Labeo rohita (rohu): 127176364
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Entry
127176364 CDS
T09007
Symbol
gpc3
Name
(RefSeq) glypican-3
KO
K08109
glypican 3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lroh00535
]
127176364 (gpc3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lroh00537
]
127176364 (gpc3)
Proteoglycans [BR:
lroh00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
127176364 (gpc3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lroh00537
]
Others
127176364 (gpc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Motif
Other DBs
NCBI-GeneID:
127176364
NCBI-ProteinID:
XP_050983965
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Position
14:complement(7820393..7990504)
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AA seq
587 aa
AA seq
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MPGLKLNGALILCVLMLPFSRPNTQVLDCREVRSSFQFLYPGMKWTPETPVSGSDLQVCQ
PKGLTCCSRKMEERYLLIAKQNMESSLQATSAQLKVLIIQNAALFQEAFDMVLRLGRNST
LTLLREEFPGLGAGASGAVTQLFLEMSLYILGSDANVNDMVSTFFSRLFPFTYRRLLGNG
AVAGISEECLRGAWKGTSAFGSFPKMMMTRLSRSLLATRVFLQALNLGIEVVNTTQHLRA
GRDCGRSLLKLWYCPHCQGLLEARPCRPLCVSTMGACLGGAAEVQPHWRAYVEELGSLAA
AMKGEQDIEAVVLRLHVIIRQALKQAVAAKSKVSAQVSGICAHAPPRVSRATTLSAEHAA
ASSVPHSRPTVNFDPDETLFGRRREFISGLRGFSQFYSGLGEALCSKEPVALNSSLCWNG
QEMTDKFPGPGLKKVPHGSESRQKPPEPVISQIIDKLKHINQLLRMVTLPEKRWRARPGG
GAAKRDPAGQGQADEDEEGLESGDCDDEDECTGVSGLGPPPRRKRLRIFADLADNLAIDD
LTLHELLLTPRLATDTHGGASVPGAAHVPSATFIFTIIIIFVTLGLQ
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcctggactgaagttgaacggtgcgctgattttgtgcgtcctgatgctgccgttctct
cggccgaacactcaggtgctggactgtcgcgaagtgcgctcctcttttcagtttttgtac
ccggggatgaaatggaccccagaaacgccagtctcaggctcagatctgcaggtgtgccag
ccgaaaggcctgacatgctgttctcgcaaaatggaggagcgctacctgctcattgccaaa
cagaatatggagtccagtctccaggccaccagcgcccagctcaaagttctcatcattcag
aatgccgccctctttcaagaggcttttgacatggtgcttcgtctgggtcgtaattccact
ctgacactgttacgggaagagtttcctggtttgggggctggagccagcggagccgtcaca
cagttattcctggaaatgtctctctacatcctgggctcggatgctaacgtaaacgacatg
gtctccacctttttctcccgcctttttcctttcacctaccggcgtctgcttggaaacgga
gcagtggctggcatctcagaagaatgccttcgtggggcgtggaagggaacctctgcattc
gggtcgtttccaaagatgatgatgacccggctgtctcgctcactcctggctactcgggtc
ttcctgcaagcactgaacctgggcatcgaagtggtcaacaccacccagcacctacgtgcg
ggcagggactgcgggcgctcgctgttgaagctctggtactgcccgcactgtcaaggcctg
ctggaggcccggccgtgccgcccgctgtgtgtcagcaccatgggggcgtgtctgggggga
gcggcggaggtgcagcctcactggagggcgtacgtggaggagctggggtcactcgccgct
gccatgaagggggagcaggacatcgaggccgtggtgctcagactgcacgtcattatcaga
caggctctcaaacaagccgtggcggccaaaagcaaagtcagcgcacaggtgagcgggata
tgtgcacacgcacccccgcgggtgtctcgtgccacgacgctgtcggcagaacacgcggct
gcctcgtcggtgccccacagtcgccctacggtgaactttgaccctgatgagaccctcttt
ggacggcgcagggagtttatctcaggtctgaggggcttcagtcagttctacagcggcctt
ggagaagctctgtgcagcaaagagccggtggcactcaacagctccctctgctggaacgga
caggagatgacagacaagtttcctggtccagggctgaagaaagttccacacggctcagaa
tccagacaaaaacctcctgaacccgtcatcagccagatcatcgacaaactcaaacacatt
aatcagcttttgcggatggtgacgttgcctgaaaagcgatggagggctcgaccaggaggg
ggcgctgcaaagagagacccagccggacagggccaggcagatgaggatgaggagggtcta
gaaagtggggactgtgatgatgaagatgagtgtacgggtgtttctggactcgggcctccc
cccagacgcaaacgcctgcgcatctttgcagacttggcggacaacttggcaattgacgac
ttaacgcttcacgagttgctcctgacacccagactggccacagacacccacggcggcgca
tccgtacctggagcggcacacgttcctagtgcaaccttcatcttcaccatcatcatcatc
ttcgtaacattaggtcttcagtga
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