Labeo rohita (rohu): 127175458
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Entry
127175458 CDS
T09007
Symbol
tbp
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127175458 (tbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127175458 (tbp)
03021 Transcription machinery [BR:
lroh03021
]
127175458 (tbp)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
127175458 (tbp)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127175458 (tbp)
RNA polymerase III system
TFIIIB
127175458 (tbp)
RNA polymerase I system
SL1/TIF-1B
127175458 (tbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
TFIIA
Motif
Other DBs
NCBI-GeneID:
127175458
NCBI-ProteinID:
XP_050982486
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All DBs
Position
13:complement(17384007..17389973)
Genome browser
AA seq
306 aa
AA seq
DB search
MEQNSSHPPYPQVLASPPGAMTPSLPIFSPMMPYGTGLTPQPVQNTNSLSLLEEQQRQQQ
QQQQQQQQQAASQQQGGMVGGSGQTPQLYHSQVSTTTALPGNTPLYTTPLTPMTPITPAT
PASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALI
FSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGL
VLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILK
GFRKTT
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaacagcagccaccctccttatcctcaagtgctggcatctccgccgggagcc
atgacgcccagcctgcccattttcagtcccatgatgccgtatggcacgggtcttacacca
cagccggtgcagaacaccaacagcttgtccctcctggaggagcagcagcgacaacaacag
caacagcaacagcagcaacaacaacaggcagcctcacaacagcagggagggatggtggga
ggttcaggccagacaccccaactctaccactcacaggtctccaccacaacggcactgcca
ggcaacacgccactttataccacacctctcacccctatgacccccatcactcctgccaca
ccggcctcagagagctctggcatcgtcccccagttacagaatattgtgtccactgtaaac
ttggggtgcaaacttgacttgaagacgatagcacttcgagccagaaatgctgaatataat
ccaaagcgttttgctgccgtcatcatgagaatacgagaacccagaacaacagcgctcatc
ttcagctcggggaagatggtgtgcacaggagcgaaaagtgaggaacagtcccgattagca
gccagaaaatatgccagagtggtgcagaagttgggttttcctgccaaattcttagacttc
aaaattcagaacatggtgggcagctgcgacgtcaagtttcccatccgattagagggcctg
gtgcttacacaccagcagtttagcagctatgaaccagagttatttccaggattaatctac
agaatgatcaaacctagaatcgtccttttaatattcgtttcaggcaaagttgtacttaca
ggtgcaaaggttagaggagaaatctatgaagcatttgagaatatataccccatcctgaaa
ggattcaggaagactacgtaa
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integrated database retrieval system