPISNGLDCEERPAVEDLSATKPMPIPTIDTSRSQRLPSK
ELPDASSPIPTSNLRVIKNSIRLTLNR
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagatgtcaacgactggtaacagtacgcttggcgggcagcagcctcggaaacat
tatggcatcacatcttcaatcagcctggcctttcccagagagatagaccatatctacact
cagaagcttactgaggctatgaaaccatttggagtgtttgagggtgaagatgagctcaat
cacaggcttgcagtacttgggaagctgaattcatttgtgaaggagtggattgcagaaatc
agtgaatcaaagaatcttccaccgtcagcaatagcgaatgttggtggcaaaatctttact
tttgggtcctataggttgggagtgcacacaaaaggtgctgatatagatgctttgtgtgtt
gccccgcgtcacgttgaaaggacagactttttttcgtccttctttgaaaaactaaaacgg
catgatgagattaaggacctgcgagctgttgaggatgcatttgtacctgtcatcaaattc
aagtttgatggaattgagattgatctgctgttcgccagacttgctctacagtcaattcct
gataacctggacctgagaggagactctctcctcagaaacttggacatcagatgcattcgc
agtcttaacggttgccgtgttacagatgagatcctatatttggtgcctaacaaagagaac
ttcagattaacattgagagcgattaaattgtgggccaaacgccgtggaatttattccaac
atgctaggctttcttggtggagtttcctgggctatgctcgtggccagaacgtgtcagctc
tatccaaatgctgttgccgccacacttgtgcacaagttctttctggtcttctctaagtgg
gaatggccaaatcctgtgcttttaaaacaacccgaagacagcaatttgaatctgccagtc
tgggatccacgggtgaatccatcagacaggtatcatctgatgccaatcatcactcctgca
tatccacaacagaactccacctacaacgtgtccacttccacacgcaccatcatgagtgaa
gagttcaagaatggtctcacggttacagatgaaattcttcagggtaaagcagattggtcc
aagttgtttgaacctcccaactttttccagaagtacaagcattacattgtcctcactgcc
agtgcatctactgaggaaaaccatctggagtggattggactggtggaatcaaagataaga
gtgttggttggaaatttggagcgcaatgaattcatcacccttgcccatgtcaacccacag
tcttttcctgggtcaaaagagaatcgcaatgagaatgaatttgtttccatgtggttcatt
ggaatcagcttcaaaaaactggataattctgactgtgtgaacattgacttgacctacgat
atccagtccttcacagatactgtttatagacaggccagcaatatcaacatgctaaaggat
ggcatgactattgaggccacacatgtcaagaagaagcagttgcatcattacctgcctcct
gaacttgtgcagagaaagaagaagagtttgggagatataaaccggaactcaaatggtggt
gggtcaaagcgctgctctctggatggcagtcagctggacagctccagggacacagacatc
ggcactccatttagctctcctacaccagtcagcaaaccatgccagccggtctccacacct
gaagacagtagtatcggtcaacccaagcatccagtccttgtattcatggacagcccacca
gcatcagaagtttctcctccaaaaccagaacaaggaatgtccattccagtcatcggatcc
aagcccatcgccactccagttgccaagctgccagcacttcctgctggcaacaccattcct
acagtggtgggccgcagtgtgataccacgcgttacctcttcctctcctagcccgactgaa
ctgcccagcagtgtcaatggagcaccaaagagacctcactctccatctctggaggatcaa
cctaagaggcacaaagatacagaggtgttttctgatgactctgcatttaaagagccgtac
cctccaatcagtaatggtttggactgtgaagaaaggccagcagtggaggatttgtcagca
accaaacctatgccaataccaacaattgacacatcaagatcacagagactacccagtaaa
gagcttccagatgcatcctccccaattcccacaagcaacctccgtgtgattaaaaattca
atcaggctcacacttaaccgataa
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