Labeo rohita (rohu): 127176301
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Entry
127176301 CDS
T09007
Symbol
msx2a
Name
(RefSeq) homeobox protein MSH-A
KO
K09341
homeobox protein MSX
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127176301 (msx2a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
127176301 (msx2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
127176301
NCBI-ProteinID:
XP_050983861
LinkDB
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Position
14:complement(3047708..3050468)
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AA seq
250 aa
AA seq
DB search
MSSDNYKGNASSDEEDDDQGSRSPPPERSVQTQSLPFSVEALMSKKGRSESTSQEPIHMP
CMINPDDRSVIYSESVDFPKRCESVKEDSSWINKPRLSPRPQSPAACTLRKHKTNRKPRT
PFTTTQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELER
LKMTSKPILHPGLTLPFPLCTQTQTAALLCGQSFPFSRHMLPFAPVGIYSTPVGYSVCPL
SKDGFSVEPV
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagataattataaaggtaacgcgtcttccgatgaagaagatgatgatcagggt
tcacggtcacctccaccggagcgttcagtccagacgcagagtctcccgttcagcgtcgaa
gcccttatgtcgaagaaaggacggagtgaatcaacttcacaagaaccgattcacatgcca
tgcatgataaatccggatgatcgatcggtgatatattccgagtcagtggatttccccaaa
cgctgtgaatctgtcaaagaggactcttcctggatcaacaaacccagattatcaccacga
ccgcagagtcccgcggcatgcactctccgaaagcacaagacgaaccgtaaaccccgaacc
cctttcaccacaactcagctcttggccctggagcggaagttccgtcagaagcaatacctg
tccatcgcagaacgtgccgaattttccagctctctcagcctgaccgagacccaggtgaag
atctggttccagaaccgaagagcgaaggccaagcggctgcaggaggccgagctggagagg
ctcaaaatgaccagcaaacccatcttacatcccggcctcactctgccgtttccactctgc
acgcaaacccagacggcagctctcttgtgcggacagtctttccccttcagcagacatatg
ctgccttttgcacctgtaggaatatactccacaccggtgggttacagcgtgtgtcctctc
tccaaagatggcttctctgtggagccagtctaa
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