Labeo rohita (rohu): 127176500
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Entry
127176500 CDS
T09007
Symbol
tbc1d2
Name
(RefSeq) TBC1 domain family member 2A
KO
K20165
TBC1 domain family member 2A
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127176500 (tbc1d2)
Membrane trafficking [BR:
lroh04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
127176500 (tbc1d2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_alsin
TMF_TATA_bd
PH_13
PH_3
PH_8
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
127176500
NCBI-ProteinID:
XP_050984163
LinkDB
All DBs
Position
14:20767291..20784963
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AA seq
930 aa
AA seq
DB search
MESEGNSRNPPLPDVHITPADECVSSEETPKQSLSHSDEAQDKKDTQINAAESDGTSATL
RGTPTPPNTKLCGYLNKQGGPLRAWKSRWFVYEEKSCQLFYYRMAQDINPLGKVDLSRAT
FSYPLQGEEGTFHIQTPERTVILKAHNKDARMYWLQQLQLKRTLYREQHAELQSIPRPDN
HKLESTPSANNCRADFLPMVKTPSGLVGEEAASLPAPGLNNPLNMSIKHPLIELQNTINS
FRNRHSQEIRQSVFHIDDPTDTQKTPSSKTSTLAAPTPSSSQSPESPARSEKDLSTILPV
RKNSKETKELKDTSRLQHEKLFLAEEVKAQKELVLLLHKVLEAAQLEKRTCSQFLAAEGE
QERLELLRHGERRAAELRDHLESLQQENENLRRDLKQRDAQIAALQESIQLLVQKNQTKQ
EVIVKLSEKLAVCGEDQQSTSGLQSEALKQLTVENENLKDDLKAYKTQNQYLNSEIYHLT
TLWRKSSEQEQSLIVKCAVLEANSCQMESRYLGILQTLQDSKELNPEQREAVKKVVKDAV
RADLSTAVKLNSIRDYDEYGFKIAMDYRVEDLKLLAKIQPFEIRSQNLLNQEECDGAFLA
RCTQLLFGRPEGELSSSTELKNLLRTGLPREYRARVWRFMIQTRTKSLKERHPVRYQELC
EKSRTSPHLVPRQIQLDLDRTLTSNQFFSPPSSPLIQKLERVLQAFSWQNPTIGYVQGFN
RLAAIALLVLQEEEDAFWCLVVIVEYIMPQNYYTKDLVGCQADQRVLKDLMSEKLPRLTA
HLEALKVDISLITVEWFLVLFVECLSTRILFKVWDAFLYEGIKVIFRYALALFKYREEAI
LKINDSSEMYQYLRIFPSTIADGRKLTSIAFNDMNPLPMKLLQNRRAAHLERLHAEIKEL
ENLRKAYKAEHVQCKDKELDTLASEDEEEV
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgagggaaactccaggaatccacctctaccggatgtgcacataactcctgca
gatgagtgtgtcagctctgaggagaccccaaaacagagtttgagtcattcagatgaggct
caggataagaaagacactcagatcaatgctgctgagagtgatgggacctctgccaccctc
agaggaacacccactcctcccaacactaaactatgtggctacctcaacaagcaaggtgga
cctctcagagcctggaagtcccgctggtttgtctatgaggaaaagagctgtcagctgttt
tactaccgcatggcacaggatatcaatcccctgggcaaggtggatctgtctcgtgccaca
ttcagttacccgctgcagggagaggagggaacctttcatatacagacaccagagcgcacc
gtcattcttaaggcacataacaaggatgcccgaatgtactggttgcagcagctgcagttg
aaacgtacgttatacagggagcagcatgctgaacttcagtccatacccagaccagacaac
cacaaattagaaagcactccatcagcaaacaactgccgtgctgacttcttgcccatggtg
aagacgccttctggtctggtgggtgaagaagctgccagtctgcctgcaccaggattaaac
aacccgctcaatatgtcaatcaaacatccactaattgagctccagaacacaataaacagt
ttccgtaaccggcactcacaggaaattagacaaagtgttttccatattgacgacccaaca
gacacccaaaaaacaccctcatctaaaacatccactttagcagctcccacacccagttca
tctcaaagcccagaatcccctgctaggtctgagaaagatctctccaccattttaccagtc
agaaagaatagcaaagaaactaaagagctcaaggacacatctcgacttcaacatgaaaaa
cttttcctggcagaagaggtcaaagcacagaaggagttggtgttgctgttgcataaggtg
ctggaagccgctcagctggagaaacgcacctgttctcagtttctagccgcggagggggag
caggagagattggagctcctcaggcatggtgagcggcgtgcggccgaattgcgagaccat
ctggagtccctgcagcaagagaacgagaacctacggagggatctgaaacagagggatgca
caaatcgctgcactccaggagagtattcagctcctggtgcaaaagaatcagacaaaacag
gaagtgatagtgaagctgtctgagaagttagccgtctgtggggaagaccagcagagcacc
agtggtctgcagtcagaggccttaaaacaactaacagtcgagaatgagaatttgaaagat
gatttaaaggcatataaaactcagaaccagtacctaaactctgagatctaccatctgacg
acgctttggagaaaaagttctgaacaggagcaaagtctgatagtaaagtgtgctgttctg
gaggccaatagctgtcagatggaaagcagatacttgggaatcctccagacactccaggat
agtaaagaactgaatccagaacagagagaagcagtcaagaaggtggttaaggatgcagtt
cgggcagacctgagcactgccgtcaaactaaactcaatcagggattacgatgaatatgga
tttaagattgcaatggactatagagttgaggacctaaagctccttgctaagatccagccc
tttgagatccgatcccaaaacctcctcaaccaggaggaatgcgacggggcgtttttggct
cgttgcactcagctcctgttcggacgtcctgaaggagaactatcttcgtccacagaattg
aagaatcttctccggacgggtttaccgcgcgagtaccgtgcgagggtttggcgttttatg
atacagactaggaccaagtctcttaaagagcgtcatcccgtccgctatcaggaactgtgc
gagaagagcagaacctcacctcacctggtgcccagacagatccagctggacctggatcgc
acgctgacctccaatcaattcttctcccctccttcaagccccttaattcagaagctggag
agagttctacaggcattctcatggcaaaaccccaccatcggctacgtgcagggattcaac
agattggcggccattgctctgctggtactacaggaagaggaggatgccttctggtgcttg
gtagtgatcgtggagtacatcatgcctcaaaattactacactaaagacctggttggctgt
caggccgatcagcgtgtactaaaggacctcatgtctgagaagctgcctcgacttacggct
catctggaagcgctaaaagtagacatttcactcataactgttgaatggttcctggtgttg
tttgttgagtgtctgtctacacgcatactgtttaaagtatgggacgcctttctgtatgag
ggcatcaaggtgatattccgatacgcactggctcttttcaaatacagagaggaagccatc
ttaaagatcaatgacagttctgagatgtaccagtatctccgcatcttccccagcaccatt
gcagatggaaggaagctgacaagcatcgccttcaacgatatgaacccactgcccatgaag
ctgctacagaaccgacgcgccgcgcatctggaacgcctccacgctgagattaaagagctg
gagaacttacggaaagcatacaaagctgaacacgtccagtgcaaagacaaagaactggac
accctggctagtgaagatgaagaggaggtataa
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