Labeo rohita (rohu): 127176443
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Entry
127176443 CDS
T09007
Symbol
si:ch211-241e1.3
Name
(RefSeq) laminin subunit alpha-3
KO
K06240
laminin, alpha 3/5
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127176443 (si:ch211-241e1.3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127176443 (si:ch211-241e1.3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_I
Laminin_G_2
Laminin_II
Laminin_G_1
Laminin_EGF
BORCS6
Alanine_zipper
DUF6364
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
127176443
NCBI-ProteinID:
XP_050984082
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All DBs
Position
2:complement(2189534..2207234)
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AA seq
1348 aa
AA seq
DB search
MSGSVVRRSAALRALAFGALIVLVSGGPRPEHRSEQHQREQAEWTQRLQYPAGNDAQRVQ
FPDFHDTQRVQFPSIDDPQRCPAGHYLDRSGPTARCVRCSCNGFSNECEENTGRCLNCRD
NTAGDHCERCKEGYYLNAAQRCSVCPCPLSNNANNFAFGCTETDGRLLCLCKDGYTGERC
ERCAPGYYGDPLVYGGYCRPCNCPGNLCDSKTGVCRNSLELQDTNTEEQCEECDDNCAQT
LLADLEKLDIELRRIKDEVDFNSLRPSSKEHLRKLEETITATTNLVNTYNFTIDNQVPKV
NQLERDVINLSEDMDNLKEQARKQSEDSQKALANAESSHQRAKDLDTETQNLLRKIQELL
KQLMDSNSSGSALPNSDLAKLLEQSQNMVMEMQKRSFTTPKEAAKKEQAEANKFLENVKK
IINQCDENEAASKRVDGLLSNYAAKMKELEDLLKQAENMVKKADNQNDINAEGLKDILKR
VKDLEHERDLVQSQIVLAVDQLKETEDMLKMLDDSKTEYEQLAAQLNGAKTKLKDKVRTI
SQAAAKEKIVKQAEEHAENMQKLAKQLQDAVQNVSGRSGVQTALSGIEAYKNITDAVNAA
EEAAKKAKEAADKALNDVSEGDLINRAKNLKNDSNNLLKDAKNAVKDLKGATKDLNNQKE
RLQTAEEKKKALEKELLAIQEGLKGIQRDDIGDIIGAAKEAAAAANRSTSDTVEQLNNIK
AEVSKISISPSVSNMDSVLNNVEMTVKNLSGSIPSLLDKIEEINSQISAGNNVSDNINQI
KELIEQAREAANRIVVPMKFTGKGHVELRPPQDIDDLRAYTTLSLSLQRPEKPLGRGDES
RRRRRQTYEDNLFVMYLGKKDASGDYIGMALRNNILHVIYKLNGKEYDMQASSITESSSD
VAFFDKIDLYRIYQDAQVIQTKQYTSINPKPPQLIQNPGQLTHNLLDLSPEKVVFYVGGY
PDDFRPPASLNYGKYKGCIEFSTFNDKFISLYNFKNAVNINLETPCKRQIPLTISESDYY
EGTGYAKVLLEKFPNFLQISQKMETRTKDALLLYFGDENDDFFYSVSLENGYVVLRGQNK
DNILEPVRSQDVASLSPETDVKVWIIAGREFKVRVGNTEVKRTDVIPQAFKYYYIGGLPK
NLRERYNITSPALKGCVKIGTAAGSTPSIEEKVGVGRGCTNELLMVRKAEFSLGSSLEKL
HEDFSLDVVSLSLGFKSTKPDGILLQNSKNNKNIELSMENGYVLLKFQGSVWKSTKQYQD
GEWHYLTVSGQDQDIELRIDEEDVGQQETGSSSGLYSSSVTLGKDTFKGCISNLYLKRSD
SLYRAEDLSGYSATGNVLLNTCSATRNM
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatcagtagtgcggaggagtgcagcattgagggcccttgcgttcggggccctg
atagtactggtttctggaggacccagacccgaacacaggagcgagcagcatcagagagaa
caggcggaatggacacagagacttcagtatccagcgggaaacgatgctcagcgcgttcag
tttccagactttcacgacacacagcgcgttcagttcccttcaattgacgatccacagaga
tgtcctgctggtcactatctggacagaagtggtccgactgctcgttgtgttcgctgctcc
tgtaacggcttctctaacgagtgtgaggaaaacaccggccgatgtctgaactgccgtgat
aatacagcaggtgatcactgcgagcgctgtaaagagggatattacttaaacgcagctcag
agatgcagcgtgtgtccatgtcctctcagcaacaacgccaacaattttgcatttggatgc
actgaaaccgatggcagacttctgtgtctgtgtaaagacggttacacaggtgaaagatgc
gagcgatgtgctccgggatattacggcgatcctctggtctacggtggatactgtcgtcca
tgcaactgccctggaaacctgtgtgactccaagaccggagtgtgtaggaattctctggag
ctccaagacacaaatacagaagagcagtgtgaagagtgtgatgataactgtgcacagaca
ttactggctgatctggagaagcttgacattgagctcagaagaattaaagatgaagtcgat
ttcaactccctcagaccttcatcaaaagaacacctgaggaagcttgaagaaaccattact
gccacaacgaatctggtgaacacgtacaacttcaccatcgacaatcaggtgcctaaagtt
aaccagctagagcgagatgttattaatctgtctgaagatatggacaatctgaaagaacag
gccaggaagcaatctgaggattcgcagaaagctcttgctaatgctgaaagcagccaccaa
agagcaaaagatctggacactgagacacagaacctcctcagaaaaatacaagagctcctg
aagcagctgatggactcaaacagcagtggatcagctctgcccaactccgacttagccaaa
ctcctggagcagtcacagaacatggtgatggagatgcaaaagcgaagcttcaccacgccg
aaagaagcagctaagaaagagcaagctgaagcaaacaaatttctagagaatgttaaaaag
atcataaatcagtgcgacgagaatgaggcggcgtccaaacgtgttgatggtctactgagc
aactatgcggccaaaatgaaagagttagaggatttgctgaaacaggctgaaaatatggtg
aagaaagccgacaatcagaatgacatcaacgctgaaggccttaaagatattctgaaacga
gtgaaagatctggagcatgagagggaccttgtccagagtcagattgttcttgcagtcgat
cagttgaaagaaactgaggacatgctgaaaatgctcgatgacagcaaaacggaatatgaa
cagcttgcggcgcagctcaacggagcaaagactaaactcaaggataaagtccgtaccatc
tcacaagcggcagccaaagagaaaatagtcaaacaggcagaagaacatgcagaaaacatg
cagaaactggccaaacagctacaagatgctgtacagaatgtgagtgggcgctctggtgtg
caaaccgctctctctgggatagaggcgtacaaaaacatcacagacgctgtcaacgctgca
gaggaggcggcgaagaaggccaaagaggcggcagacaaagcgctcaatgatgtcagtgaa
ggagacttaatcaacagggccaaaaatctgaaaaatgatagcaataacctacttaaagat
gccaaaaatgcagttaaagatcttaaaggagcaactaaagacctcaataatcagaaggaa
cgcctgcaaactgctgaggagaaaaagaaagcactggaaaaggagttgctcgctattcag
gagggtttaaaaggaattcagagagatgacattggtgatattatcggcgcggctaaggaa
gcggcagcggcagccaatcgctccacgagtgacacagtggagcagctaaacaacatcaaa
gcagaagtgagcaagatctccattagtccttctgtctctaatatggacagtgttctcaat
aacgtggaaatgaccgtcaaaaatctgagcggctccatcccgtccctgctggataaaata
gaggagatcaattctcagattagcgccgggaacaacgtgtctgataatattaatcagata
aaggagctgatcgagcaagcgcgagaggctgctaacagaattgttgtgcccatgaagttc
accggtaaagggcatgtagagcttcgtccgcctcaagacatagacgacctgcgggcgtac
accactctctccctgtccctccagagacccgagaaacccctcggtcgaggcgatgagagc
agacggcgccggcgtcagacatatgaagacaatctgttcgtcatgtaccttggaaagaaa
gacgcatccggagactacatcggcatggctcttcgcaataacatcctgcacgtcatttat
aagctcaatggaaaggagtacgatatgcaagcatccagcatcactgagtcctcatctgac
gtggctttcttcgacaaaatcgacctttacagaatttatcaagatgcacaagtcattcaa
acaaagcagtacacgtcaatcaatccaaagcctccacagctgatacaaaacccgggtcaa
ctgactcacaacctgctggatctcagtccagagaaggtggtcttctatgtcggaggatat
ccagatgacttcagaccaccggcctctctcaactatggcaaatacaagggctgcattgag
ttttccaccttcaatgacaaattcatcagtctgtacaactttaagaacgctgttaatatt
aacttagagacaccttgcaagagacaaatcccactaacgatctcagagtcagactactac
gaaggcaccggttacgccaaagtcctgcttgaaaaattccccaactttctgcagatcagt
cagaaaatggaaaccagaactaaggatgctcttttgctgtattttggagacgagaatgac
gactttttctacagcgtctctcttgagaacggttacgttgttctgcgtggccaaaacaaa
gataatattttagagccagtcagaagtcaggatgtggcaagcctttctccggaaaccgat
gtgaaagtttggattattgcaggaagagagtttaaagtccgagtagggaacacagaggtc
aaaaggacggacgtcattccacaagcgttcaagtactactacatcggcggattacccaaa
aatttgcgtgagagatacaacatcactagcccagctctgaaaggctgtgtgaaaatcggt
acagccgccggctccaccccgagcattgaagagaaagtgggcgtcggcagaggctgcact
aatgagctcctgatggtcaggaaggctgaattcagcctcggcagttcattggagaaactc
catgaagacttcagcttagacgttgtcagtctgtcactgggcttcaagagtacaaaacca
gacggcatcctgctgcagaacagcaaaaataataaaaacattgagctttctatggagaac
ggatacgtgctcctgaaattccagggcagcgtctggaagtctactaagcagtatcaggat
ggtgaatggcattatctcactgtttctggacaggaccaagacattgaacttcgaatcgat
gaagaagatgttggccagcaagagacgggatcttcatctggactgtattcatccagcgta
accctgggcaaagacacattcaagggctgcatatccaacctttacctgaagagaagtgat
tctctatacagagcggaggatctgagcggatactctgccacaggaaacgtgctgttgaac
acatgcagcgccacacgcaatatgtag
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integrated database retrieval system