Labeo rohita (rohu): 127176334
Help
Entry
127176334 CDS
T09007
Symbol
sox3
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127176334 (sox3)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127176334 (sox3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
PSMbeta
Motif
Other DBs
NCBI-GeneID:
127176334
NCBI-ProteinID:
XP_050983912
LinkDB
All DBs
Position
14:complement(8882536..8886772)
Genome browser
AA seq
300 aa
AA seq
DB search
MYNMMETEIKSPLPQSNTGSAAGGKNNSANDQDRVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGANAVNNAVSVGQRMDYTHMNGWTNSAYSLMQDQLAYPQHPSMNSPQIQQMH
RYDMAGLQYPMMSTAQTYMNAASTYSSMSPAYTQQTSSAMGLGSMASVCKTEPSSPPPAI
TSHSQRACLGDLRDMISMYLPPGGDSADHSSLQTSRLHSVHPHYQSAGTGVNGTLPLTHI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagattaaaagcccccttccgcagtccaacacgggctcg
gcggcgggcggcaaaaacaacagtgccaacgaccaggaccgggtgaagcggcctatgaat
gctttcatggtgtggtcccgcgggcagcggaggaagatggcacaagagaatcctaaaatg
cacaactctgagatcagcaagcgcctcggcgctgactggaaacttttgactgacgccgag
aagagacccttcattgatgaggccaagcggttacgagccatgcacatgaaggagcacccg
gattacaaataccgtccccgcaggaagaccaagaccctgctgaagaaagacaagtactcc
ttgcccggaggactcttggcacccggtgccaacgctgtcaacaacgccgtctcggtgggc
cagcggatggactacacgcacatgaacggctggacgaacagcgcgtactccctcatgcag
gaccagctggcctacccgcagcatcccagcatgaacagcccccagatccagcagatgcac
cggtacgacatggcgggacttcagtacccgatgatgtccacggcccagacctacatgaac
gccgcgtccacgtacagcagcatgtcaccagcatacacgcagcagacttccagcgcaatg
ggtttgggctccatggcttcggtgtgcaagacggaacccagctctcctcccccggccata
acctctcactctcagcgtgcttgtttgggagacctgagggatatgataagcatgtacctg
ccccccggaggagacagcgccgaccactccagcctacagaccagtcggttacacagcgtt
catccgcactatcagagcgcagggactggcgtgaacggaacgctacccctaacccacatt
tga
DBGET
integrated database retrieval system
