Labeo rohita (rohu): 127175883
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Entry
127175883 CDS
T09007
Name
(RefSeq) TBC1 domain family member 9B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127175883
Membrane trafficking [BR:
lroh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127175883
Endosome - Golgi transport
Rab GTPases and associated proteins
127175883
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_7
Ric8
Motif
Other DBs
NCBI-GeneID:
127175883
NCBI-ProteinID:
XP_050983147
LinkDB
All DBs
Position
14:24843173..24866881
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AA seq
1227 aa
AA seq
DB search
MWITPEEVLLANALWVSERANPYFILQRRKGHGRGGGITGLLVGTLDVVLDSSARVAPYR
ILHQTGESQIFWNIACGSSRKEITEHWEWLETNLLQTLSIFDNDDDITTFVKGKIQGIIA
EENKSGKPQEDEDPGKFREAELKMRKLFGMPEEEKLVNYYPCSYWKGRVPRQGWIYLSVN
HLCFYSFLLGKEVSLVVQWTDVTQLDKNATLVFPESIRVSTRDTEHFFSMFLNINETFKL
MEQLANIAMRQLLDNESFSADRSLPKPCKTLKNVSALKRDLDARAKNERYRALFRLTQDE
RLDGHTDCTLWTPFAKMHVVGQMFVSNNYICFASREEDLCQLIIPLREVTIVEKADSSSV
LPSPLSISTKNKMTFLFANLKDRDFLVQRISDFLQRTPDKPCGLNTQSENPSPSTPPSLP
PSPPVLGFGEMPQNQHYSPSLPTAKKGLLQIYQQDVPEELGPKVTREKMKEESWNIHFFE
FGRGVCMYRTSKTRELVLNGIPESLRGELWLLFSGAQNEMSTHPGYYASLVEQAMGKCTL
ATEEIERDLHRSMPEHHAFQNEMGIAALRRVLTAYAYRNPSIGYCQAMNIVTSVLLLYCT
EEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELTRECLPLLYEHMQDLGVISTISL
SWFLTLFLSVMPFDSAVLLVDCFFYEGIKVIFQVALAVLHANMDQLLSCSDEGEAMTILG
RYLDNVVNKQTVSPPIPHLHALLTSGNNPPPEIDVFELIKASYEKFGSLRADVIEQMRFK
QRLKVIQSLEDTAKRSVVRAIMTESAFTIEELEELYVLFKAKHIMSCYWGASSTAAERHD
PSLPYLEQYRIDCGQFIQLFSALAPWSCGLHTNTLSSRLFRLLDQNKDSLINFKEFVTGL
SGMYHGDMTEKLKLLYKLHLPPALCPEEAESALEATQFFTDDDTPQDPPFLSHLDFLAQE
VTSGEELKEAGDASAAGDTDEKKEEKPKDYKYYLRMWAKEKEPKKESIKDLPRMNQEQFI
EMCKTLYNMFSEDPMEQELYHGIATVASLLLRIGEVGKKFTNNGGKKTEPQLPSAVDALQ
PEKEDSSGGSGQSLVSKALAEAQLETPPPTAAGSDEEAKDDTSVSSYSVVSAGSLQCEDI
ADDTVLIGCVGGDGVDRRRGSAPDADWSITFEQVLASFLTETSLVDYFEKKHDIQSKITA
CKSLRAVERQTSTSSDHDFSLNTLTHS
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgtggattaccccggaggaggtgttactagccaacgcgctgtgggtgagcgaacgggcg
aatccgtatttcatcctgcagagaaggaaggggcacgggcgcggaggaggcatcacgggt
ttgctggtgggtacgttggatgtggtgttggattcgagtgctcgcgtggctccgtacagg
atcctgcatcagacgggagagtcgcagatcttctggaatattgcttgtggctcatctcgg
aaggagatcactgaacactgggagtggctcgagacaaacctactccagactctgtccatc
tttgacaacgatgatgacatcaccaccttcgtcaagggcaaaatacagggcatcattgct
gaagagaataaaagtggcaaacctcaggaagacgaggatcccgggaagttccgtgaagcc
gagctgaagatgcggaagttgttcggaatgccggaggaagagaagctggtcaactattac
ccctgcagctactggaagggcagagtcccacggcagggttggatctacctgtctgtaaat
cacctctgcttctactccttcctgctgggaaaagaagtttcgctggtggtgcagtggacg
gatgtcacgcagttggacaagaacgccacgctggttttccccgagagcatccgcgtgagc
acgcgcgacaccgagcactttttctccatgttcctcaacatcaacgagacctttaaactg
atggagcagctggccaacatcgccatgagacagctgctggacaatgagagcttctccgcc
gaccgctcgctccccaaaccctgcaagaccctgaaaaatgtctctgcgctcaagagggac
ttggacgcacgtgcaaagaacgagcggtacagagcgctgttccggctcacacaggacgag
cgtttagatggacacaccgactgtacgctctggacgccgttcgctaagatgcatgtcgta
ggtcagatgtttgtttctaataactacatctgctttgccagtcgagaggaagatctgtgt
caacttatcattccactgagagaggtgactatagtggaaaaagcggacagcagtagtgtt
ttgccgagtccactgtcgatcagcactaaaaacaagatgaccttcctgtttgccaacctc
aaagaccgtgacttcctggtacagcgcatctctgacttcctgcagcgcacgcctgacaag
ccatgtggcctaaacactcaatccgagaatcccagtccaagtacgcctccctctctgccc
ccgtcccctcctgtcctggggtttggagagatgccccaaaaccaacactacagccccagt
ctgcccactgccaagaagggcctactgcaaatctaccagcaggatgtcccggaggagctg
gggcctaaagtgacgagagagaagatgaaagaggaatcatggaacatacatttctttgag
tttggccgtggagtttgtatgtaccgcacgtctaagaccagagagctggttctgaatggg
ataccagaaagtttgagaggagaactgtggctgctgttctcaggtgctcaaaatgagatg
tccacacacccaggttactatgccagtttggttgagcaggcaatgggtaaatgtactcta
gcgacagaggagatcgagagagacctgcaccgctccatgcctgaacatcacgccttccag
aacgagatgggcatcgctgctctgagacgtgtcctgacagcctacgcttacagaaacccc
agcatcggatactgccaggcgatgaacattgttacgtccgtgttgttgttgtattgtact
gaagaggaggcgttctggctgcttgtggcgctgtgtgaacggatgctgcctgactattac
aacactagagttgtaggagcgctggtggatcagggtgtgtttgaggagctcacccgtgag
tgtttgccgctgttgtacgagcacatgcaggatttgggcgtcatctccaccatctctctg
tcctggtttctcacactcttcttgtccgtcatgcctttcgacagcgcggtgctgctggtc
gactgcttcttctacgagggcattaaagtcattttccaggtggcattagctgtgctacat
gcaaacatggatcaactgctgtcctgttcagatgagggagaggccatgactattctgggc
agatatttggataatgttgtaaataagcagaccgtttctccacccattccccaccttcat
gccctgttgaccagtggcaacaatcctccacctgagattgacgtcttcgaactcattaaa
gcatcctatgagaagtttggtagcctgcgtgccgatgtcatcgaacaaatgaggttcaaa
caaaggttaaaggtcatacagtcactagaagacacagccaagagaagtgtggtgagagcg
atcatgacggagtctgcattcactattgaggagttggaagaattgtatgttctttttaag
gccaagcacatcatgagttgttactggggtgcgagcagcaccgctgcagagcggcacgac
ccaagtctgccgtatttggagcagtaccgcatcgactgcggccagttcattcagctcttc
tccgctctggcgccctggagctgcggccttcacaccaacaccctctccagccgactcttc
cgcctcctcgaccaaaacaaagactctcttatcaacttcaaagagtttgtcaccggactt
agtggaatgtatcatggcgatatgacagaaaaactcaaacttctctacaaactccacctg
cctcctgcgttgtgtcctgaagaggcagagtcagcgctggaggcaacgcagttcttcact
gacgatgacactccacaggatccccccttcctgtctcatctggacttcctggcacaggaa
gtgacctcaggtgaggagctgaaggaggcaggagacgcatcagctgccggagacacagat
gagaaaaaagaggagaagccgaaagactataagtactatctgagaatgtgggccaaagaa
aaagagccaaagaaagagagtatcaaagatctgcctcggatgaatcaggagcagttcata
gagatgtgtaagactctctacaacatgttcagtgaagatcccatggagcaggagttgtat
cacggcatcgccacggtggcgagtctcctgctgcgcatcggagaagtaggcaagaaattc
accaacaatggcggcaagaaaactgaaccccagctgccctcagcggtcgacgctctgcag
ccagagaaggaggactcatctggaggatcaggccaatccctggtctccaaggccctggcg
gaggcgcagctagaaacgccacctccaacagcggctggctcagacgaagaggccaaagac
gacacatccgtttcgtcctactccgtagtgagcgccgggtcgctgcagtgcgaggacatc
gcagacgacacggtgctgatcggctgcgtaggcggagacggagtggatcggaggcggggc
agtgcgccggatgccgattggtcgatcacgttcgagcaggttttagcatcgttcctaacg
gaaacatcactagtcgactactttgagaaaaaacacgacatccagagcaaaataacagcg
tgtaagtcactgagagcggtggaaagacagacaagtacgtcaagcgatcacgatttctct
ctgaacacactgacgcactcataa
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