Labeo rohita (rohu): 127175837
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Entry
127175837 CDS
T09007
Symbol
zeb1a
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127175837 (zeb1a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
127175837 (zeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-met
zf-C2H2_15
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
127175837
NCBI-ProteinID:
XP_050983086
LinkDB
All DBs
Position
2:complement(31013082..31041944)
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AA seq
1209 aa
AA seq
DB search
MADGPRCQRRKQTQPRRNNVRSFSSVPEATSDSDDEDKLHIVEEDSIADDPDQKSSVFQL
KAARQLSETCTQDDGSLGPDALIQEIRVKEECVTDEEDGADDEVAGEEKQTETEHIYSDA
PDEQQRTPERGVHDENGTPDAFSQLHTCPHCSRGYKRHTSLKEHIKLRHEKSEDNYCCSL
CSYTFTYRTQLVRHMTAHRHVREQRSISQSGGNRKFKCTECSKAFKYKHHLKEHLRIHSG
EKPYECSNCRKRFSHSGSYSSHISSKKCASVTPAVNGLPRTPGVKTALTVSRSTHILLRE
KADITNKPLQEQLPLKQIKQEPVEQQPKPVSATPSIAATTTTTNGVMAPQGVVQTLVLPT
VGLVQPISINLSDLQNALNAAMDGNVIRQVLTSTNANGTSAKIVGQMPAQPQAQAVVLQP
QQAQPQVISAISLPVVGQDGNAKIIINYNPQLESQLKAVKVNPTQPTATQTSIAQAKSTQ
ANVVQLQSVHSSSTETQTSGTPKPTQVNIIKPVQTGNLSKPPSIIKITPAQAARLVQARA
AQPKLTQQTLLLVRRADGTQSLVVRQIPVANSNTQSTETKSTPDKTTTTPPAENTTTETT
ESTGSLEDKCVIQNLTAPPEIKIKTEPASPSKIEQSEEDKEMQTDENQEGGKQTTATTEP
VEHSGTVHSGVACGDNFHNYATCLLCDSSPSKRKPSDSQDGDAKGSPTTISLSSLLDKDK
SGAAERLLPLLKAYSQNPEPTEEQLSQVAKTVKLPLEAVSKWYQKMRSKKILLQAAGNQK
KNQEKTTPSAAPEGMNSTQATCTPTPPPEGTSADTQNGSAASPASPPASVSTDDLVIVKT
EDVEEELQCEPLDLSLPKSSSAQASTTTKLSVSTQKEPLNLTCLKKQPLPGNTIYVTQGG
TGPLNIVTTPLPTLVAIAEPGGVPCIGTAISGNKRTILIPQLTYTYTTNPSIKTPDNALT
ETKGTVILNNCPKVADTASDCVSEDQNDEDSPLMKKKRKTVGGLYACDLCDKIFQKSSSL
LRHKYEHTGKRPHECGICNKAFKHKHHLIEHTRLHSGEKPYQCDKCGKRFSHSGSYSQHM
NHRYSYCKRDTHELPEQVSTSTPPSQLDSDERESDGEEEEDLTALDMSDIRVVQVGDDYE
DEEESGGEEEQERGHEEQETEEGGMVMEVELGDTDTLEEETVETENAMETQEDAVLRNND
ENTEMATED
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgccagcgtagaaaacagacacagccacgacgcaacaacgtg
aggagttttagcagtgtgccagaggcgacctcagattcagatgatgaagacaaactgcac
attgtagaggaggacagtattgctgacgatcccgaccaaaagtcctcagtattccagctc
aaagcagcaaggcagctctctgaaacatgcacacaagatgatggcagcctggggccagat
gctttaatacaagaaataagggtcaaagaggagtgtgtcactgatgaggaagatggtgct
gatgatgaggtggccggtgaggaaaagcagacggaaacagagcatatttactcagatgcc
ccagatgagcaacagagaacgccagagcgaggggttcacgatgagaacggtactcctgac
gcattttcgcagctgcacacctgtccgcactgttcccgcggttacaagcgtcatacgtcg
ctgaaggagcacattaaactacgccatgaaaagagcgaggacaactactgctgctctctc
tgtagctacaccttcacttaccgcacacagctcgtccgtcatatgaccgcgcacagacac
gtccgggagcagcggagtatttcgcagtcgggcggaaacagaaagttcaagtgtacagaa
tgctccaaggccttcaaatacaaacatcacttgaaggagcacctacgcatacacagcggt
gaaaagccatatgagtgctctaattgtcggaagcgtttctctcactcggggtcctacagc
tctcacatcagcagtaagaagtgtgcgagcgtgacccctgcggtcaacggcctgcctcgc
acacctggagtgaaaacggctcttacggtttcacgctccacacacatccttctaagggag
aaggcggacattaccaacaagcctctgcaagagcagctccccctgaaacagatcaaacag
gagcctgtcgaacagcaacccaaacctgtgtcagcaactccctcgatagccgccaccacc
accactaccaatggagtcatggctccgcaaggcgtcgtccaaacattggtcctgcccact
gtcgggcttgtccagccaatcagcatcaacctaagtgacttacaaaacgcgctgaatgca
gcgatggacggtaatgtcatcaggcaggtgttgaccagcacaaatgcaaatggaacgagt
gctaaaatcgtaggtcaaatgccagcgcagccgcaggcgcaagcggtcgtgttgcagcca
cagcaggcgcagccgcaggtgatctctgccatctctttgccagttgtgggacaggacgga
aatgccaaaattatcatcaactacaacccacagctggaatcacaactcaaggctgtgaaa
gtgaacccaacgcaacccacagcgacgcaaaccagtatagcgcaggcaaaatctacacag
gcaaacgtggtgcagcttcagtcggtacactctagctcgactgaaacccaaacatcaggg
acaccgaaacctacacaggtaaacatcattaaaccagtccaaacaggaaacctcagcaaa
ccgccatctatcatcaaaataacgcctgcgcaggccgccaggttggttcaagctcgggcg
gcacaaccaaagctcacccagcaaactttgctgctggtgagacgggcagatgggactcag
agccttgttgttcgacaaatacctgttgctaattccaacacgcaaagcacagagacaaaa
tcaaccccggataagacaacaaccactcctccagcagagaacaccacaactgagacaaca
gaaagtacaggttcgctggaggataaatgtgtaatacaaaacctcaccgccccaccagaa
atcaaaatcaaaaccgaaccagcctctccgtccaagatcgagcagagtgaagaggacaaa
gagatgcagacagatgaaaatcaagaaggagggaaacaaacaacagcgacaactgagcca
gtcgaacactctggaacggttcacagcggcgtcgcctgtggagataactttcataactat
gcgacatgtctgctttgcgacagctccccgagcaaacgtaagccttcggacagtcaagat
ggtgatgccaaagggtcgcccacaactatttctctctcctctttactggataaggataag
agtggagcagcagaacgcctccttcctcttctcaaggcctacagtcagaacccagagcct
actgaggagcagctgtctcaggtggccaagacagtgaagttaccactagaggcggtcagc
aagtggtaccagaagatgcgctccaagaagatattgctccaggctgcaggcaaccagaaa
aagaaccaagagaaaactacaccatctgctgcacctgaaggaatgaactccactcaagcc
acctgcactcccactccaccccctgaaggcacatcagcggacacccaaaatggaagcgcc
gcttcacctgcctcccctccagccagcgtctccaccgatgatctcgtcatcgtcaagaca
gaagacgtagaggaggagctgcagtgtgaacctctggatctctcgctcccaaagtccagc
tccgctcaagccagcaccaccactaagctgtcggtctccacccaaaaggaaccgctcaac
ctcacctgccttaagaagcaaccgttgccaggcaacaccatctatgtgacgcagggtgga
acaggtccattaaacattgtgacaacgccattgccaactctggttgccatagcagagcca
ggcggtgttccgtgcataggcacggcaatatccggtaacaaacgaaccatactcatccct
cagctcacctacacctacaccaccaaccccagcatcaaaacgcctgacaatgccttgaca
gaaacaaaggggacggtgatactcaacaactgtccgaaggtggcggacacggcttcagat
tgcgtgtcagaggaccagaacgatgaagattcaccactaatgaagaaaaaaaggaagact
gtcggtggcctgtacgcctgcgatctgtgtgacaaaatcttccagaagagcagctcactg
ctgcgacacaagtatgaacacacaggtaagcggcctcatgagtgcgggatctgtaataag
gctttcaaacacaagcaccacctgatcgagcacacgcgactacactccggagagaagccc
taccagtgtgacaagtgcgggaaacgcttctctcactctggctcttattctcagcacatg
aaccatcgatactcctactgcaagagagacactcatgagctgccagagcaggtcagcacc
tccactcctccctctcaactcgactcggatgagagagagagtgacggagaggaagaagag
gatttaaccgctctggacatgagtgatatcagagtggtgcaggtgggagacgattacgag
gatgaagaggagagcggcggagaggaagagcaggaacgaggacacgaggagcaagagaca
gaggaaggaggaatggtgatggaagtggagcttggagatactgacactttggaggaggaa
acggtggaaactgagaatgctatggagacgcaggaggacgcagttctcagaaataatgac
gaaaacacagaaatggcaaccgaggactga
DBGET
integrated database retrieval system
