Labeo rohita (rohu): 127175956
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Entry
127175956 CDS
T09007
Symbol
acsl1b
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1b isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00061
Fatty acid biosynthesis
lroh00071
Fatty acid degradation
lroh01100
Metabolic pathways
lroh01212
Fatty acid metabolism
lroh03320
PPAR signaling pathway
lroh04146
Peroxisome
lroh04216
Ferroptosis
lroh04920
Adipocytokine signaling pathway
Module
lroh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
127175956 (acsl1b)
00071 Fatty acid degradation
127175956 (acsl1b)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127175956 (acsl1b)
09143 Cell growth and death
04216 Ferroptosis
127175956 (acsl1b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
127175956 (acsl1b)
03320 PPAR signaling pathway
127175956 (acsl1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lroh01004
]
127175956 (acsl1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127175956 (acsl1b)
Enzymes [BR:
lroh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
127175956 (acsl1b)
Lipid biosynthesis proteins [BR:
lroh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
127175956 (acsl1b)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of breast milk
127175956 (acsl1b)
Exosomal proteins of breast cancer cells
127175956 (acsl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
127175956
NCBI-ProteinID:
XP_050983265
LinkDB
All DBs
Position
14:complement(24403502..24429280)
Genome browser
AA seq
732 aa
AA seq
DB search
MQAHELLKQLRIPELSEVRDYFRSLSTNTLLGMGAFTAVTAYWFATRPKAIKPPCDLHMQ
SVELPVRQRYVKMNSKQSKILYKTFLSVIDLYKTSLYVNQGGEFARRGAVLNGGPLLTYF
YEDAKTLYECFQRGLRESKNGPCLGSRKPKQPYEWLSYSEVIERAENLGSALLHKGHSKD
RDPYIGIFSQNRPQWTIAELACYTYSLISVPLYDTLGTEAMTYILDKTCISTVVCDIPEK
AKLLLDCVSGRQHTIKNLILIENFDADLVSKAQQCGIEIISLKDAENIGKAHRQRPVPPQ
PDDLAIICFTSGTTGDPKGAMLTHKNIVSNISAFVYVTRPSCPIGPQDAHISYLPLAHMF
ERVVQGVTLMHGARIGYFQGDIRILMDDLTTLKPTIFPVVPRLLNRMFDKIFGQANSPLK
RRILEFAFKRKENEMKSGIMRRDSVWDKIIFKKVQASVGGCVRLMITGAAPISAPVLTFL
RAALGCQFYEGYGQTECTAGSTTTLPGDWTAGHVGAPLPCNDIKLVDVAEMNYFAAKGEG
EVCVKGPNVFKGYLKDAEKTKEALDEGGWVHTGDIGKWLPNGTLKIVDRKKHIFKLAQGE
YIAPEKIENIYIRSEAVAQAFVHGDSLQACLVAIIVPDPDFLPGWAKKRGMGGSYEELCK
NKEVKKAILEDIVRLGKESGLKSFEQVKDIALHTEMFSTQNGLLTPTLKAKRADLRNHFR
KQIDELYSNIKM
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcacacgagctgttgaagcagctgcgaatccctgagctctccgaggtgagggac
tatttccgcagcctctccacaaacaccctcctcggcatgggtgcgttcactgccgtcacg
gcgtactggttcgccaccagacccaaagccatcaaaccgccatgtgacctgcacatgcag
tcagtagagctgccggtaagacaacgctacgttaagatgaactcaaagcaatcaaagatt
ttatataaaacttttttgtcagttatagatttatataaaacttcactttatgtcaatcag
ggtggggaattcgctcgtcgaggagcagttttaaatgggggtccgctcttgacctatttc
tatgaggatgccaagaccttgtacgagtgctttcagaggggtctgagggagtcaaaaaat
ggtccctgtctgggatccagaaaaccaaagcagccgtatgaatggctttcgtattcagag
gtgattgagcgagcagagaatttgggatcagcattattgcacaaaggacactcgaaggat
agagacccctacatcggcatcttctctcagaacagaccacagtggacgattgcagagctg
gcctgttacacatactctctcatatcagttcctctttatgacaccttgggcacagaggca
atgacctacatcctcgacaaaacctgtatctctacagttgtatgtgacatacctgagaag
gccaagctgctgttggactgtgtttcgggcagacagcacaccatcaaaaacctgatcctc
atcgaaaactttgacgctgatttggtcagcaaagcacagcagtgtggcatcgaaatcatc
agcctgaaagacgcagagaatatcggcaaggctcatcgacagcgtcctgtgcccccacag
cctgatgacttggctattatttgttttacaagtggaaccacaggagatcctaaaggagcg
atgctcacgcacaagaacatagtgtctaatatttctgccttcgtctatgtcacaaggcct
tcttgccccatcggtcctcaggacgcacacatctcctacctgcccctggcacacatgttt
gagagagttgtacagggtgtgactctgatgcacggagcacgaatcggatactttcagggt
gacattcgaattcttatggatgacctcacgacactgaagcccaccatattccctgtggtt
cctcgtctgctcaaccgcatgtttgacaagatcttcggacaggccaacagtcctctgaag
agacgcatcctggagtttgccttcaagaggaaagagaacgagatgaagagtgggatcatg
aggagagacagtgtgtgggacaagatcatcttcaagaaagtccaggccagcgttggagga
tgcgttcgattgatgataactggagcggcacccatttcagctcctgttctcaccttcctg
cgagccgcgctgggctgccagttttatgaaggatacggtcagaccgaatgcactgccggc
agcacaactacactcccaggagactggactgctggtcacgttggagctcctctgccatgt
aatgacattaaactagtggatgtggcagagatgaactattttgctgctaaaggcgaggga
gaggtttgtgtgaagggtcctaatgtttttaaggggtatctgaaagacgctgagaagacg
aaggaggctcttgatgaaggtggttgggttcacacaggagacatcggcaagtggttgccg
aatgggactctaaagatcgtggaccgtaagaagcacattttcaagctggctcagggtgaa
tacatcgctccggagaagatcgagaacatttacatcaggagtgaagctgtggcacaggct
ttcgtacatggagacagtctgcaggcctgtctagtagctatcattgtacctgatccagac
tttctgcctggctgggccaagaagagaggcatggggggctcatatgaagaactgtgcaaa
aataaggaggtaaagaaagccattctggaggacattgtcagattgggcaaagaaagtggc
ctgaagtcttttgaacaggtgaaggacattgctcttcacaccgagatgttctccacccaa
aacggcctcctgacgcccaccctgaaagccaaacgcgctgatctcaggaaccacttcagg
aaacagattgacgagctttactccaacatcaaaatgtag
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