Labeo rohita (rohu): 127175970
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Entry
127175970 CDS
T09007
Symbol
si:ch73-233f7.1
Name
(RefSeq) protocadherin beta-15
KO
K16499
protocadherin delta 2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127175970 (si:ch73-233f7.1)
Cell adhesion molecules [BR:
lroh04515
]
Cadherins
Protocadherins
127175970 (si:ch73-233f7.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
127175970
NCBI-ProteinID:
XP_050983293
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All DBs
Position
14:complement(25928052..25936120)
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AA seq
1014 aa
AA seq
DB search
MKMDRRLPRRRWTLAGQVVCLLLCACALDRVLAQIRYSVPEELEHGAFVGNIAEDLGLDV
AKLSSRRFRIVSGARKQYLEVNLENGILFVNEKIDREELCEQSPVCFLHLQVVIESPLEL
YRVEVEILDVNDNAPSFPWSEFNLEITESAAPGSRFPLESAQDLDVGSNSLRSYLLSANQ
HFVLDIQTRNDGSKFAELVLQSPLDREQQKTHEMVLTAVDGGSPLRSGTAQITVTVLDAN
DNVPVFDRSVYRVSLVENAPRGTLVLKLNATDLDEGANGEITYSFSGHAPLKVRELFSVD
SHSGEIRVKGIVDYERASVYELYVQAKDKGPSAVAVHCKVLVDILDVNDNAPEVILTSVS
TPVQEDAPPGTVIAVISVMDRDSGENGAVDCQIPGNVPFQLHSSFKNYYTLVTSEFLDRE
SVSEYNITLTARDLGSPPLSTRKTILVQVSDINDNPPRFIQPSYTVYVTENNAPGASICS
VTAFDPDSNQNAYLSYSILEGQIQGMPVSTYVSINSDNGNIYALRSFDYEQLRNFQIRVQ
AQDAGFPPLSSNVTVNVFVLDQNDNAPVILSPLPRNGTVATEMVPRSVDAGYLVAKITAL
DADAGQNSRLSYQMLQATDPGLFSVALYTGEIRTIRRFVDKDAIRQRLVILVKDNGQPPL
SATVSIILSVVDSVPESLSDFGDLSLSPQPPSNLALYLIVSLSTVSLIFLVAIIVLAAVK
CYKDRDSLGGYALSSLGAACCSFEPEPPAEVFKKSNLNLQISTGAKVPTNCVEVNSNPGN
LSQAYCYKVCLTPESAKSDFMFLKPCSPGTPRNNAARGADNLALSSQSRCSSVNNGATTP
NELKQANTDWALTKNQTSSLKSCNSINMDGTLMRKAMQAEPENYTGQMAAGQYWTWGTRS
REYRMHSPAGSVSQRAWTPHYTPQHNPTHHLQQQQQQQPTAQVHPHPPPDYQHNVYIPGT
PSGFCTLRPSYRSELDVHNSFSTFGKKRRFISPSSYDPHDDTGAEVINNDLYNE
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggaccggaggcttccgaggaggcgatggacgttggcagggcaggttgtgtgt
ctgctgctgtgtgcgtgcgcactggaccgggttttggcgcagattcgctattcagttccc
gaggagttggagcacggggctttcgttggaaatatcgcagaggacttgggcttggatgtg
gccaaattgtcttcacggagattccggattgtttccggggctagaaaacaatatttagaa
gtgaatttggagaatggaattctgtttgtgaacgagaagatcgaccgtgaggagctatgt
gaacaaagtcccgtttgtttcttgcacttgcaggtggtcattgagagtcctttggaactg
taccgggtagaagtggagattttggacgtgaatgataacgcacctagtttcccgtggagc
gagtttaatctggagatcacagagtctgctgcgcctggctcccggttcccgctggagagc
gcgcaggatctggatgtgggctcgaactctctccgctcatacttgctgagcgccaatcaa
cacttcgtgctggacattcagacgcgtaacgacggcagcaagtttgcagaactcgttctg
cagtcgccgctggaccgagagcagcagaagacgcacgagatggtgctcacggctgtagac
ggtggctcaccgttgcgctcgggcacggctcagatcaccgtaactgtgctggacgcgaat
gacaacgtgccggtgttcgaccgctccgtataccgggtcagcttggtggagaacgcgcct
agaggcacgctcgtgctcaaactgaacgccacggacctggatgaaggcgcaaacggcgag
atcacctattcgttcagcgggcacgcgcctctaaaggtgcgcgagctgttcagcgtggat
tctcactcgggtgagatccgggtgaagggaatcgtggactacgagagggccagcgtgtac
gagctctacgtccaggcgaaagacaagggtccctcagccgtggccgtgcattgtaaagtg
ctggtcgatattctagacgtgaacgacaatgcgcccgaggtcatattaacctctgtgtca
acacctgttcaggaggacgcgcctccgggcacggtgatagccgtgatcagtgtaatggac
cgcgactccggagagaacggggctgtggattgccagatccccggaaatgtgccgttccag
ctgcactcctcttttaaaaactattacacactcgtgaccagcgagtttctcgacagagag
tctgtctcggagtacaacatcacccttacggcgcgagatctgggctcgcctccgctgtcc
accaggaagacaattctggttcaagtgtctgacattaacgacaacccgccgcgcttcatt
cagccctcgtatactgtatatgtgaccgagaataacgccccgggcgcttccatttgctcg
gtgaccgcattcgatccggactctaatcagaacgcctatttatcctactccatcctggag
ggtcagatccagggcatgccggtgtccacttacgtctcaatcaattctgataacggcaac
atctatgcgctgcgctctttcgattacgagcagctccggaactttcagatccgcgtccag
gcgcaggacgccggtttcccgccgctcagcagcaacgtgaccgtaaatgtgttcgttttg
gatcagaatgacaacgcaccggtcatcctgtccccactacccagaaacggcactgttgct
actgaaatggtgcccaggtcggtggacgctgggtaccttgtggctaaaatcacggcgctt
gacgcggatgcggggcaaaactctcgcctgtcatatcagatgctgcaggcgacagatccc
gggcttttcagcgtggctttatacaccggggagatcaggacgatccgccgctttgtagac
aaagatgccatcaggcaaagactcgtcatacttgtcaaggacaacgggcagccgccgctc
tcggccaccgtgtccatcattctctcggttgtggacagcgtgccggagtctctgtccgac
ttcggtgacctctcgctcagcccccagcccccgtctaacctcgcgctctatttaatcgtg
tcactgagcaccgtctcgctcatcttcctcgtggccatcatcgtcctggcggccgtgaaa
tgctacaaagaccgcgactccctcggcggttacgcgctctcctcactcggtgccgcttgc
tgcagctttgaaccggaaccgcccgccgaggtgttcaaaaagtctaatctcaacctgcag
atctccaccggcgccaaagtgcccacgaactgcgtggaggtaaacagcaatcctggaaat
ctctctcaagcttactgctacaaagtgtgtttgacgcccgaatctgcaaagagcgacttt
atgtttctcaagccttgcagtcccggcacaccgagaaataacgcggcgagaggagcggat
aacctggcgctgagctcacagagccgctgctcgtccgtgaacaacggagcgactacgccg
aacgagttgaaacaagcaaacactgactgggccctcaccaaaaatcaaacctcctctctg
aaaagttgtaactctataaacatggatggcactctgatgcgtaaggccatgcaggccgaa
ccagagaattatacgggtcaaatggctgccggacagtactggacctggggaacccgctca
agagagtaccggatgcattctccagcaggtagtgtttctcaaagggcctggactcctcac
tacacgccccaacacaaccccacccaccacctgcaacaacagcagcagcagcagcccacg
gcacaggttcacccgcaccctccgccggattaccagcacaacgtctacatcccaggcact
ccgtctggcttctgcaccctgcgacccagttaccgcagtgagctcgacgtccacaactca
ttctccaccttcggcaagaaacgtaggttcatctctcccagcagctacgatccacatgat
gacacgggggcggaggtcatcaacaatgacttgtataatgaataa
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