Labeo rohita (rohu): 127176189
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Entry
127176189 CDS
T09007
Symbol
lingo2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127176189 (lingo2)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
127176189 (lingo2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_14
V-set
LRR_9
LRRNT
LRR_Zer-1
LRR_RPS2
DUF7617
C2-set_3
C2-set_2
Ig_6
Motif
Other DBs
NCBI-GeneID:
127176189
NCBI-ProteinID:
XP_050983666
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All DBs
Position
14:15558788..15893656
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AA seq
626 aa
AA seq
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MKRRKKLSHDSMVDCLSRVMLHTAVSCWQPLLGLALVAVFVGSTLACPARCECSAQSRSV
ICHRKRYNAIPDGVPTETRILDLSKNRIPAVNPDDFLVYPHIEELDLSGNIIAYVEPGAF
NSLYSLHTLSLKSNRIKLLSLGVFSGLSNLTNLDISDNKVVILVDYMFQDLRNLRSLEVG
DNELVYISHRAFSGLLSLESLTLERCNLTVVPTDALSHLHNLVSLHMRYLSISTLHPYSF
KKLFHLRHLEIDNWPSLDVVPVHSLHGLNLTTLSITNTNLSAFPYQALRHLPYLTHLNLS
YSRIRTVEGGLLHDLVRLRELRLAGSQLVSIEPYAFQGIRWLRFLNVSHNRLDTLERGVF
HAPEALEVLMINDNPLVCDCRLMWLLQRRHSISFGDKQPECSTPEGIHGRPFKEFKETLL
SYYVTCTKPKIRENRTQMVSVEEGQSARLHCSAEGTPRPTISWVTPRRRHLTNRSHGRVT
VHNNGSLDIKAAEVQDDGVYMCVASNTAGNDTLMVSLAVKSLGSLYANRTQHYTDTSNAT
ANGTNLPNVTFGLDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYVP
RSKSNGTSAEEADQGAGPRRFNMKMI
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacggaaaaagctgagccatgacagtatggtggactgtttgagccgagtcatg
ctgcacacagccgtgtcttgctggcagcctttgctggggctggccttggtggccgtgttt
gtgggctccacattggcctgccccgcccgctgcgagtgctccgcccagagccgctctgtc
atctgccaccgcaagcgctacaacgcaatccctgatggagtcccaaccgagacacgaatc
cttgatctcagcaagaatcgtattccggccgtcaaccctgatgactttttagtctatcca
cacatagaagaactggatctgagtgggaacatcattgcctacgttgagcccggagccttc
aactcactctacagcctccacacgctgagcttaaagagcaatcgtatcaagctcctctct
ctaggcgtcttctccggcctgtccaacctgacgaacctggatatcagtgacaacaaagtt
gtcattcttgtggactatatgttccaggacctgcgcaacctcaggtcattagaagttgga
gacaatgagctggtttatatctcccatcgggcctttagtggattgttgtcactggagagc
ctgacactggagcgctgtaacttgacggtggtgcccaccgatgccctgtcccacctgcac
aacctggtgagcctacatatgcgctacctcagtatcagcactctacacccctactccttc
aagaagcttttccacctccgtcacctagagatcgacaactggccatcactggacgtggtc
cctgttcattctttgcatggcctcaaccttaccacgctttctattaccaacaccaacctg
tccgctttcccttaccaggctcttcgccacctgccttacctcacacaccttaacctctcc
tacagtcgtatccgaacagtggagggtggcctgcttcacgaccttgtgcgattgcgtgag
ctgaggttggctggatctcaactggtgtctattgaaccctacgctttccagggcatccgc
tggctccgtttcctaaatgtctcccacaaccgcctcgataccttggagaggggtgtattc
catgctcctgaggccctggaggtactgatgatcaacgacaatcctctggtgtgcgactgc
cggctcatgtggttgctgcaaaggcgccattccatttcttttggtgacaagcagcccgag
tgcagcactccggaaggaatccacggacgcccgttcaaggagttcaaagagaccctgcta
tcctactacgtgacctgcaccaagccgaagatccgagaaaatcggactcagatggtgtcc
gtggaggagggacagtcggcccgtttacactgcagtgcagaggggaccccgcggcccact
atttcctgggtcaccccacgccggagacacctgaccaacaggagccacggcagggtgaca
gtccacaacaacggctcgttggatatcaaggcggcggaggttcaggatgacggtgtgtat
atgtgtgtggcctcgaacacggcaggcaatgacactcttatggtatcactggcagtgaaa
agtctgggctcgctgtatgccaacaggacccagcattacacggatacaagcaatgccact
gccaatggtaccaacctccccaatgtgacctttggcctggacctaaagactatcttagtt
tctacagccatgggctgtttcacattcctaggagtggttctcttctgcttcctgctcctg
tttgtatggagtcggggaaaaggcaaacataaaaacaacattgatattgagtacgtgcca
cgctcaaagtccaacgggacctccgctgaggaggcggaccagggtgctgggccacgtcgc
tttaacatgaaaatgatttaa
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