KEGG   Labeo rohita (rohu): 127175935
Entry
127175935         CDS       T09007                                 
Symbol
kdm3b
Name
(RefSeq) lysine-specific demethylase 3B isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
lroh  Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lroh03036]
    127175935 (kdm3b)
Enzymes [BR:lroh01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     127175935 (kdm3b)
Chromosome and associated proteins [BR:lroh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    127175935 (kdm3b)
SSDB
Motif
Pfam: PWWP_KDM3B Tudor_KDM3B DUF7030 JmjC Cupin_2
Other DBs
NCBI-GeneID: 127175935
NCBI-ProteinID: XP_050983227
LinkDB
Position
14:27258864..27289293
AA seq 1780 aa
MGDSLGLIGKRLLLLLNDGGSAAAAAGGEMEQAAWLRGTVRAVSVIGLASPGVEVFVEFD
DSPWRQRSWVQVYGDEVRAVLMESAIVWANCSDPSLSATQWPALMFKPLVDRVGLGPLVP
VEFFGARSLTFLPNGSSLHTFETEKDFRHSLLQEQPALQAAISSWHSDSELQEILRKGSY
TIQGRRVQVYQPEFGEPWALGLVSQHDPVSHIMEITMDQVRVKGEETQVVDPRVIHVMLA
VEQLEESPDRRKKEGDGGKGEGSRRRRTASEGDEDVTLKRFKGAGEGVSDSQNGNGSNKD
AEAMVTCVEMPGEGVVEGRDGGGGVGGRVSSTCSPVALPSPDSSNNSNSSQQEHSHIRST
GFVKENGSFVPNQERISSSVSAVLPASTPTPPPLKPAPSPFSNTFPSLGQMPSLVPGAPA
PKSSPTLPAAEREEGGVLSGYPKTAALVSPGPVTISSPSQDNVSSVTLSAPVEANQKPSM
WGSTPEASQTPKTPTVAAAGFGKQSTEAVFGDVPTQANGSSQEDKPFGFPFGAAKESQRQ
DSDPSQNLFFQIMSQNQSITQGQSKAFTSLSECLNKEPPSLFKPAAPSEGFKKAVVASAS
AGLFGSAPASGLAPVKEQPKVPDIKPAGNGILLNKPFGAAVEAHGKLPTAFPSAIGQAAS
SAEALKPALGLGASGGIRNVNSSSPVSGFGLLAGNKVSETHQNLFLQATKETNPFFAYGG
AVSHSSFSALSTPKSSSALSASAVSPSGSSSLLSQDPPGGDAKPNLFTMAEPPKGILAPQ
FPSPALATTPSFTSVAQDGQQTSKPNKEGSDVTPGTQGQGASVPLDQNKFNLEERSQSTK
RDSESSSNSDLSDLSEAEDNSGQNQKPGVPAAVEENKKTQAAAKSRPRSKPFKAGQSVLK
DQSKVRRLKQSGESFLQDGSCINVAPHLHKCRECRLERYRKSREDSDDDDPNVACRFFHF
RRLAFTKKGVLRVEGFLSPQQSDSMAMGLWLPSLAAKEGLDLDTSKYILANVGDQFCQLV
MSEKEAMMMVEPHQKVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLRKN
RPPEVDDSPEEEVFSWLKCAKGQPHEPQNLMPTQIIPGTALYSIGDMVHAARGKWGIKAN
CPCTSRHNKPLVRPSAPNGLSQSGAANSVGNGATSTSATARPNGEPAAGAVIKTEPVEET
GSADTTSGASGTNSSTSSPAPAPSPVKDGKGTSSALHWLADLATQKEPKESLRSMMGRDS
RAPFGLDAFGTLSKPSGSSPKLFNSLLLGAGPSQPKAEGTSLRDLLNSGPGKLPQGPAEG
GVPFPSVFSTAGQADKMKGGLPNFLDHIIASVVETKKAEGRRASGSAEGGESGTVPRREG
LMGLSVLDPHTSHSWLCDGRLLCLQDPSNSNNWKIFRECWKQGQPVLVSGIHRKLKENLW
KPESFSEEFGDQDVDLVNCRNCAIISDVKVRDFWDGFQVISKRLQGGDGQPMVLKLKDWP
PGEDFRDMMPTRFDDLMDNLPLPEYTKRDGRLNLASRLPNFFVRPDLGPKMYNAYGLIST
EDRKVGTTNLHLDVSDAVNVMVYVGVPEGDGDHENKADLAGFKEVMQTIEEGDVDDMTKR
RVYEAKEKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDQTLRRR
LYEEYGVQGWSIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFR
HLSTTHTNHEDKLQVKNIIYHAVKDAVGTLKAHEPKLGRS
NT seq 5343 nt   +upstreamnt  +downstreamnt
atgggggactcgctcggtctgatcgggaagcggctgctgctgctgctcaatgacgggggc
tccgcggcggcagcggcgggcggtgagatggagcaggcggcctggctccgcggaaccgtt
cgggcggtcagtgtgatcgggctggcgagcccgggggtggaggtgtttgtagaatttgac
gacagcccgtggcggcagcgctcatgggtgcaggtgtacggggatgaggtgcgtgccgtt
ctcatggagagtgccatcgtatgggccaactgcagcgatccatcgctctctgctactcag
tggcctgccttgatgttcaagccgctggttgaccgtgtgggtttgggacccctggttcct
gtggagttcttcggtgcgagatctttgacgtttctccctaatgggagttcactgcacact
tttgagactgaaaaagattttagacactctttgctacaagagcagccagcacttcaagct
gccatcagcagctggcacagtgactctgagttgcaggagatcctgcggaaaggatcttac
actattcagggtcggagagtgcaggtgtaccaaccggagtttggtgagccctgggccctg
ggactcgtatctcagcatgatccagtttcacacattatggagattaccatggaccaggtc
cgtgtgaaaggtgaagagacacaagttgtcgaccctcgggttattcatgtaatgcttgct
gtggaacaattagaggagagcccagatcgacgcaagaaggagggtgatggtgggaaaggc
gagggcagtcggcggcgccggacggcatctgagggagatgaagacgttactctgaaacgt
ttcaaaggagctggggagggcgtttctgacagccagaatgggaatggctccaacaaggac
gctgaggctatggtaacatgcgtagagatgccgggagagggagtagtggagggaagagac
ggagggggtggcgtaggtgggagggtgtcgagcacctgtagtccagtagctttgccaagt
ccagactcctctaacaacagcaattcctctcagcaggagcactcccacataaggagcaca
ggttttgtcaaggagaacggcagttttgtcccaaaccaagaaaggatatcatcttcagta
tcagcggtgcttcctgcgtccactccaacaccacctccattgaagcctgccccgtcgccc
ttttctaacacttttccttctttgggtcaaatgcccagcttggtgcccggggcccctgcc
cctaaatcgtctcccacactcccagcggccgagagggaagagggaggtgtgctttcaggg
tatcctaaaacagctgccctggtgtctccaggtcctgtgaccatttcatcaccttcccaa
gataatgtttcaagtgtgaccctctctgcacctgtagaagcaaaccaaaagcccagtatg
tggggatcaactccagaagcaagccagacccccaagacccccactgtagctgctgcagga
tttggtaaacagtcaactgaggcagtgtttggggatgttcccacacaggccaatggttct
tcccaggaggacaagccttttggctttccttttggagctgcgaaggagtcgcagaggcag
gactctgatccctcacagaacctgttcttccaaatcatgtctcagaaccagagtatcacg
caaggccagtcaaaggccttcacgtccttgtccgagtgcctgaacaaggagccgcccagc
ctgttcaagcctgccgctccctccgagggcttcaaaaaggcagttgtggcttctgcatcc
gctggactgtttggttcagcacctgctagtggcctggcaccagtgaaagagcagccaaaa
gtgcctgatatcaagcctgcaggcaatgggatccttttgaacaagcctttcggagcagca
gtggaggcgcacggcaaactcccaaccgcttttccctcagccataggtcaagctgcgagc
tctgcagaggctctgaaacctgctttgggattaggtgccagcggtgggattagaaatgtt
aacagctcgagcccagtcagcggttttgggctgcttgctggcaacaaggtttcagaaact
caccagaaccttttcctccaggccacgaaggagacaaatccattttttgcttacggcgga
gctgtttcgcacagctcttttagtgcgttgtcaactccaaagtcgtcatctgcgctgtcc
gcgtctgctgtttcaccttcaggcagctccagtctgcttagtcaagatcctcctggtggt
gatgccaaaccaaatctgttcaccatggcagaacctcctaagggaatcttggccccccag
ttcccttctcctgctctcgcgaccactccatcattcacttcggttgcccaggatggacaa
cagacgtccaaaccaaacaaagaaggttcagatgtcaccccgggaacccaaggccaaggt
gcctctgtgcccttagaccaaaacaagtttaacttggaggaacgcagtcagtccaccaaa
agagattcagagtctagtagcaacagtgacctgtctgatttgagtgaggctgaggacaac
tcaggccagaaccagaaacctggggttcccgcagccgttgaggagaacaagaagacccag
gctgcggctaagagccggccgcggagcaaacccttcaaagcgggacagtccgtgttgaag
gaccagagtaaggttcggcgcttgaagcagtccggagagtcttttctgcaagacggctct
tgcattaatgtggcgccccacctgcacaagtgccgcgagtgccgtttggagcgctacagg
aaatcccgtgaggactcagacgatgacgatccaaacgtggcctgccgattcttccatttc
cgcaggctggctttcactaagaagggagtccttcgtgtggaaggttttctgagcccgcag
cagagtgacagcatggcgatggggctgtggctcccctctctcgcggcaaaggaaggactt
gacttggatacgtccaaatatattttagcaaacgtgggtgaccagttttgccaactggtc
atgtcagagaaagaggccatgatgatggtagagccccatcaaaaagtggcatggaagcga
gctgtgagaggagtgagagaaatgtgcgacgtgtgtgaaacaacgctgttcaacatccac
tgggtgtgtcgcaaatgcggcttcggcgtttgtctcgactgctaccggctacgcaagaac
aggccacctgaagtagacgacagtcctgaagaagaggtgttctcatggctaaaatgtgct
aaaggtcagccacacgaaccacagaacctcatgcccactcaaattatacccggcacagcc
ttgtacagcataggtgacatggtacacgcagccagaggtaaatgggggatcaaagcaaac
tgcccctgcactagtcggcataacaaacccttggtgcggcccagtgctccaaatggcctt
tcacagtcgggtgcagctaacagtgtgggaaatggagccacttccacttcagccacagcc
cgtccaaatggtgaacctgcagcgggtgcagtaatcaaaacagagcctgttgaagagacg
ggcagtgctgacacaacgtcaggcgccagtgggacaaacagcagcacttctagccctgct
cctgccccgtcaccagtgaaagatggcaagggcacttcctcagcccttcactggctggct
gacctggccacgcaaaaggagcccaaagagtctctgcgctccatgatgggtcgtgactca
cgtgctccgtttggtctggatgcctttggcaccctttccaaaccctcagggtctagtccc
aagctcttcaacagtctgctgctgggcgctggcccttcccaacccaaagcagagggcact
agcctccgagatctgctgaactctggtcctgggaagctcccgcaaggtcctgccgaggga
ggtgttcctttcccttcggtgttctccactgctggtcaggctgataaaatgaagggaggt
cttcctaacttcctggatcatatcattgcatcagtggtagagacgaagaaggcagagggt
cgacgcgcgtcggggtcagcagaaggcggcgaatcgggtactgttcctcgcagagagggc
ttgatgggtctcagtgtattagacccccatacatcccactcctggctgtgtgacggccgt
ttgctctgcctgcaggaccccagcaacagcaacaactggaaaatcttcagagagtgctgg
aaacaaggacagcctgtgctggtctcaggcattcacaggaagctgaaggaaaacttatgg
aagccggagtccttcagcgaggagtttggagaccaggatgtggacctggtcaactgtagg
aactgcgccatcatctctgatgtcaaagtccgagacttctgggatggcttccaggtcatt
tccaagcgcttgcagggtggagatggccaacctatggtactaaaacttaaagactggcct
cctggagaagattttagagacatgatgcccactcggtttgatgatctcatggataacctt
cctctgccagagtacacaaagagagatggccgtctcaacttggcctctcgtcttccaaac
ttctttgttcggccagatctgggtcctaaaatgtacaatgcctacggtctgatctccaca
gaagacaggaaggttggcaccactaacctgcatctggacgtatccgatgcagtcaacgta
atggtatatgtgggcgtcccagaaggagacggtgaccatgaaaataaagcagacctcgct
ggattcaaagaggtgatgcagaccattgaagagggagatgtggatgacatgactaagaga
agagtctatgaggcaaaggagaaacctggagcgctctggcacatctacgccgccaaagac
gcagagaagatccgcgagctcctgcgaaaggttggagaggaacaaggtcaggagaaccca
ccagaccatgatccaatccatgaccagagctggtacctggatcagacgctgcgtcgcagg
ctgtacgaggagtatggagtccagggctggtccatagtgcagtttttgggagatgccgtg
ttcatcccagctggagcgccacatcaggtgcacaacctgtacagctgtatcaaggtcgcg
gaggactttgtttctcccgagcatgtgaagcactgttttagactgacgcaggagttccgc
cacctttccaccactcacactaaccatgaagacaagcttcaggtgaagaacatcatctac
catgcagtgaaggatgctgtgggaacactaaaagcccatgagcctaagctaggccgctct
tag

DBGET integrated database retrieval system