Labeo rohita (rohu): 127176210
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Entry
127176210 CDS
T09007
Symbol
fmr1
Name
(RefSeq) synaptic functional regulator FMR1
KO
K15516
fragile X mental retardation protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127176210 (fmr1)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127176210 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
127176210 (fmr1)
mRNA cycle factors
Stress granule specific factors
127176210 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXMR_C2
Tudor_FRX1
KH_1
Agenet
KH_NusA_2nd
FXR_C3
DCD
Motif
Other DBs
NCBI-GeneID:
127176210
NCBI-ProteinID:
XP_050983714
LinkDB
All DBs
Position
14:complement(28216954..28230531)
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AA seq
569 aa
AA seq
DB search
MDELAVEVRGASGAFYKAFIKDVHESTVTVSFENNWQPERQIPFHDVRFPPPTGFQKEIN
ESDEVEVYSRANDKEPCGWWLAKVRMVKGEFYVIEYAACDATLNEIVTLERLRPVNPNKA
ASKNTFLKIRLDVPEDLRQMCAKDSAHKDFKKAIGAFNVTYDSEEKQLVILSVNEVTAKR
IAMLSDMHFRSLRTKLALILRNEEATRQLESSRQLASRFHEQFVVRDDLMGLAIGTHGAN
IQQARKIPGVTTIDLDEETCTFHIYGEDQEAVRKARSYLEFSEDVIKVPRNLVGKVIGKS
GKLIQEVVDKSGVVRVRVEPENDKKPSPLEEGMVPFVFVGTKESISNARILLDYHLNYLK
EVDQLRMERLQIDEQLRQIGGGPRALPGRPEKEKPFMADNGMGPSRGGGKPFGRGGRGRR
GPTLASGTNSEASNASETESDHRDELSDWSLAPTDEESMGYPKRAPDGRKRGGGPRGRGG
RGRGGYKTEDMHWNESRSRSSRDSKLRPQEDSLQIRIDSNNERSVHTSRGPQALAGDSGG
NRQRPIKDRGVKKDKQDGPDSQAVVNGVS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctcgcggtggaagtgcgaggagcgagtggagctttctacaaggcttttatt
aaagatgttcatgagagtacagtcacagtgtcttttgagaacaattggcagccagaacga
cagattcctttccatgatgttcggtttccacctccgaccggctttcagaaagagataaac
gagagtgatgaagtggaggtttactccagggccaacgataaagagccctgtggatggtgg
ctagccaaagtccgcatggtgaaaggagagttttatgtgatagaatacgcagcctgtgat
gcaacgctaaatgaaatcgtcacattagagaggctacgacctgtgaaccccaacaaagcc
gcgtcaaagaacacctttctcaaaatcagactagatgttcctgaagatttaagacagatg
tgtgcgaaagactctgcacataaagatttcaaaaaagcgatcggagcgtttaacgtcact
tatgactcggaagaaaagcagttggttattttgtctgttaatgaggttacagcaaagcga
atagccatgttgagcgacatgcacttcaggagtctgcgcacaaagctggcgctgatactg
aggaatgaggaagcaacccgacagctggagagttctcggcaactggcttcaaggttccat
gagcagtttgtggtgcgagatgacctcatgggattggctataggcacccatggggcgaat
atccagcaggccagaaagattcctggggtcacaaccatagatctcgatgaggagacctgc
acgtttcacatctatggagaggaccaggaggctgtacggaaggccagaagctacctggaa
ttttctgaagatgttattaaagttcctaggaatttagtcggaaaagtcattggcaagagt
gggaagctgattcaagaggttgtggataaatcgggagttgtcagagttcgagtggaaccg
gaaaatgacaaaaagccttctccattagaggagggaatggtgccatttgtgtttgtgggg
acgaaggaaagcatttcaaatgcacgaattctgctggactaccatctgaattatctaaag
gaggtagatcagctgcgaatggagcgactgcagattgatgaacagctcagacagatcggt
ggcgggcctagagctctgccgggacgacctgagaaagaaaaacctttcatggctgataat
ggaatgggaccctctcggggtggcggcaaacccttcggtcgtggagggagagggagacgg
ggcccgacactggcttcaggcaccaactccgaggcctctaatgcatctgagaccgaatct
gaccacagagatgagctcagtgactggtccctggcccctacagatgaggagtccatgggt
taccccaaaagggcccctgatggacgcaaaaggggtggagggccccggggtcgtggaggg
agaggaagaggaggatacaaaactgaagacatgcactggaatgagtcccgctcccgtagt
tccagagactcaaagctgagaccccaggaagactcactgcagatccgcatcgacagcaat
aacgagaggagcgtccacaccagccgaggcccacaagctctggcaggagacagcggaggg
aaccggcagagacccataaaggacagaggcgtgaagaaagacaagcaagacggcccagac
agccaagccgttgtgaacggcgtttcgtag
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