Labeo rohita (rohu): 127175412
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Entry
127175412 CDS
T09007
Symbol
rrh
Name
(RefSeq) visual pigment-like receptor peropsin
KO
K04253
visual pigment-like receptor peropsin
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lroh04030
]
127175412 (rrh)
G protein-coupled receptors [BR:
lroh04030
]
Rhodopsin family
Vision
Opsin
127175412 (rrh)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_2
Motif
Other DBs
NCBI-GeneID:
127175412
NCBI-ProteinID:
XP_050982417
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All DBs
Position
13:complement(12791869..12796268)
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AA seq
341 aa
AA seq
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MIMCDKEMASGVLNASAETVYGEKSAFTQTEHNIVAAYLITAGVVSLSSNIVVLLMFVKF
RDLRTATNAIIINLAFTDIGVAGIGYPMSAASDLHGSWKFGYTGCQIYAALNIFFGMASI
GLLTVVAIDRYLTICRPDIGQKLTTVSYTLLIMAAWLNAVFWSSMPIVGWAGYAPDPTGA
TCTINWRNNDTSFVSYTMTVITVNFIIPLAVMFYCYYNVSVTVKRYKASNCLDSINIDWS
DQMDVTKMSIIMIVMFLTAWSPYSIVCLWASFGDPKTIPAPMAIIAPLFAKSSTFYNPCI
YVIANKKFRRAITGMLRCQTRQRITISNQYPMTASSAQLNP
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgattatgtgtgacaaagagatggcatctggagtcctgaacgcttctgctgagaccgta
tatggtgaaaagagcgccttcacacaaactgaacacaatattgttgctgcatacctcata
accgcaggagtggtcagtctgtctagtaacattgtggtgctgctgatgtttgtgaagttc
agagatttgcgtactgccacgaatgctatcattatcaatctggctttcactgacattggc
gtagccggtattggataccccatgtcagcggcctcagacctgcacgggagctggaaattt
ggttacacaggttgccagatttatgctgccttgaatatattctttggtatggccagtatt
ggactgctcactgtggttgccattgaccgatacctcaccatatgtcgacctgatatagga
cagaagctgacaacagtatcatacacgcttctaattatggctgcttggctgaatgcagtg
ttttggtcatctatgcccatcgttggttgggcaggatatgctcctgaccccacaggagcc
acttgcaccatcaactggaggaacaatgacacatcttttgtgtcctacacaatgacggtg
atcactgtcaacttcattattcctctggcggtcatgttctactgttactacaacgtctca
gttactgtgaagaggtacaaagccagtaactgcctggacagcatcaacatagattggtca
gatcagatggatgttaccaagatgtccattataatgatagtgatgttcctgactgcctgg
tctccatattcgattgtgtgtttgtgggcgtcatttggtgaccccaaaacgattccagct
ccaatggccataatcgccccactctttgccaaatcctccaccttttacaatccttgcatt
tatgtcatcgccaacaagaagttcaggagagccatcactggaatgttacgatgtcaaaca
cgacagagaatcacaattagcaaccagtatccaatgacggcatcatcagcacaactcaac
ccctaa
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