Labeo rohita (rohu): 127175575
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Entry
127175575 CDS
T09007
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127175575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lroh03016
]
127175575
03036 Chromosome and associated proteins [BR:
lroh03036
]
127175575
Transfer RNA biogenesis [BR:
lroh03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
127175575
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
127175575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
127175575
NCBI-ProteinID:
XP_050982683
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All DBs
Position
13:3056651..3168073
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AA seq
1187 aa
AA seq
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MAEPIRALCDELIKAVNVMMEAESSQTYRLEALKFIEDFKEKSPFCVECGLQLAEKSQTA
VVRHFGLQILEHVVKFKWNDMAPQEKLQLKNCTMGLLSDGTHPILQEECHVKDALSRIAV
EMIKREWPQHWPDMLKEMEALTAMGDTQTELVMLVLLRLAEDVITFQTLPTQRRRDIQHT
LTQNMDSIFTFLVGILQLHVNEYKKLNCIAGQELKAKAHWRVGVATLNTLAGYIDWVALV
HITSDNCRLLEIFCLLLSEPELQLEAAECLLIAISRKGKLEERKPFMVLFDEVAMNYILS
AAQSAGGAALCNQSSGGIVERRYTFLKRLCQVLCALGSQICSLVGSDIDVQVPVNLDKFM
EALFAFTTHPSQFLRSSTQMTWGNLFRHEILSKDPVVGQIAIKYLRAARINLVKTGFPSK
NDCPGCEFSRVDFDSDEDFNCSFNCFRAQQGEAVRLACKIVPFEAFQIAREWMQYQICTP
IDTGNTTSKTEKGLCRSPSVVQWDAMTFFTESVFGQLFKILEKEKIPIDEGMELLHMVVN
YETRDPLIQSCVLTIISTLFPFVTHQPHFLPQVLFKIFPSITFELVEECKAPRTRAVKNV
RRHACSSIIRICRDYSDFMLPCFDMMYEHVKRLFSNELLLTQMEKCALMEALILISNQFK
DYNKQKAFLKELMAPVTAQWLSEEMSSVLLDPATFLAYVGADQVVSDPDTEDQMGINRSR
ISFCVNTMLGVVKRARWPANSEEAKAGGFVVSTTSDGALIYRSPCVEPLQALLPNLFALI
RTQNSLFLPENINRLSKTFTGVYDITDVEKNFALGIPQPVLEGYDSSAYRNIAERMQGFF
SSLYDNCYHVLGNAGPCMQQDFYAIEGLAEQIIGSAFIHLDSVPDHRLRPLVRLFIKQLV
MSCPQNYYDSLLCPLLGPLFAYLLQRLNFRWQIINQRTSLCAQEEDEAYEENHVTQEVVE
EQLLRLVTREVMDLLSVTCITRKNPEVSANKEEVDGDEEMVSMDSSQGIQINASSDELSE
LGKCLLQSEDMYMTLLTICFNSLSWKDTINCQRSASVLCWTLLKQVLGCNLLPEAVTWLY
SSVLKGLQMHGQHEGCNAALTQLALLIYESLRPRYAELRFIMNQIPDIHVEALEQFDQKT
IQSTVSKAGEKKKKEQFKRLIAGTVGVWLLFFTLFTLSPVHIILHVI
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccgattcgtgcgttatgcgatgagcttataaaggctgtgaatgtgatgatg
gaggcagaatcaagccaaacataccgcctggaggcccttaagtttattgaagatttcaaa
gagaaaagtcccttctgtgttgaatgtggtcttcagttagcagaaaaatcacagactgca
gtggtcagacactttgggctgcagatcctggagcatgtagtcaagtttaagtggaatgac
atggcaccacaagaaaagctccagctgaaaaactgcactatgggcctgttatcagatggt
acacatccaattctgcaagaggaatgtcatgttaaggatgccctgtcacgcatagcagtt
gagatgatcaagagagagtggccgcagcattggcctgacatgctgaaggagatggaggcc
ctgactgctatgggggacactcagacggaacttgtaatgcttgtgctacttcggttagct
gaggacgtgatcacatttcagacattacccactcaaagacgacgagatatccagcacacc
cttacacagaatatggacagcatcttcaccttcctggttggcatactgcagcttcatgtg
aatgagtacaagaagttgaactgcattgctggtcaggaattgaaggcaaaagctcactgg
cgagttggtgtggccactctcaatactctggctggctacattgattgggttgctctggtc
cacatcaccagtgataactgccgccttttggaaatcttctgcctgttgctgagcgaacct
gagcttcagttggaggctgcagagtgtctactaattgccattagtaggaaaggaaagtta
gaggagaggaagccattcatggtactctttgatgaagttgccatgaactacatcctgtct
gctgcacagtcagcaggtggtgcagctctgtgtaaccaatcatcaggtggcattgtggaa
agaagatacacttttttgaagaggctgtgtcaggttctctgtgccctgggtagccaaatc
tgttctctagtgggttcagatattgatgtacaagttcctgtgaacctggataaattcatg
gaagcactttttgccttcactactcatcctagccagtttcttaggtcgtccacacaaatg
acctggggaaacctattccgacatgaaattttatcaaaggatcctgtagttggccagatt
gcgataaaatatttaagagcagcaaggatcaatctcgttaaaactggatttccttccaag
aatgattgtcctggttgtgaattctccagggtggactttgatagtgatgaagatttcaac
tgctcctttaattgttttagggctcagcagggggaagcagttcgtctggcttgtaaaatc
gtcccatttgaggccttccaaattgcaagggaatggatgcagtatcagatctgcacacct
atagatactggaaatacaacatctaaaacagagaagggtctctgccggtctccgtcggtg
gttcagtgggatgccatgactttcttcactgaaagtgtgttcggacagctcttcaaaatc
cttgaaaaggagaaaattcccatagatgagggcatggagctgctgcatatggttgtaaac
tatgagacaagagatcctctcattcagtcctgtgttcttaccatcatatccactctcttt
ccctttgtcacacaccaacctcacttcctacctcaagttctctttaagatatttccttcc
atcacatttgaattggttgaagagtgcaaggcacctcgaactcgagctgttaagaatgtc
agaagacatgcctgttcttccatcataaggatatgtcgagattattccgattttatgctg
ccgtgctttgacatgatgtatgagcatgtgaagaggttgttctctaatgagctgctgctg
acacaaatggaaaagtgtgctcttatggaagccctgatactaatcagcaatcagtttaaa
gattataacaagcagaaagctttcctgaaggaactcatggctcctgttactgcacagtgg
ctgtcagaggagatgagcagtgtgttattagaccctgctaccttcttggcatatgttggt
gctgatcaggtggtcagtgaccctgacacagaagatcagatgggtatcaacaggtcacgg
attagtttttgtgtaaacaccatgcttggggttgtaaagcgtgcccgttggcctgctaat
tctgaggaggcaaaagcaggaggctttgtggtcagcacaacttctgatggggccctcatc
tacagaagcccttgtgttgagcccctgcaggccttgctgcccaacctttttgctctcatc
aggacgcaaaatagcttattcttgccagagaacatcaaccgacttagcaagacttttact
ggggtctatgatattacggacgtggagaagaattttgctctaggaattcctcaaccagtt
ttagaaggctacgactcttcagcatacagaaacattgctgaacggatgcaaggcttcttc
tcctcactctatgataactgttaccacgtgcttgggaatgcaggtccctgcatgcagcaa
gacttctatgcaatagaaggcttagcagagcagattattggttctgcgtttatccatcta
gacagtgttccagaccacaggctccgcccccttgttcgtctgttcataaagcagctggtc
atgtcctgtcctcaaaattattatgacagcctcctctgtcctttgctgggcccactgttt
gcctatctgctgcagagactgaactttcggtggcagatcattaaccaacggaccagcctg
tgtgctcaggaagaggacgaggcctatgaagagaaccatgtgactcaggaagtggtggag
gagcagctgttgcgtttggtcacacgtgaagttatggaccttctaagtgtgacttgcatt
acaagaaaaaatccagaggtatctgcaaacaaagaggaagtagatggtgacgaagagatg
gtgtcgatggactcctcacagggaattcaaataaatgcatcctctgatgagctctcagaa
ttgggcaagtgccttctccagagtgaggatatgtatatgactctcctgactatatgtttt
aactccctttcctggaaggacactataaactgtcaacggagtgctagtgtgctttgctgg
actttgctaaaacaggtgcttggctgtaacctgctcccggaggctgtgacatggctgtac
tccagtgtactgaagggtctgcagatgcatgggcaacacgaaggctgcaatgctgcgcta
actcagctggccttgctcatctatgagtctctaaggcctcgatacgctgagctgcgtttc
atcatgaatcaaattcctgatatccatgttgaggccttggagcagtttgatcagaagacc
atacaatccactgtatcaaaggcaggagagaagaaaaagaaggagcagtttaaaaggctc
attgcaggcactgttggggtatggctacttttctttactttatttacattgtcacctgtg
cacatcatattgcatgtgatctag
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