Labeo rohita (rohu): 127176158
Help
Entry
127176158 CDS
T09007
Symbol
msx1a
Name
(RefSeq) homeobox protein MSX-1a
KO
K09341
homeobox protein MSX
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127176158 (msx1a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
127176158 (msx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
127176158
NCBI-ProteinID:
XP_050983619
LinkDB
All DBs
Position
14:complement(100514..102003)
Genome browser
AA seq
195 aa
AA seq
DB search
MSSDLICILFLVLRKFSAVLPGFQSHCEGACERRHHADFKSSARDESKGRFAVLLTLGRL
SPPACPLRKHKTNRKPRTPFSTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIW
FQNRRAKAKRLQEAELEKLKMATKPMLPPAFGISFPVGAHVPASYTGSHQFHRHSVSMTP
VGLYTHMGYSMYHLA
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagatcttatttgcattttgttcttagtgttgcgtaaatttagtgcagtatta
cctggatttcagtcgcactgtgagggtgcatgtgaacgcagacatcatgcagacttcaaa
agtagtgcacgagatgagtctaaaggtcgttttgctgttttgttgactttagggcgtctc
agtcctcccgcatgtcctctgagaaaacacaaaaccaaccgaaagcctcggaccccgttc
agcacgtcgcagctgctggcgctggagcggaagttccggcagaaacagtacctgtctatc
gccgaacgggccgagttctccagctcgctgaacttgacggagactcaggtgaagatctgg
ttccagaacaggcgagctaaagccaagcggctccaggaggccgagctcgaaaaactaaaa
atggccactaaaccgatgcttcctccagccttcgggatttcatttccagtcggcgctcac
gttccggcttcttatacgggatcgcaccagtttcacagacactccgtgagcatgacaccg
gtgggactgtacacacacatgggatacagcatgtaccatttagcgtaa
DBGET
integrated database retrieval system
