KEGG   Labeo rohita (rohu): 127176020
Entry
127176020         CDS       T09007                                 
Symbol
stx5a
Name
(RefSeq) syntaxin-5a
  KO
K08490  syntaxin 5
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    127176020 (stx5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lroh04131]
    127176020 (stx5a)
Membrane trafficking [BR:lroh04131]
 SNARE
  Syntaxin (Qa)
   Stx-cisGolgi
    127176020 (stx5a)
SSDB
Motif
Pfam: SNARE Syntaxin-5_N Apolipoprotein Use1 BOS1_GOSR2_MEM11-like_N HrpB7 DUF16 UPF0242 MCPsignal ABC-2_memb_rel DUF2207_C DUF6746 phi29_gp9_C DUF7260 NTF3_N
Other DBs
NCBI-GeneID: 127176020
NCBI-ProteinID: XP_050983391
LinkDB
Position
14:21959259..21973486
AA seq 302 aa
MTCRDRTLEFQSACKSLQGRQLQNGTHTKPAINALKQRSDFTLMAKRIGKDLSNTFAKLE
KLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDLVRSRSGQNGRHIQTHSN
TIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREHFSQAPVSASPLLANNFNSSVLMQ
DESRSLGGEVAIDMDSRANPLQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHM
VKEQEETIQRIDANVEDTQLNVEMAHTEILKYFQSVSSNRWLMIKIFLVLIIFFIIFVVF
LA
NT seq 909 nt   +upstreamnt  +downstreamnt
atgacgtgtcgggaccgaacacttgagttccagtcggcgtgcaagtcactgcaggggaga
cagttacagaatgggactcacactaaacctgccattaatgctcttaaacagcgcagtgac
ttcactcttatggccaagagaattgggaaagacttgagcaacacatttgccaagcttgaa
aagcttacaattttggccaaaaggaagtctttgtttgatgataaagcagtggagattgag
gagctcacatacatcattaaacaggacatcaacagtctgaataagcagatagcgcagctg
caagatctcgtacgatcccgcagtgggcaaaatggccgccacatccagacacattccaac
actattgttgtctccctgcagtccaagctggcatcaatgtcaaatgatttcaagtcagtc
ttggaagtgagaacagagaatctgaagcagcagcgcagcagaagagaacatttctcccaa
gcccctgtctcagcctctcctctactcgccaataactttaatagttcagttctgatgcag
gatgagtctaggagtcttggaggtgaggtggccatcgacatggactctagagcaaatcct
ctccagctgcagctcatcgatgaacaggactcatatatccagagccgagcggataccatg
cagaacatcgagagcaccattgtggagctgggttccatctttcagcagttggcacacatg
gtcaaagagcaggaagagactattcagaggatcgacgccaatgtggaggacacccagctg
aacgtggaaatggcccacaccgagatactgaaatacttccagtctgtctcctccaatcgc
tggctgatgatcaagatattcctcgttctcatcatcttcttcatcatctttgtggtcttc
ctcgcctga

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