Labeo rohita (rohu): 127176469
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Entry
127176469 CDS
T09007
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127176469 (rlim)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127176469 (rlim)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127176469 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
SPT6_acidic
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
127176469
NCBI-ProteinID:
XP_050984123
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All DBs
Position
14:31698619..31709831
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AA seq
639 aa
AA seq
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MEGQDNADQGSSDQSEIQRRRQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
ADELLSRLRQVKDGPESPSNGSAEERREGPGATEMEGTEENPSGETLLDWLNTVRQTGNT
TRSGYRGNQSWRAVSQTNPNSGDFRFSLEINVNRNIAEQQTQTERLEGGQERPDGPVSEP
ESLMETAEVVEEPVVDELAVIVEPELPVPSTLSLNREVDAPNPPAPAPAPAPPTLPPVEQ
PRRGQIRARSRSPEQRRTRARTARGRSPLNLERLDGLPPTQHGLPSRNPEILPEPQVEGS
SRTRQLFLSRQSTVETEPQESGAAPEVPGAPQEREAAAGEAGASGRRPPTIMLDLQVRRV
RPGEYRQRDSIANRTRSRSQTSNNTLLFETERGGFRRTFSRSERAGVRTYVSTIRIPIRR
ISDTGLGEATSLALQSMIRQIMTGFGELSYFMDSDYPESNREDSPAADLADGLGTPDAAS
AGTAASEADSYLPGNGGSNPVGLEARTEEREADGGSPGAAGPRENRGRQRAPISLDETGS
LPFLRLAHFFLLNEEDDDQPRGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGNKLRK
LPCSHEYHVHCIDRWLSENSTCPICRRAVLVSTNRESVV
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcaggataatgcagatcagggcagcagtgatcaatctgaaatacaacgcaga
agacagctggaccgtctggacagagaagaggccttctaccagtttgtcaacaatctcagc
gaggaagactatcggctcatgagagacaacaatctgctcggcactcctggtgaaattacg
gcagatgaactgttaagccgccttcggcaggtcaaggatggccctgagtcgcccagcaat
ggctccgctgaggagagaagggaaggacctggcgcaacagagatggagggcactgaggaa
aaccccagtggggagacccttcttgactggctcaacacagtacgacagacggggaataca
acaaggagtggataccggggtaaccagtcatggcgggccgtgagccaaaccaatcccaac
agtggtgatttccgtttcagcttggagatcaatgtcaatcgcaacatagctgagcagcaa
acgcagacggaacggctggaagggggccaggaaagaccagatggccctgtgtctgagccg
gagagtcttatggaaactgcagaggtggttgaggaaccagtggtggatgagttggcggtt
atagtagagccagagctaccagttcccagtaccctgtctctaaacagggaagttgatgca
ccaaatccgccagctccagctccagctccagctcccccaaccttgcccccagtagagcaa
ccacgtcggggtcaaattagggctcgaagtagaagcccagagcagcgacggacaagggct
cgcaccgcaaggggtcgctcaccactcaacctcgaaagattagatggacttccgcctact
cagcacggcctgccctctcgcaatcctgagatccttcctgagccccaggtcgagggaagc
tcaaggactcggcagttgtttttatctaggcagagcacagtggaaacggaacctcaagaa
tcgggagcagcccccgaggtacccggagctccacaggagagagaggcggccgctggagaa
gcaggagcctcgggtcgccgtcctccaaccataatgctggatttgcaggtacgcagggtg
cgtcccggagagtaccgccagagagacagcatcgctaaccgtacaaggtctcgttcgcag
acctccaataacactttattgttcgagacagagcgtggaggtttccgccggaccttctcc
cgttcggagcgggcaggagtgagaacgtacgtcagcactatccgcattcccattcgcagg
atctcggacactggactcggggaagcaacttctttggctctgcagtctatgattcgacag
atcatgactggcttcggggagcttagctactttatggactcggactatccggaatcgaac
cgtgaagacagcccggctgcagatcttgccgatggactgggtacccctgatgctgcctct
gccggaaccgcagcgagtgaagcggattcctaccttcctgggaatggaggctctaaccca
gttggtttagaggcacggacagaggagagggaagcggatggtggaagtcctggtgctgcc
ggtcctcgggagaaccggggcaggcagcgggctcccattagcctggacgaaaccgggtct
cttccctttctgcggctcgcgcacttcttcttgctcaacgaggaagacgacgaccagccc
agaggtctcaccaaagagcagatcgacaacctgtccatgcgaaactttggcgagagcgat
gcgctcaaaacctgcagcgtctgcatcacagagtacgccgaaggcaacaaattacggaag
ctgccctgctctcacgagtaccacgtgcactgtatcgaccgctggctttcagagaactca
acctgccctatttgccgcagggcggttctggtttccaccaaccgagagagtgtcgtctag
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