KEGG   Labeo rohita (rohu): 127176034
Entry
127176034         CDS       T09007                                 
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    127176034 (pcdh20)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lroh01009]
    127176034 (pcdh20)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lroh04515]
    127176034 (pcdh20)
Protein phosphatases and associated proteins [BR:lroh01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     127176034 (pcdh20)
Cell adhesion molecules [BR:lroh04515]
 Cadherins
  Protocadherins
   127176034 (pcdh20)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_pro DUF1180
Other DBs
NCBI-GeneID: 127176034
NCBI-ProteinID: XP_050983413
LinkDB
Position
14:complement(30193173..30199420)
AA seq 832 aa
MNWIILRLVLLLASAGQIHSRAALRFTTLEEQEAGVKIGSLSTTYSAPYQLLNERYIKVD
KSTGDLFTKERIDRETLCPSHQDGDCTFIDTAVVSLNSEIVKLIIVVDDINDNAPIFERN
EIPLHIPEDASIGTAFPLDDQAQDKDTGNNGLIHYHLKDSGGFFAIRQDGHELELVVLRE
LDRETQENHILVLVAVDGGSVPLSATANLSVTVTDVDDNCPEFDTDSPVTAIVPALGIKG
SAVAQLKATDKDLGQNAQITFSFSRQISDRAKALFHLDEHTGLISLAVDIQVDSPEEHML
KVLANSPLCPPVQTQVAIYIQPVTSPEPSIRIRFVTEHKNQVIVLQENEPPTVLALLELE
DTSAAKGTLSLDEDSMPFSLKPQAGSYLLSTSKPLDFEMCREYNVTLIISDPHGTRLHRR
EVIKVAVEDVNDNAPKFEQTHYEKDIKENNEPGEFLLKVQATDADSYQFGKVRYRLTNRG
PFRIHEETGVISVAESLDREQQETYILTVLAWDGGEPSQEGFATVSIHILDLNDNPPAFS
TPHFYFFVSESIPQLSQVGKVTVSDADKGGNGLIVDVRILSENVPFAMDLAQGSLRSTGE
VDREKQDRYDLLVVAVDGGSPALSTTVKMTIFIEDVNDNQPQVLLPSSNLSCLTISPATR
EGSMITKIYAIDEDSGMNSDITYQIIATKPALHSPFQIDQQSGNITLVQHLRGEDYGMHH
LFVVVRDGGKPDPLQTTVWINLLVNETLEKCHVNAVPDYLPPRLPPPMPVKDCRCESKAW
LIFYCGLCLMVISVCVLLAVVVVFIKCKKRKRKVEKKTVWETGNLCELKPLN
NT seq 2499 nt   +upstreamnt  +downstreamnt
atgaactggattatactacggttggtgcttctcttggcatctgctgggcaaatccatagc
cgtgctgcgctgcgtttcaccaccctggaggagcaagaagcaggtgtgaagatcggaagt
ctaagcacaacctactcagctccataccagctccttaatgaaagatacatcaaggtggac
aagagcacaggggatctgttcactaaagagcgcatagacagagagactttgtgtccatca
catcaggatggggactgtacttttatagatactgcagtcgtaagtcttaattctgaaata
gtgaaactgataatagttgtggatgatattaatgacaacgctcctatttttgagaggaat
gagattcctctacacatacctgaagatgcatcaatagggactgctttcccactggatgac
caagcgcaggataaggatacgggaaataatggcttgatacattaccatttaaaagactct
ggcggcttttttgccatcagacaagatgggcatgaacttgagctggtggtacttagggaa
ctggaccgggaaactcaggaaaaccacatcttggttcttgtagcagtagatggaggttca
gtaccacttagcgctacagctaatctcagtgtaactgtaactgatgttgatgacaactgc
ccagagtttgacaccgacagccccgtcacagccattgtgccagcattgggaatcaagggg
tctgcggtggcacagcttaaagccacagacaaagacctgggccaaaatgcccagatcaca
ttctccttcagccgtcagatctcagacagggccaaagcgctctttcacttggatgaacac
acaggcctgatcagtttagctgttgacatacaggttgacagtcctgaggagcacatgttg
aaagtccttgcgaatagcccactttgcccccctgtgcaaactcaggtagctatatacatt
cagccagtgacgagcccagagccatccataaggatcaggtttgtcactgagcataaaaac
caagtgatcgtgttacaagaaaacgaaccccccaccgtcttggccctcttggagctggaa
gacacctctgctgctaaaggtactctatccttagatgaagacagcatgccgttttctttg
aagccgcaagcaggcagctatttgctttcaacatcaaaacccctagattttgagatgtgc
agagagtataacgttacacttattatttctgatcctcatggcacacgcctacacagaagg
gaagtgatcaaagtggcggttgaagatgtgaatgataatgccccaaagtttgaacagaca
cactatgaaaaggacatcaaggagaacaacgagcccggagagtttctgctgaaagtccag
gctaccgacgcagacagctatcagtttggcaaagtaaggtacaggcttacaaacagagga
ccttttagaattcacgaagagacaggtgtgatatcggtagctgagtctttagatagagaa
cagcaggagacatacatcttgaccgttctggcctgggacggcggcgaaccgtctcaggag
ggctttgctactgtgtctatacacatactggatctgaatgacaatccaccagccttttca
accccacatttctatttttttgtgtctgagagcattccacaactttcccaagttgggaaa
gtcacagtaagcgatgctgataaaggaggcaatggcctgattgtggatgtgcgtatttta
agtgaaaatgtcccttttgccatggacctggcgcaaggatcactccgcagtactggtgaa
gtcgaccgtgagaagcaagaccgctacgacctgctggttgtagccgtagatggcggcagt
ccagccctttccaccacagtaaaaatgaccatttttattgaggacgtcaatgataatcaa
ccccaggtccttcttcctagcagcaacctctcctgtctgaccatatccccagctacccga
gaaggaagcatgataacaaagatttacgccatcgatgaggattcaggaatgaactcggac
atcacttaccaaataattgcaaccaaaccagctctccacagccccttccagattgaccag
cagtcaggaaacatcaccctagtccaacatcttcgcggcgaggactacggcatgcaccac
ctcttcgtagttgttcgcgacggaggaaagccagacccactgcagactaccgtgtggatc
aacctgctggtcaacgagactttggaaaaatgtcacgtgaatgccgttccggattacttg
ccaccacgactgcctcctccgatgcctgtcaaagactgcagatgcgaatcaaaggcctgg
cttattttttattgtggcctgtgtctgatggtcatctcagtctgtgttctcctggcggtt
gtagtggtgtttataaagtgcaaaaaaagaaaaaggaaagtggaaaaaaagactgtatgg
gaaactggaaatctctgtgaactgaaacctttaaactaa

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