KEGG   Labeo rohita (rohu): 127175458
Entry
127175458         CDS       T09007                                 
Symbol
tbp
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    127175458 (tbp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lroh03000]
    127175458 (tbp)
   03021 Transcription machinery [BR:lroh03021]
    127175458 (tbp)
Transcription factors [BR:lroh03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    127175458 (tbp)
Transcription machinery [BR:lroh03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     127175458 (tbp)
  RNA polymerase III system
    TFIIIB
     127175458 (tbp)
  RNA polymerase I system
    SL1/TIF-1B
     127175458 (tbp)
SSDB
Motif
Pfam: TBP TFIIA
Other DBs
NCBI-GeneID: 127175458
NCBI-ProteinID: XP_050982486
LinkDB
Position
13:complement(17384007..17389973)
AA seq 306 aa
MEQNSSHPPYPQVLASPPGAMTPSLPIFSPMMPYGTGLTPQPVQNTNSLSLLEEQQRQQQ
QQQQQQQQQAASQQQGGMVGGSGQTPQLYHSQVSTTTALPGNTPLYTTPLTPMTPITPAT
PASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALI
FSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGL
VLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILK
GFRKTT
NT seq 921 nt   +upstreamnt  +downstreamnt
atggagcagaacagcagccaccctccttatcctcaagtgctggcatctccgccgggagcc
atgacgcccagcctgcccattttcagtcccatgatgccgtatggcacgggtcttacacca
cagccggtgcagaacaccaacagcttgtccctcctggaggagcagcagcgacaacaacag
caacagcaacagcagcaacaacaacaggcagcctcacaacagcagggagggatggtggga
ggttcaggccagacaccccaactctaccactcacaggtctccaccacaacggcactgcca
ggcaacacgccactttataccacacctctcacccctatgacccccatcactcctgccaca
ccggcctcagagagctctggcatcgtcccccagttacagaatattgtgtccactgtaaac
ttggggtgcaaacttgacttgaagacgatagcacttcgagccagaaatgctgaatataat
ccaaagcgttttgctgccgtcatcatgagaatacgagaacccagaacaacagcgctcatc
ttcagctcggggaagatggtgtgcacaggagcgaaaagtgaggaacagtcccgattagca
gccagaaaatatgccagagtggtgcagaagttgggttttcctgccaaattcttagacttc
aaaattcagaacatggtgggcagctgcgacgtcaagtttcccatccgattagagggcctg
gtgcttacacaccagcagtttagcagctatgaaccagagttatttccaggattaatctac
agaatgatcaaacctagaatcgtccttttaatattcgtttcaggcaaagttgtacttaca
ggtgcaaaggttagaggagaaatctatgaagcatttgagaatatataccccatcctgaaa
ggattcaggaagactacgtaa

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