Labeo rohita (rohu): 127175589
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Entry
127175589 CDS
T09007
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127175589 (chd7)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127175589 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
127175589
NCBI-ProteinID:
XP_050982701
LinkDB
All DBs
Position
2:15837441..15885223
Genome browser
AA seq
3139 aa
AA seq
DB search
MADPGMMSLFGDDGNLFSDELEGLGDCGYPQGQANPMSQQMPHEHQGYGQLPSSLHLSSP
AVPGQAKLGHHFDHFNQYEQPKMLPMDQQGGRMIGNGPVNGMSSPHSRYHGPPPGAGTSA
GHHVYPGTQGDGRSQSFPDGGNAWGAQAQAMQVPDQARPPFQQQPPQASSHQHGPAGPQG
HAHQMGPFIGRGDYAMQGHNQTQTPPRMNHFPQGVPQEANHFMGHVGMTQNPGMSGPPMR
HPAQPPQQHQQPNQQFLHRPGPGPVIPESVASHNPQFPQSPSRQQQPQQQQQVMGGRPHQ
NMGFNMHNQQVPSNTVNSSGQYPPYPSYGNLNQGLANTSGMSPNLSLTTSSNSNPNAPVT
QVQRYPAPTGPQRYPTPGAQQGPMHQQPIHVNQINTQPMHPAQNQATAQQKLQQQHLPPQ
GSYASPPSMSPMRNLATPAGTPPPQQGRPPSAGLGADVGGYPGVPHQSQGPMAHAQRGAC
PMNAAQQQHPHQQLPSHPSHPHPPPTQMYAALSPNHRATGAQGRPPAGPGTNHTEPQDQR
LLTQQAQRQQLQTPPLSFQQQQLQQVHTPPSIPPSQTHLAAHHQSSPPSQQAWAPPHQSP
PPMQKVPHMQHSPSDPSLEMITSSKTPASGPNLQPANCDIQQTESELKPKKKKKKKAKTS
EGQEGNDISGEAGGDAASLINEGDSLMTPVEQSVIEKKSKKKPKEKEPKEPKEPKTPKTP
KTPKTPKEPKEPKEKKVKTTTPKPKSSKKPSAKKSDTESSNSTKKDTKRKREPSVTSDVE
KSPPPSPEEEEDDGVQKRRSSRQVKRKRYTEDLEFRISDDDDDGDDSTGPKSPSATSEQQ
ELPDAEGPVVEKIMGMRVGKKELASGEEVNVEEFYVKFKGFSYLHCRWSDIEELEKDKRI
QQKVKRFKAKQALSNFLSEMDDEPFNPDYVEVDRVLDVSESTDENGELVTLYLVKWCSLP
YEDSTWELKADIDQGKIEEFERVMEREPQLKRVERPPASDWQKSESSREYKNGNALREYQ
LEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWE
REFRTWTELNVVVYHGSQASRKTIQAYEMYYRDTQGRVIKGAYKFHAIITTFEMILTDCP
ELRSVPWRCVIIDEAHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLE
PDRFPSESTFMQEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELTN
VQKKYYRAILEKNFAFLSKSGGGGGSSGGGGSNVPNLLNTMMELRKCCNHPYLINGAEEK
IMEEFRESHPLDHPEFHLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILED
YLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIF
DSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSG
RENAANGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIESEG
KGSTFAKASFVASGNRSDISLEDPDFWQKWAKKAELDLDVINGRNNLVIDTPRVRKQTRH
YSSMKEDDLMEYSELESDSEDKPIQKPRRPQDRTQGYPRSECFRVEKNLLVYGWGRWGDI
LSHGRFKRPLRERDVETICRALLAYCLLHYRGDENIKSFIWDLITPTEDGQSRTLTNHSG
LSAPVPRGRKGKKGKPQAAQTHMPQADWLADCNPDILLQEDSYKRHLKHHCNKVLLRVRM
LYYLRQEVIGDHADRILEGTDSSELDIWIPQPFHADVPTDWWDLDADKSLLIGVFKHGYE
KYNSMRADPTLCFLERVGMPDAKAIAAEQRGADMMADGVEGEDEDPEYKPLRMPFKDDLD
DFTNSPLDDKDDGMDGETGEAPKPGENGKAGNLYWPPASALTARLRRLITAYQRTHKREQ
LRQEAMTKPDRRRGRPRDDILAMVTEGGAYASDGAVAFMAEGGPFMAKGSPFMPDSAALL
ADGAAYFKERRQRWTRREEADFYRVVSTFGVVYDVHRQCFDWSQFRAFARLDKKTDESLE
KYYYSFVAMCKRVCRMQVKAETELPDPTLIIDPITEERASRTLYRIELLRRIREQVLPHP
QLDERLNLCQPSPDLPAWWEPGRHDRDLLRGAAKHGVSRTDYHILNDPELSFLEAHRKFT
QGKGAELPIVSDPLTPLNLLKDEEVKEEQGDALVPKVENGDLEEVKEEKPEGLSPKKEEE
ANDLGLTHEPKEEKMEVEEKDDAAEVKTKVEQGCPVDDMADEKPMIQEPTTPEDKMAQDE
KEPASTTEIKFSTDKTVKDDEDEKMDEDDKSEKSSQAEVGAASERKNFDEESNASLSTAR
DETRDCFSVDDVEPSASQMFSERSLFSFWPKDRVMINRMDNICEAVMKGKWPSNRRQFFD
FPGLLPGYSSMATDSPLQRRSLGDLSMVGQTSYSGSEDLTMSPQVNKDDALSLSVPRQRR
RRRRKVEIEAERAAKRRNLMEMVAQLRESHAAEGQAQAIDLTKALHGVSTSSSSAAAAFP
GAMASSAALKAQMELLQAGASSRPRANGSLLDTELPNRRKRGRRKNVEGLELLFMGNKRG
QLNAENSEGTKAFVDGRAHRPMSSPAHKAPVEALEEGSHLTGEDGPSTKDLREWLRQHPT
YTMDMPGYVPKNEDLLLSQFAKPKQKRHRCRNPNKIDINTLTGEERVPVVNIRNGRKMGG
AMAPPMKDLPRWLVENPEFAIAPDWTDIVKQSGFLPESMFDRLLTGPVVREEGVRRRGRR
PKSEIAKATAAAQAAAAAAAASTSGVNPLLMNGLFGGMDLTSLQGLQNLQSLQLAAGLMG
FPPALGGGVDAKHAAAMLPLMLPGMGGLPNMFSLGGLFGGNLAAAATATNGASGTEQAES
EENPKPKTDEETKDEGDENEEKEAEKSTETESAEATGDAAALNAAAAAATAGMSTNPLAF
NPFLLSTMAPGLFYPSMFLPPSLGGLGIAGFPQASLADLQSAVSGALGATGEDKESGKGP
RTNQDQNASTADVETADNTLEDSDSEESQNKTADSSVLDDDLAGPAEEIDSMEGGMDDED
DDDDDEDDDDPADEDDKSD
NT seq
9420 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccgggcatgatgagcctcttcggagacgacgggaatctgttctctgatgag
ttggagggcctgggggactgtggctacccccaaggtcaggcaaatcccatgagtcaacag
atgccccatgagcaccaaggctacgggcagctcccctcttctcttcacctctcctcacct
gctgtacctggacaggccaagcttggccaccattttgaccacttcaatcagtatgagcag
cccaagatgcttccgatggaccagcaggggggccggatgatagggaacggaccagtgaac
ggcatgtcctcccctcattcccgttatcacggtcctccgccaggtgcgggaacgtctgcc
gggcatcacgtctacccgggaacacaaggagatggacgaagccagtcattcccagatggc
ggaaacgcatggggcgctcaagctcaagcgatgcaggtgcccgatcaagctagaccccct
ttccagcagcaacctccacaagcctcgtctcatcagcacggccctgccggaccacaagga
cacgcccaccaaatgggcccttttatcggccgcggtgactatgccatgcagggccacaac
cagacccaaacacctcccagaatgaaccactttcctcaaggcgtccctcaggaggccaat
catttcatgggtcacgtggggatgactcagaatcccggcatgtcgggaccccccatgcgt
cacccggcacagcctcctcagcagcatcagcaacccaatcaacaatttcttcacaggccc
ggccctggcccggttattccggagtctgtcgccagccacaacccccagttcccacaaagc
ccttcacgacagcagcagccacaacaacagcagcaggtcatgggcggaagaccccaccaa
aacatgggatttaacatgcacaaccagcaagtcccttccaacactgtaaacagctcaggg
cagtaccctccctatccttcgtacggcaaccttaatcagggattagccaacacttcaggg
atgagtcccaacttgagccttaccaccagcagtaacagcaaccctaatgctcccgtgacc
caggtgcagcgctaccctgccccgacagggccccagcgctaccccacacctggggctcaa
cagggaccaatgcaccagcagcccattcatgtgaaccaaatcaacacccagcctatgcat
ccagcccagaaccaggctacagcccagcagaagctgcagcaacagcatctaccgcctcag
ggatcatatgcctcccctccttccatgtcgcccatgaggaacctggctacacctgcaggc
acccctcctccccagcagggtcgcccgcccagtgcaggtttgggagccgacgtgggcggc
taccccggcgtgccgcatcaatctcaaggcccgatggctcacgcccagagaggagcctgc
ccgatgaacgccgcgcagcaacagcatccccatcaacagctgccgtcgcatccctcgcac
ccgcatcctccgccgacccagatgtacgctgctttgtcgcctaatcacagggccacgggt
gctcaaggaagacctccagccggaccgggtacgaaccacacagaaccgcaggaccagagg
ctgcttacccagcaagcgcagcgccagcagctgcagacgcccccgttgtctttccagcag
caacagctgcagcaggtgcacacccctccctcgattcccccgtcacagacacacctggct
gcacaccaccagagctcccctccgtctcagcaggcatgggcacctcctcaccagtcgcct
ccacccatgcagaaagtgcctcacatgcagcattctccatcagacccttccctggagatg
ataacatctagtaagacacctgcctcgggcccaaacctccaaccagccaactgtgacata
cagcagacggagagcgagctcaagccaaaaaagaagaaaaagaagaaagccaagacaagc
gaaggccaggagggtaacgacatcagcggtgaggccggaggagatgcggcttctctgata
aacgagggagactctcttatgactcctgtcgaacagtctgtcattgaaaagaagagcaaa
aagaaaccaaaggagaaggagcccaaggaaccgaaagagcccaagactcccaaaactccg
aagactcccaagacacccaaagaacctaaggaacctaaggagaaaaaagtgaagacgacc
accccgaagcctaagagctccaaaaagcccagtgctaaaaagtctgacacggagtccagt
aacagcaccaagaaagacacaaagcgcaagagagagccctccgtcacctctgatgtggag
aaatcaccgccaccatcaccggaggaagaggaagatgatggtgttcagaagaggcgatct
agtcggcaagtgaagaggaaacgctacactgaggaccttgagttcagaatctctgatgat
gatgacgatggagatgattctaccggaccaaagtctccttcagccacttctgagcagcag
gagttgccggatgcggagggccctgtggtggaaaagatcatggggatgcgcgtgggaaag
aaagagttggcgtctggcgaagaggttaacgttgaggagttttatgtcaaattcaaaggc
ttctcttacctgcattgtcgctggtcagacatcgaagagctggagaaggataagagaatc
cagcagaaggtcaagaggttcaaggcaaagcaggccctcagtaacttcctaagtgagatg
gatgatgagcccttcaacccagattatgtggaggtggacagggttctggatgtgtctgaa
agcaccgatgaaaatggagagcttgtaactttgtacctggtgaagtggtgctccttgccc
tacgaggacagcacgtgggagttaaaagctgacatcgaccaagggaagattgaggagttc
gagagagtgatggagcgtgagccgcagctgaagcgcgtggagcgacctcccgccagcgac
tggcagaaatccgagagttccagagaatataaaaacggcaatgcgctcagggaataccag
ctggagggagtcaactggctgctcttcaactggtacaacacacgaaactgcattctagcc
gatgaaatgggccttggcaaaacaatccagtccatcacattcctctacgagatatacctg
aagggaatccacggtcctttcctggtgattgcacctctttccaccattcccaattgggag
agggagttcaggacgtggactgagctaaacgtagtggtttatcacggaagccaggccagc
cgaaagactattcaggcttacgagatgtactacagagacacacagggtcgtgtaataaag
ggagcatacaaattccatgcaatcatcaccacgtttgagatgatcctgacggactgcccc
gagctacggagtgtgccgtggcgctgtgtgatcattgatgaggctcataggctcaagaac
aggaattgcaagctgcttgagggcctaaagatgatggacatggaacacaaagtcctgctt
actggaaccccactgcaaaacacagtggaggaactcttcagtctccttaatttcctggag
cctgacaggtttccctctgagtcgaccttcatgcaggagtttggagatctcaaaacagaa
gaacaggtgcaaaaattgcagggcatcctgaagcccatgatgctgcgtcgactgaaggag
gacgtggagaaaaatcttgcaccgaaagaggagaccatcattgaagtggagctgaccaat
gtgcagaagaaatactaccgtgccattttggagaagaactttgccttcctatccaaaagt
ggaggcggcggcggcagtagcggtggtggaggatccaatgttcccaacctgctgaacacc
atgatggagctgagaaagtgctgtaatcacccctacctcatcaatggagctgaagagaag
ataatggaggagttcagggagagtcaccccttggaccacccagagttccacctccaggcc
atgatccaggctgcaggaaaactggtgctgatagacaagctgctccccaaactgaaggct
gggggtcaccgtgtgctcatcttttcccagatggtgcgctgtctggacatcctggaggac
tacctcatccagagacggtatccgtatgagcgtattgatggcagagttcgaggaaatctc
cgccaggcagctattgaccgcttttcacgaccagactctgaccgctttgtgttcctgctg
tgcaccagggctggaggcctgggtattaacttaactgcagctgatacttgcattatattt
gactctgactggaaccctcagaatgacttgcaggcacaagctcgatgccacaggatagga
cagagcaaggctgtgaagatttaccgcctgatcaccagaaactcctatgaaagggagatg
tttgacaaggccagtctgaagttaggattggacaaggctgtgcttcagtccatgagcggg
agggagaatgccgccaacggggttcaacagctctctaaaaaagagattgaggaccttctg
aggaaaggagcatatggcgctttaatggatgaggaggacgagggatctaagttctgtgaa
gaagacattgatcagattttgcagagacgaacacagaccattaccattgaatcagaaggc
aaaggctcaacatttgctaaggcaagttttgtggcctctgggaacagaagcgacatttct
ctggaggacccagatttttggcagaaatgggcaaagaaagcagaactggacctggatgtg
atcaacggcaggaataatctggtgattgacactcctcgggtccggaagcagactcggcac
tacagttctatgaaggaggatgatttgatggagtattcagagcttgagagcgactcagaa
gacaagcccattcagaaaccacggaggccccaggaccgaacccaggggtacccccgtagt
gaatgcttcagagtggagaagaacctgctggtgtatggctggggccgctggggtgacatc
ctgtcccatggccgcttcaagcgcccgctgagggagcgagacgtagagaccatctgccgc
gcactcctggcctactgcctgcttcactaccgtggagacgagaacatcaagagcttcatt
tgggacctcataacccctactgaggatggccagagccgcacactgaccaaccactctgga
ctgtctgctccagtgccccgggggcgtaaaggaaagaaggggaagccgcaggctgctcaa
actcacatgccacaagctgactggcttgctgactgtaatcctgacatccttcttcaagag
gacagttacaagagacacctaaaacaccactgcaacaaagtgctgctgcgggtccgcatg
ctctactatctgcgacaagaagtcatcggagaccacgccgacagaatcctggagggaacc
gattcaagcgagttggatatctggatcccacaaccgttccacgccgacgtccctactgat
tggtgggatctcgacgcggacaagtccctcctaatcggcgtctttaaacatggctacgag
aagtataactctatgcgtgctgaccccaccctgtgtttcctggagagggtgggcatgccc
gatgccaaggccatcgctgccgagcagaggggagcggacatgatggcagatggtgtcgag
ggagaggatgaggacccagagtacaagccactccggatgccgttcaaagacgatctggat
gatttcacaaactctcctctggatgataaagacgatgggatggatggtgaaaccggagaa
gcacctaagcctggtgagaatgggaaagcaggcaatctgtactggccaccagcctctgcg
ctgactgcacgattgcgccgcctcatcacggcctaccagcgcactcacaaacgtgagcag
ctaaggcaggaagccatgaccaaacccgaccggcgccgaggccgtccgcgtgatgacatc
cttgccatggtaactgagggaggagcttatgcttcggatggagcggtggctttcatggct
gaaggagggcctttcatggctaagggatcacctttcatgcccgacagcgccgccctgctg
gctgacggagcggcttattttaaagagcgacggcagagatggacaaggcgtgaagaggcc
gatttctaccgtgtggtatccacattcggcgtggtttatgacgtgcacagacagtgcttt
gactggtcccagttccgtgcgtttgctcgtctagacaagaagacagacgaaagcctggaa
aaatattactactcttttgtagccatgtgcaagcgggtgtgtcggatgcaggtcaaagct
gaaacagaactgccagaccccaccctcatcattgaccccattacagaagagcgggcttca
cggacgctctatcgtatcgagctgctgcggcggatcagggagcaggtgttgccgcaccct
cagctggatgagaggttgaatctctgccagcccagccccgacctcccagcctggtgggag
cccggacgccatgaccgagacctcctgcggggtgccgcaaagcacggtgtcagccgcact
gattaccacatcctcaacgaccccgagttgagcttcttggaggcccatcggaagttcaca
cagggcaagggtgccgagctgcccatcgtgtctgatcctcttacacctctgaacctgctc
aaagatgaggaggtgaaggaagagcagggagatgcgttggtgcccaaagtggagaatggt
gacttggaggaggtcaaagaagaaaaacctgaaggcctctctcctaaaaaagaagaggaa
gcaaatgatttgggtcttacacacgagcctaaagaggaaaagatggaagtggaggagaaa
gatgatgcagcagaggttaagaccaaggtagagcagggttgtcctgtggatgatatggct
gatgagaagcccatgattcaggagcccacaacccctgaggacaaaatggctcaggatgag
aaagagccagcgtcaaccactgagattaaattttctactgacaaaactgttaaagatgat
gaggatgaaaagatggatgaggacgacaaatcagaaaaatcttcacaagctgaagttgga
gccgcctctgagaggaagaatttcgatgaggagagtaacgcctccttgagcacggcccgt
gatgagaccagggactgcttcagcgttgatgacgttgagccgtcagcttctcagatgttt
agtgaacgttcactgttctccttctggcccaaggacagggtaatgatcaatcgtatggac
aacatctgtgaagcggtcatgaagggcaagtggccttccaacaggaggcagttctttgac
ttcccaggcctgttgcctggctacagctccatggcaacggacagccccctgcagaggcgg
agtcttggtgatctctcaatggtgggtcaaaccagctatagtggcagtgaggacctcacc
atgtcacctcaggtcaacaaggacgatgctttgagcctgtcagtacctcggcagcgcaga
cgcaggaggagaaaggtggagatcgaggcagagcgtgctgccaagcgcaggaacctcatg
gagatggtcgctcagttacgagagtcccatgctgcagaaggccaagcacaggccatagac
ctgaccaaggccttgcacggcgtgtccacctcctcctcctccgccgctgctgccttccct
ggagccatggcctcctccgcagccctgaaagcacagatggagcttctgcaagcaggcgct
tcctctagaccaagagccaacggctctctacttgacactgaactccccaaccggagaaag
agaggtcgcaggaaaaatgtggaggggttggaactgctctttatggggaacaagagagga
caactcaatgcggaaaattccgaagggaccaaagctttcgtggatgggcgggcacataga
cccatgtcatctcctgcacataaagctcctgttgaagccctagaagagggaagccatctt
acaggagaagatggacccagcactaaggacttacgggagtggctaagacagcaccccact
tacactatggatatgcctggatatgtaccaaagaatgaggacctcctcctctctcagttt
gccaagcccaaacagaagagacacagatgccgcaatcccaacaagatcgacattaatacg
ctgactggggaggaaagagtccctgttgttaacattagaaatggaagaaagatgggaggc
gccatggcacctccaatgaaggatttaccccgctggctggttgaaaatccagaatttgct
atcgccccagactggacggatattgtgaagcagtcgggctttctcccagagtccatgttt
gaccgtcttctgactgggccagtagtcagagaggagggcgtgcgccgcagaggcaggcga
cccaaatccgagatagcaaaggcaacagcagcagcccaagcggcagccgccgcagcagct
gcttccacgtccggcgttaatcctttactgatgaatgggctgtttggaggcatggacctg
accagtctgcaaggcctgcagaacctccagagcctccagctggctgctggcctcatgggc
tttccccctgctctcggagggggagtggacgccaagcacgctgcagccatgctgcctctc
atgcttcctggcatgggcggcctccccaacatgttcagcctgggaggtctgtttggagga
aacctggccgctgctgcgacggccaccaatggcgcctctggcacagaacaggccgaatcc
gaggagaatcccaagccgaagactgacgaggagaccaaggacgaaggagatgagaacgag
gagaaggaagcggagaaatcgaccgaaacggagtctgctgaggcaaccggtgatgcagcc
gcgctgaacgcggcagccgctgccgccaccgccggcatgtccaccaacccgctggccttc
aaccctttcctgctgtccaccatggccccaggcctcttctacccatcaatgttcttaccc
cccagccttggcggcctgggcattgcaggcttcccccaagcttctctagctgacctccag
agcgccgtgtccggggccttgggggccaccggcgaggacaaggagtccggtaaagggccc
cgcacaaatcaggaccagaacgcctccacagctgacgtggaaactgctgacaacacactt
gaagacagtgactcagaggagagccagaacaagactgctgattcatcagtgctagatgat
gacctggcagggccggcagaggaaatagactccatggagggtggaatggatgatgaggac
gatgatgatgatgatgaagacgatgatgaccctgctgatgaggatgacaaaagtgactaa
DBGET
integrated database retrieval system
