Labeo rohita (rohu): 127176172
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Entry
127176172 CDS
T09007
Symbol
csf1ra
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127176172 (csf1ra)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
127176172 (csf1ra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lroh01001
]
127176172 (csf1ra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lroh04090
]
127176172 (csf1ra)
Enzymes [BR:
lroh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
127176172 (csf1ra)
Protein kinases [BR:
lroh01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
127176172 (csf1ra)
CD molecules [BR:
lroh04090
]
Proteins
127176172 (csf1ra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
Ig_2
I-set
ig
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
C2-set_2
Anoctamin_N
Motif
Other DBs
NCBI-GeneID:
127176172
NCBI-ProteinID:
XP_050983643
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All DBs
Position
14:complement(26560083..26588814)
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AA seq
972 aa
AA seq
DB search
MFALLLVCGILLAQAQGWSEPRIRLSSGAPVGTDVILESSFPLHLICEGDGPVTWLIRLA
KHRRYISKEVGNIRSFRVEKATADFTGTYKCVYMNGNESSSVHVFVRDPRVLFVSPSTSL
RYVLKEGEDLTLPCLLTDPDATDFNFRMENGSAVPYGMDVTFDPKKGVLIRNVQPGFNAD
YVCSARIRGVEKMSKTFSINVMQRLRFPPYVFLKRSEYVRLVGEKFQISCTTNNPNFYYN
VTWTHSSRTLPKAEEKSTMEGDRLAIESVLIIPAVQLSDSGNITCTGQNEAGANSSTTQL
LVVDEPYIRLSPKLSSKLTHRGLSIEVREGDDVDLRVLIEAYPPLISHQWETPTSHNASL
PENRFYTHNDRYEALLFLKRLNSQETGRYTLHAKSSMRNASITFDIKMYTKPVATVRWEN
VTTLSCRSYGYPAPSILWYQCMGIRTTCPENSTGLQPIQTQTLAFDKEPYGSVGVESVLT
VGPSNQKMTVVCVAFNLVGQGSDTFAMDVTDQLFTSAMCGSTVAMVVLALLLIFMIYKYK
QKPRYEIRWKIIEATNGNNYTFIDPTQLPYNEKWEFPRDKLKLGKTLGAGAFGKVVEATA
YGLGKEDNVLRVAVKMLKASAHPDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLV
ITEYCCHGDLLNFLRSKAENFLNFVMTIPNPEMDYKNVNTERMFFRSDSGISSTCSDHYL
DMRPASSRPTNSALSSSPDCEEAEESWPLDMDDLLRFSYQVAQGLDFLAAKNCIHRDVAA
RNVLLTNSRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSY
GILLWEIFSLGKSPYTNMLVDSKFYKMIKCGYQMSRPDFAPPEMYTIMQMCWNLDAAERP
TFSKISQLIDRMLGDTTDQQETQYQNVESDGHGDQQLESCDPVKHEEESFETSCDQEEED
QPLMKPNNYQFC
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgctcctgctcgtctgtgggatcctgctcgctcaagctcagggttggtctgag
ccacggatcagactgagctctggagctccggttggcaccgatgtgattctcgaatctagt
tttcctcttcatttgatctgtgaaggtgacggtccggttacatggcttatccgactggcc
aaacatagacgttacatctccaaggaagttggaaacatccggagtttccgtgtggaaaaa
gcaacggcggattttacaggaacttacaagtgcgtctatatgaacggaaatgagtcatct
tcagttcatgtctttgtcagggatcctcgagttctcttcgtctcacccagtacgtctctg
cgttatgtgctgaaagaaggtgaagatctgacactaccgtgtcttttgactgaccccgat
gccacagactttaacttccgcatggagaacggctcagcggtgccttacggcatggacgtg
acctttgaccccaaaaagggcgtcctgattcgcaacgttcagcctggatttaatgccgac
tacgtttgcagcgctagaatcagaggggttgagaaaatgtcgaagacattctcgataaac
gtcatgcaacggttacgttttccaccgtacgtgtttctgaagagaagcgagtatgtcaga
ctggtgggagagaaatttcagatcagctgcaccacaaacaaccccaacttttactacaat
gtcacatggacacactcctctagaacgctgcccaaagcagaagagaaatcgacgatggaa
ggggatcgtttggccattgagagcgtcctgatcataccggctgtccagctgtctgattcg
ggtaacatcacctgtacgggtcagaacgaggccggagcaaacagctccactacacaactg
ctggtcgtagacgagccgtacattcgactctccccgaagctctcatctaaactcactcac
cgtggtctgtccatcgaggtgagggaaggcgacgatgtagatctcagggttttgatcgaa
gcgtatccaccgctcatctcacaccagtgggagactccgacatcccacaatgcctcactc
ccagagaacaggttttacacacataatgacaggtacgaggcgctgctgttcctgaagaga
ttgaactcccaggaaaccggtcgctacacactccacgccaaaagcagcatgagaaatgcc
tccattacttttgatattaaaatgtacacgaaacctgtagcgacggtgagatgggagaac
gtcaccactctgtcatgcaggtcttacggatatccggctcccagcatcctctggtaccag
tgcatgggaatcagaaccacctgtccagaaaactccacgggtcttcagcccatccagacg
cagacgcttgcattcgataaggagccgtacgggtcagtgggtgtggagagcgtcctgacg
gtgggaccgtccaaccagaagatgactgtggtgtgtgtggccttcaacctggtcggacaa
ggcagcgacaccttcgccatggatgtcactgatcagctcttcaccagcgctatgtgtgga
tctacagtggcgatggtggttttagcgctgttgctcatctttatgatctacaagtacaaa
cagaaacccagatatgagatccgctggaaaatcattgaagccacaaacggaaacaactac
accttcatagacccgacacaactgccatacaatgagaaatgggagtttcctcgagacaaa
ctaaagctcggaaaaactctgggagcaggagcctttgggaaggtggtggaggccacggcg
tacggcctgggcaaagaggacaatgtcttacgtgtagctgtcaaaatgctgaaagccagc
gcccatccagacgagcgagaggctctgatgtccgagctgaagatcctcagtcatctcggg
cagcacaagaacatcgtcaacctgctgggtgcctgtacacatggcggtcctgtgctggtg
atcacggaatactgttgtcatggtgatcttctgaacttcctgcgtagcaaagccgagaac
ttcctgaacttcgtcatgacgattccaaatccagaaatggattataagaacgtcaacact
gaacgaatgtttttcagaagtgacagtgggatttccagcacgtgttctgatcattatttg
gacatgagacctgcctcatccagacccacaaactcagctctgagctcttctccggactgt
gaggaggctgaagaatcgtggccgctggacatggacgacttactcagattctcctatcag
gtggcacagggactcgacttcctcgctgctaaaaattgcatccacagagatgtggcggcc
agaaacgtcctcctcaccaacagcagagtggccaagatctgtgatttcggtttggcgcga
gacatcatgaacgactccaactatgtagtcaaaggaaatgcacgtcttccagtaaagtgg
atggctccagagagtattttcgactgcgtttacacagttcagagtgatgtctggtcttac
gggatcctgctgtgggagattttctcattgggtaagagcccgtataccaacatgctggtg
gactccaagttttataaaatgatcaaatgtggctatcagatgtcccgacctgactttgca
cctccagaaatgtacaccatcatgcagatgtgctggaacctggacgctgcggagagacca
acgttcagtaagatcagtcagctgatcgataggatgctgggagacacaactgatcagcag
gagacacagtaccaaaatgtcgagtccgatgggcacggtgaccaacaactcgagtcgtgt
gaccccgtgaagcatgaagaggagtcatttgagacatcgtgtgaccaggaagaagaggat
cagccgctcatgaaacccaacaactaccagttctgctga
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