Labeo rohita (rohu): 127176053
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Entry
127176053 CDS
T09007
Symbol
npas4a
Name
(RefSeq) neuronal PAS domain-containing protein 4A
KO
K26457
neuronal PAS domain-containing protein 4
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127176053 (npas4a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127176053 (npas4a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
HLH
Motif
Other DBs
NCBI-GeneID:
127176053
NCBI-ProteinID:
XP_050983438
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All DBs
Position
14:complement(7429107..7434991)
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AA seq
929 aa
AA seq
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MYRSTKGASKARRDQINAEIRNLKDLLPISDADKSRLSYLHIMSLACMYTRKSVFFSQDT
AGSAEETAGFLTFHELNELVQMMPGFLLLLTGEGKLLYLSDSVSEHLGHSMVDLVAQGDS
VYDIIDTADHFIMRSNLVPPTSPDTDRLFRCRFNTSKSVRRQSAGNKLVLIRARCLSQTP
NESSPGSYWTSNPVWVCFCTPLEPHTSRSGTAPDREPPSAPALESSFFLPCFRSQHSRDM
RLQEAQDSVNVYLGLNVETLRSQSWYSFLHPQDLSHASAQHCSLLREGGEGRSEMVVRVE
TADHSWVWLYMVLQLETGESPIVSNNYIISETEAWSVRQQLSSEQTQLSLVLGSSTSQPE
SLSLQSPETLSSPDQVFTPGSSGLSGQSFDFSTAACSAGSTEEQGGSSSMEPAQLESGPR
SSLSSLEEESFFQHEPSEPVASPSSASSPIPVTVATVSDLDFLTQNILLPPAFQIDPPLP
ALPLPLPPVPTSQAQQTKEFVCTPPYTPQLGGSNFPFGEPHFSFDPTGATTPPPLAPTAT
VTTTMAPSLSPSAPSNPQGSPPPPTTTLSTILPLTITSPTTEILFPVEPCSGSLYEKLPP
TPDSPGDGDCTVMTLPEVRGPLYVDVPHGPLPYPPEGLLTPEASPGKQPSLPFFSSLRER
EKERTEISLLAQHISTLVEGFYLDPLLTKLVPSTISERSQSPSLESAGLDSIPLLGDFYP
LKSWKGLDLPFFPDDDSLFEESVLETLLQDLTSSPPLSPTPSSSSHSSSPSSPSTPECWC
PPLHFDGVSAVSAGHFCSVQSAHCNNEAGRGAMMSPVNTGNMADGKAAGEVAMETEVASS
PLFAGIPTSPPLQLTASPASPVSSPISPASPGLPCAQSLFEELAALEPMFGAGASIAPGL
GQQPELYQLQSHAPQQCFRKDGSGSDPPF
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtatcggtccaccaaaggagcgtcgaaagctcgaagagaccagataaacgcggagatt
aggaacctgaaggacttgttgcccatctccgatgcggacaagtctcgtctctcctatctg
catatcatgtcactggcttgcatgtacacgagaaagtctgtcttcttcagtcaagataca
gctggcagtgctgaggaaactgcgggattcctcacgtttcatgaactgaatgaattggta
caaatgatgccaggttttcttctgctattgactggagaagggaagttactgtacctgtca
gacagcgtctctgagcacctcggacactcaatggtagatttggtcgctcaaggggacagt
gtgtacgacataatagacactgcagaccactttattatgaggagtaacttggtgcctcca
acctcacctgacacagatcgtctgttccgctgcagattcaacacctccaaatcagtgcgt
aggcagagtgcaggcaataagcttgttttaatccgtgcccgctgcctgtcacaaactcca
aacgagtcttccccaggatcctattggacgtccaacccagtgtgggtgtgtttctgtact
cctctggagcctcacacttcccgaagtggaactgccccggacagagaaccaccttcagct
ccagcactagaaagcagcttcttcctgccatgttttcgttctcagcacagccgtgacatg
agacttcaggaagcacaagacagtgtgaatgtatatttgggactaaatgtggagactctg
cggtcccaatcttggtacagcttcctgcatcctcaggatctttcacatgcctcagctcag
cactgcagcctattgagagagggaggagagggcaggtctgagatggtggttcgtgtagag
actgcagatcactcgtgggtctggctttacatggtcttgcagctggaaactggggaaagc
cctattgtcagtaacaattacatcatcagtgagacagaggcctggtcagtcaggcagcag
ctgagctctgaacaaacccagctctccttggtgctgggctcaagcacttcccaaccagaa
agcctaagcttacagagtccagaaacactctcaagccctgaccaagtgtttacaccagga
agcagtggcctctctggtcagtcattcgacttcagcacggccgcatgcagtgcgggatct
actgaggaacaaggtggcagctcgtcaatggagcctgcacaactggagagtggcccacgt
tccagtctctcctctttggaagaggagagcttcttccaacatgagccaagcgaacctgtg
gccagtccttcttctgcatcatctcccattccagtcacggttgcaacagtgtctgacttg
gacttcctcactcagaacattctgctgccaccagcattccagatagatcctcctctacca
gccttgccccttcctcttccacctgtgcctacctcccaggcccaacagaccaaggagttt
gtgtgcacacccccatacacacctcaactaggtggaagcaatttccccttcggggaacct
cattttagctttgatcctactggggctaccacaccacctcctcttgctccaactgcaaca
gtaacaacgacgatggctccatcactgtctccatctgcaccatcaaacccacaaggcagc
ccacctcctccgacgacaacactctcaactattctgcctctcactataacatctccaacc
acagagatcctcttcccagtggagccttgcagtgggtcgctctatgagaaactccctcct
actcctgacagtcctggtgatggcgactgcacggttatgactttaccagaagtccgtggt
ccgctgtatgtcgacgtcccccatggaccgctaccttacccaccagagggtctcctcaca
cctgaagcctcacctggaaaacaacccagtctacccttcttctcctcactacgtgagagg
gaaaaagagagaacggagatctcgcttttagcccaacacatcagcacactagtagagggc
ttctacctagatccactcctgaccaagctggttccttccaccatttctgaacgctctcag
tctccatctcttgaatctgcaggacttgattcaatcccactgttgggtgatttctacccg
ctcaagtcctggaaaggcctggacctgcccttcttcccggatgatgactctctgtttgag
gagagcgtcttggagacccttctgcaggacctgacgtcctcccctcccctttcaccgaca
ccctcttcctcctctcactccagctcgccctcctccccctccactcctgagtgctggtgc
ccacccttgcactttgacggggtctctgctgtgagtgccggtcacttctgtagcgtccaa
tcggcgcactgtaacaatgaggccgggcgaggggctatgatgtcgccagtcaacacaggc
aacatggcagatgggaaggcggcaggcgaagttgccatggagacagaggtagcatcatcg
cctctgttcgcgggcataccaacatctccaccactgcagctaactgcctcccccgcctcc
ccagtctcctcgcctatcagccccgcatcgcccggcctgccctgcgcccagtccctcttc
gaggagctggccgccctggaacccatgtttggggcaggtgcctcgatcgcccccggcctg
gggcaacaacctgagttgtatcaactccaaagtcatgcgccgcaacagtgcttccgcaaa
gatgggagtggaagtgatcctccgttctaa
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