Labeo rohita (rohu): 127176345
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Entry
127176345 CDS
T09007
Symbol
pcdh10b
Name
(RefSeq) protocadherin-10b isoform X1
KO
K16499
protocadherin delta 2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127176345 (pcdh10b)
Cell adhesion molecules [BR:
lroh04515
]
Cadherins
Protocadherins
127176345 (pcdh10b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
127176345
NCBI-ProteinID:
XP_050983930
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All DBs
Position
14:complement(15100507..15114111)
Genome browser
AA seq
1028 aa
AA seq
DB search
MFEFLLLLCLADGVVSQIRYSVPEEAEHGTFVGNIAEDLGLDLTKLSSRRFQVVPSSRTP
YLEVNLENGVLFVNEKIDRERICKQSASCLLHLEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITNNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQAMHRYVLTAVDGGQPPRTGTALLVVRVLDSNDNVPVFDQPVYSVNLAE
NAPVGTLVIQLNATDSDEGPNGEVIYSFSNHISSRVKELFDIDARTGRIEVRGEVDFEES
SLYQIYVQAKDMGPNAVPAHCKVLVKVTDVNDNAPEIIFSTVTESVSENAATGTVIALLS
VTDKDSEDNGQTHVEILGDVPFKLKTSFRNYYTIVTDGPLNRETVEAYTVTVVARDKGIP
SLATSKSIKVHVSDENDNAPTFTQPIYDVYVTENNVPGAYIYAVSAVDPDVGQNAYITYS
IVECEIQGMSVVTYVSINSENGYLYALRSFDYEQLKDFSFVVQARDSGSPELWSNATVNV
IIVDQNDNAPSVIAPLGKNGTAREPLPRSAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSVKRDPQQLYELLIEVRDHGQPPMSCSALVQVTLVDSLVE
GHSGERGTAKAKDASLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNIYSTCLASD
CCCLVGCGSCGSGGCCGRQARAARKKKKLSKSDIMLVQSTNTANVSVASAAQVPVEESGS
FGSLHQSQNYCYQVCLTPESAKTDLMFLKACSPSRSNDTEHNPCGAIVTGYTDQQQPDII
SNGSLLSSETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDAMHR
GHSSGADLFSNCTEECKALGHSDRCWMPSFVPTEARQGADYRSNLHVPGMDSVPDSEVFE
GETLAGDQSFSTFGKETLHHPNQMHQHQHQHHQHHLNASTLERKEFDALLCNSRMPYKAA
CLSRKRIC
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagtttttgctcctgctgtgtctcgcggatggggtagtttcgcagatacgttac
tctgtgcccgaggaagcggagcatggcacgtttgtggggaatatcgcagaggatttggga
ctggaccttacaaaactttcatcccgccgctttcaggtggtgcccagctcgcggacgccg
tacctggaagtaaacttggagaacggggtgcttttcgtgaacgagaaaatcgaccgggag
cgcatctgtaagcagagcgccagctgtttgcttcacctggaggtgttcctggagaacccg
ctcgagctctttcgcgtggagatcgaggtggtggacatcaacgacaacccgccgagcttt
ccggagacagacatcaccgtggaaatatccgagagcgcgaccccgggtacgcgcttcccg
ttggagagcgcctttgatccggatgtcggtagtaacgcattgcgcacttacgacattacc
aacaacaactatttctacctagacgtgcaaacacagactgacggaaacaaattcgcagag
ctggttttggaaaagccacttgatcgggaacagcaggcgatgcaccgttacgtcctcacg
gccgtggacggcggccagcctcctcggacaggtacagctctgcttgtggtcagggtgctc
gactccaacgacaacgtccctgtgtttgatcagccggtgtactcggtcaacctggccgag
aacgcgcccgtgggcacgctcgtcatccagctgaacgcgaccgactcagacgagggcccg
aacggagaggtcatttactcgttcagcaaccacatctccagcagggtcaaggaactgttc
gatatcgatgcccgaacgggccgtatagaggtcagaggtgaggtggactttgaggagagc
agcctctatcagatttacgtgcaagcgaaagacatgggacctaatgccgtgcccgcgcac
tgtaaagttttggtcaaagtgacggacgtgaacgacaacgcaccggagatcatcttcagc
accgtcacggagtcagtgagcgagaacgcagccactggcaccgtcatcgcgctgctcagc
gtcaccgataaagactctgaagacaacggtcagacgcatgtggagattctcggagacgtt
ccttttaaactcaaaacctctttcagaaattattacacgattgtgactgacggtcctctc
aaccgagagactgtagaggcgtacacagtcaccgttgttgcgagagataaagggattcca
tctctggctaccagcaaatcaatcaaagtgcacgtgtctgacgagaacgacaacgcgcca
acgtttacgcagcccatttatgatgtgtatgtgactgaaaacaacgtccccggtgcttac
atctacgctgtcagtgcagtcgatcctgatgtcggacagaatgcttatataacttactcc
atagtggagtgtgaaatccagggtatgtctgtggtcacctatgtgtccatcaactcggaa
aatgggtatctgtacgccctcagatcgtttgattatgagcaactaaaagacttcagcttc
gtggttcaagccagagactcaggcagccccgagctatggtccaacgccacggtgaacgtc
attatagtggatcaaaacgataacgcgccgtctgtgattgcgcctcttggaaaaaatggc
actgcgcgggagcctttgccgcgctccgccgagccaggctacctggttactcgcattgtc
gccatggacgcagatgatggggagaacgctcgcttgtcctacagtatacagagaggcaac
gagaacgggatgttccgaatggactggcgcaccggggagttgcgcacggcccgccgggtg
tcagtcaaacgagacccacaacagctgtatgagctgctgattgaggtaagggatcacggg
cagcctcctatgtcgtgcagcgctttggtccaggtgacactcgtggacagtcttgtggag
ggccacagtggagagcgcggcacggccaaggccaaagacgcgtctctggacttgacgctt
atcctcatcatcgcgctcggttccgtttccttcatctttctcctggctatgattgttctg
gccgtgcgctgtcagaaggacaaaaagctcaacatctacagcacctgcctggcgagcgac
tgctgctgcctggtgggctgcgggtcgtgcgggtcaggcggctgctgcggccgacaagcc
cgggccgctcggaaaaagaagaaactgagcaagtcagatatcatgctggtccagagcact
aacacagccaacgtgagcgtggcgagcgccgcgcaggtgcccgtggaggagtcagggagc
ttcggctcgctccatcaaagtcagaactactgctaccaggtctgtctgactccggaatcg
gctaaaacggacctcatgttcctgaaggcctgcagcccgtcgcgcagcaacgacacagag
cacaacccttgcggagcaatagtgaccggctatacggaccagcagcaaccggacatcata
tctaacggcagcttgctctccagtgagacaaaacaccagagagcagagctcagttatttg
gtagaccgaccaagacgtgttaacagctctgcgttccaagaagcagatatcgtgagctca
aaagacagcggccatggagacagcgagcagggagacagcgaccatgatgcaatgcatcgc
ggacattcctctggagcagacctgttctccaactgcacagaggagtgcaaagccctcggc
cactcagatcgctgctggatgccaagtttcgtgcccaccgaggcacgacagggcgccgat
taccgcagcaacctgcacgtgccgggcatggattctgtgcccgactctgaggtatttgag
ggcgagactttggcgggcgatcagtcattctcaacctttggcaaagagacgctacaccac
cccaaccagatgcaccaacaccaacatcaacaccatcaacaccacctcaatgcttccacg
ctagagaggaaagagttcgatgcacttctgtgtaactctcgcatgccttacaaagccgcc
tgtctgtcgcggaaaaggatatgctag
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