Labeo rohita (rohu): 127175808
Help
Entry
127175808 CDS
T09007
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03020
RNA polymerase
lroh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127175808 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
127175808 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lroh03021
]
127175808 (polr2b)
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127175808 (polr2b)
Enzymes [BR:
lroh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127175808 (polr2b)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
127175808 (polr2b)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
127175808 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
127175808
NCBI-ProteinID:
XP_050983044
LinkDB
All DBs
Position
14:complement(20228254..20243561)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDQDEDIQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKDGEEQQQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEVLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENDDELDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLKERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatcaagacgaagatatccaatatgatgaagatgatgatgaaatcacccctgat
ctgtggcaggaggcctgttggattgttatcagctcatactttgatgaaaaaggtttggtg
cgacagcagctggactcatttgatgagttcattcagatgtctgtgcagaggattgtggag
gatgctccacccattgacctgcaggccgaggcccagcacacatctggagaggtggaagaa
ccgcctcggtacctactaaagtttgagcagatctacctgtccaaacccactcactgggaa
agagatggtgctccctcacctatgatgccaaacgaagccagactccgaaatctcacgtat
tctgcccctctgtatgtggatatcacaaagaccatcataaaggatggggaagagcaacag
cagacacagcatcagaaaacatttataggcaaaattcccatcatgcttcgttccacgtac
tgtcttctgagcggcctgacagatcgtgatctttgtgagttgaacgagtgcccactggac
cctggaggctacttcatcatcaatggttcagagaaggtcctgattgctcaagagaagatg
gccactaacacagtgtatgtgtttgccaagaaagactccaagtatgcttacacaggagag
tgcaggtcatgtctggaaaactcctccagacccaccagcaccatctgggtcagcatgatg
gcccgtggagggcagggagtaaagaaaagtgccatcggccagaggattgtttccactctg
ccgtatatccggcaggaagtacccatcatcattgtattccgtgctttgggatttgtgtcc
gatagagacatcctggaacatatcatctatgactttgatgatcctgagatgatggaaatg
gtgaagccgtctttggatgaggcttttgtgattcaggagcaaaatgtggctctgaacttc
attggctccagaggggccaaacctggtgtcaccaaagagagaagaatcaaatatgctaag
gaagttttgcagaaggaggtgttgccacatgttggtgtatcagatttctgcgagaccaag
aaagcatattttctaggttacatggttcacagactattgttggccgctctgggcagacga
gagctggatgacagagatcattatggtaacaagaggcttgatcttgctggacctctgctt
gcgttccttttcagaggaatgttcaagaatctgctgaaggagatcaggatctatgcacag
aagtttattgacagggggaaagactttaatctcgagctggccattaagactcgcatcatt
tctgacggactcaagtactctctggccacaggcaactggggggatgtaaagaaagcccat
caggccagagctggagtgtctcaggtgttgaaccggttgaccttcgcttccactctttcc
catctgcgccgtgtgaactctcctataggacgagatggcaaactggccaaacccaggcag
cttcataacacactgtggggtatggtgtgccctgctgagaccccagagggccatgctgta
ggtttggtgaagaatctagcgctcatggcctacatttctgtgggatctcagccatccccc
atcctggagttcttggaagagtggagcatggagaacctggaagaaatctcacctgctgcc
attgctgatgcaactaagatttttgtgaatggctgctgggtgggtattcataaggatccc
gagcaactgatgaacacactgcggaaactgaggagacagatggacatcattgtgtctgag
gtgtcaatgatcagagatattcgtgagagggagatcaggatctacacagacgctggtagg
atctgccgtccgctgcttattgtagaaaaacagaaactacttctaaagagaagacatatt
gaccagctcaaagagagagagtacaacaactacagttggcaggatctggtagccagtggt
gtggttgaatatattgacacgctagaggaggagacggttatgttggccatgacccccgat
gaccttcaggagaagggtgtggcttattgttccacctacacacattgtgagatccatcca
tccatgattttgggcgtctgtgcatctatcattcccttccctgatcacaaccagtctccc
agaaacacgtaccagtctgctatgggtaaacaagccatgggagtttacatcaccaacttc
catgtacgtatggataccctggcacatgtgctctactacccccagaaaccccttgtcacg
actcgttccatggagtacctgcgctttagagagctgccggcaggtatcaattccattgtg
gctattgcatcatatactggatacaaccaggaagattctgtcatcatgaaccgttcggct
gtggatcgtggattcttcaggtctgtgttctaccgctcatacaaggaacaggaatctaag
aagggctttgaccaggaagagatctttgagaaacccactcgagagacctgtcaaggcatg
cgacatgccatctatgacaagttggatgacgatggtttgattgctcccggtgtacgtgtg
tctggcgaggatgttatcattggtaaaactgtaactcttcctgagaatgatgatgagctg
gatagcaccaaccgtcgctacacaaagagagactgcagcacgttcctgcgcaccagtgaa
accggaattgttgaccaagtcatggtcaccctaaaccaagagggctacaagttctgcaaa
attagggtccgttcagttcgtataccccaaattggagacaagtttgccagtcgtcacggt
caaaagggtacctgcggtatccagtacagacaagaggacatgccattcacatgtgaagga
atcactccagatatcatcatcaaccctcacgccatcccctccagaatgacagtcggccat
ttgatcgagtgcctgcaggggaaggtgtctgctaacaaaggggagattggtgatgccaca
ccattcaacgatgctgtgaatgtacaaaaggtctccaacctgctgtcagaatatggttac
catctgagaggcaatgaggttctgtataatggcttcactggccgtaagctcacctctcag
atcttcatcggacccacatactaccagcgtctgaaacacatggtggatgataagatccac
tccagagcccgtggtccagttcagatcctcaacagacagcccatggagggtagatcacgt
gatggtgggctgcgttttggagagatggaacgtgattgtcaaatcgctcacggtgctgct
cagttcctaaaagagaggcttttcgaggcctccgacccataccaggtccacgtctgcaat
ttatgcggcctcatggccatcgcaaacacccgcacgcacacatacgagtgcaggggctgt
cgcaacaagacacagatctctctggtgagaatgccatatgcctgtaagctgttattccag
gagctgatgtctatgagcattgccccacggatgatgaccagctaa
DBGET
integrated database retrieval system
