Labeo rohita (rohu): 127175621
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Entry
127175621 CDS
T09007
Symbol
npas4l
Name
(RefSeq) neuronal PAS domain-containing protein 4-like
KO
K26457
neuronal PAS domain-containing protein 4
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127175621 (npas4l)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127175621 (npas4l)
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_11
PAS_3
PAS
PAS_4
Motif
Other DBs
NCBI-GeneID:
127175621
NCBI-ProteinID:
XP_050982750
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All DBs
Position
13:36478100..36484642
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AA seq
600 aa
AA seq
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MSCDTSVRRILRASKRFRSTKGASKARRDHINGEIRIMRALLPISAEDQERLSYLHSMSL
ICTYVRKSVLLTGVHEDGGGASPLYESFLQALPGFIVALTRDGKLVYVSENVPEYLGLSM
VDVLQGDTFYDMMDSRDAEAARLILRERGVSAERGFVCRMHTSKAFRLQYGSCCSMLVRG
RFQDGPPNAALFVALCTPTVNRLKDSELLSASACFQTLHGPDMRLTHAPYSVLFHLGFSA
EELIGRSWYELLHPDDLTLAAGCHRLLIGDDGDASGEMLIRLQCKDLSWICLYVCASMDG
ARESIACTNHVISEAEAVYLKDKLYGSALTSQTVCGAPESRRPVRSAKTTRETLGRSSET
SDVQRSVGTDAELRSASLAVVEQPAFFSTPPYSPTSSHSSDFLSDGYGAFEQLADGFCPS
QAFPRPFSDPSCAVSPVSLPDAHLVPVYRPVLDVCEGASDCVLHPEDFGVFALPQDGGPL
TPEPSPTADGRFLYSETERAEIGTLACQIRSLASSFDAYGATHRPQPDGALCWPPASEPL
LDETVIDSILRDLISAKEPDCAWNRSGVGASSAEPGVCRQTNGEPRRLHQCVYGGDRTAF
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcgacacgagcgtcaggcggattctgcgcgcgtccaaacgcttcaggtccact
aaaggggcgtccaaagcccggcgagaccacatcaacggagagatccggatcatgcgggcg
ctgctgcccatctcggctgaagaccaggagcgtctgtcctacctgcactccatgtctctc
atctgcacctacgtcaggaagagcgtgctcctcacaggtgttcacgaggacggcggtgga
gcttctcctctgtatgagagcttcctgcaagcgctgcctggatttattgtcgctttgacg
agagacgggaaactggtgtacgtgtctgaaaatgtgccagaatatctcggcctgtccatg
gtggacgtccttcagggagacacgttctacgatatgatggacagtcgtgacgcagaagcg
gcgagactcattttgagagagcggggcgtctcagcagagcgcggtttcgtgtgtcgcatg
cacacctccaaagcgttccggctccagtacggcagctgctgctccatgctggtgaggggg
cgtttccaggacggcccgccaaacgccgctctgtttgtggccctctgtacgcccacagtc
aacagactgaaggacagcgagctcctcagcgcctccgcctgcttccagacgctccacggg
ccggacatgaggctcactcacgccccctacagtgttttgttccacctgggtttctcggca
gaggagctgattggtcgatcgtggtacgaactcctgcatccggatgatctgacgctcgcc
gccggctgccatcggttgcttattggagatgacggcgacgcgagcggagagatgctgatc
cgactgcagtgtaaggatctgtcgtggatctgcctctacgtatgtgcgtcaatggacgga
gccagagaatcgatcgcctgcacaaatcacgtcatcagcgaagcggaggccgtctatctc
aaagacaaactctacggctctgcgctgacgtcacagacggtttgcggcgctccggagtct
cggcgtcccgtccgctcggcgaagacaacgagagagacgctcgggagaagctcggagacc
agcgacgtccagcgatccgtcggcacagacgcggagctcaggagcgcgtcgctcgcggtc
gtagagcagccggccttcttctccaccccgccgtacagccccacttcctcccactcctct
gacttcctgtctgacggctacggcgcgttcgagcagctggcggatgggttctgcccgtct
caagcgttccctcggccgttctccgacccgtcctgcgccgtttctcccgtctctctgcca
gacgctcatctggtccccgtctaccggcccgtgctggacgtctgcgagggcgcgtcggac
tgcgttctgcatccggaggactttggcgtgttcgctcttcctcaggacggcggtccgctc
acgcccgagccctcgcccaccgccgacggacgcttcctgtacagcgagacggagcgggcc
gagatcgggacgctggcctgtcagatccgctctctggccagcagcttcgacgcctacggc
gcgacacaccgaccccagcccgacggcgccctctgctggccgcccgcgtccgagccgctg
ctggacgagaccgtcatcgacagcatcctgagagacctgatctcggccaaagagccggac
tgcgcctggaaccggagcggggtcggagcgtcctcggcggagcccggcgtctgccgtcag
acaaacggtgagccgcgtcggctccatcagtgcgtgtacggcggcgaccggacggcgttt
tga
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