Labeo rohita (rohu): 127175606
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Entry
127175606 CDS
T09007
Symbol
si:dkey-33c12.3
Name
(RefSeq) neurofilament light polypeptide
KO
K04572
neurofilament light polypeptide
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lroh01009
]
127175606 (si:dkey-33c12.3)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127175606 (si:dkey-33c12.3)
Protein phosphatases and associated proteins [BR:
lroh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127175606 (si:dkey-33c12.3)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
127175606 (si:dkey-33c12.3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DUF1664
Pox_A_type_inc
TPR_MLP1_2
ATG14
TMF_DNA_bd
Phage_GP20
Bacillus_HBL
Filament_head
DUF1002
Seryl_tRNA_N
Golgin_A5
HMMR_N
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
127175606
NCBI-ProteinID:
XP_050982720
LinkDB
All DBs
Position
13:11425705..11428962
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AA seq
389 aa
AA seq
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MSFDPFISSSLSRRWQDPPSSRTTYRLSRGPLSSSRWPTTRLEPLQRWEQSELSQASIVN
AELLELRAQEREQLVGLNNRFASYIEKVRHLEQQNRVLLLQLEGLRRRQSQPSRVQQLYL
QEVRGLREQLHQEAQNKARMEAQREKLREAHAQLHDRWEEEAQRRSRAEAEVQRLREEAG
QVALCSCDAEASVVSLAQELAFLKQVFAEEQEGLRVQLQVASLSVELDTSRPDLSAALRE
IRAQYESLAGRNMQTAEAWFRGKVASVVELTDKQEEAVRLVREETAEYRRLLQSRSAEVE
ALRNVIDSLNAQLGELEETQNSEVTKYQEKISDLERDIADAKEEMSRYLREYQDLLNVKM
ALDVEIAAYRKLLEGEEIRFTYSTLPALA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgacccgttcatctcctcctccctctcccggcgatggcaagatcccccctcc
agcagaaccacataccggctctctcgggggcccctgtcatcctctaggtggccgaccaca
cgtttggagccgctgcagcgctgggagcagagtgaactgagtcaggcgagcatagtgaat
gcagagctgctggagctgcgggcccaagagcgagagcagctggtggggctgaacaatcgc
ttcgcatcctacatcgagaaggtgcgacaccttgagcaacaaaaccgggtgctgcttcta
cagttggagggcctgcggcgcaggcagagccagccgtcccgtgtgcagcagctctaccta
caggaggtacggggcctcagggagcagctgcaccaagaggcccagaataaagcacgcatg
gaggcgcagagggaaaaactgcgggaggcacacgcacagttgcacgaccgctgggaggaa
gaggcgcagcggcgtagtcgggcagaggcagaggtgcagcggttgcgggaggaggcgggt
caggtcgctctgtgcagctgtgacgccgaggccagcgtggtctccctggcgcaggagttg
gccttcctgaagcaagtgtttgcggaggagcaggaggggctgagggtccagctacaggtt
gccagcctcagcgtggagctggacacaagtagaccggacctgtcggctgctctgagagag
atccgagcgcagtatgagagcctggctggacgcaacatgcagaccgccgaagcctggttt
cgggggaaggtggcgagcgtggtggagctgacagataagcaggaggaggctgtgcgcttg
gtacgtgaggagaccgctgagtatcgacggctgctgcagtcccgttcggctgaggtcgag
gctctgaggaatgtcatcgattcgctgaatgcacaactaggggagctggaagagacgcag
aactccgaggtcaccaagtaccaggagaagataagtgacctagagagggacattgcagat
gcgaaagaggaaatgtcacggtatttgagggagtatcaagatctgcttaacgtgaagatg
gctttggatgttgagattgcagcttacaggaaacttctggagggagaagaaattcgattt
acatattccacccttccggcccttgcctaa
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