Labeo rohita (rohu): 127176558
Help
Entry
127176558 CDS
T09007
Symbol
elp1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lroh03016
]
127176558 (elp1)
Transfer RNA biogenesis [BR:
lroh03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
127176558 (elp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_EML_2
TPR_GEMI5
Beta-prop_NUP159_NUP214
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
127176558
NCBI-ProteinID:
XP_050984263
LinkDB
All DBs
Position
14:complement(20749555..20766279)
Genome browser
AA seq
1318 aa
AA seq
DB search
MRNLSLLQRFRCVDLSILGSPQCFTIRSETGTVLVASELAITEFDPRTEEVYKEVSLTAE
GYLPEDGSGVVVAIQDLPDQESVCVATANGDVILYNLNTSQLECVGSVESGLTGMTWSPD
QELVTLTTGQETIIMMTKDFEPITEVAINQDDFGEDKFITVGWGKKETQFHGSEGKQAAQ
RKAAEVQPALPWDDRKPRITWRGDGQFFAVSAVCPQTGARKVRIWNRECVLQATSEVVNG
LEQPLCWKPSGSLIASTQRHPNKHNVVFMEKNGLLHGDFTLPFGKEQVKVKELLWNSDST
VLAVWMEDLKPGENDHPNTYIQLWTVGNYHWYLKQSLHFGNEPLRAPVCVCWDPEKPLRL
HLLTRGWASYTYDWGWSTQRSHGTDCCDNANVAVIDGEKVLVTTFRQCVIPPPMCAFELQ
LPVPVNLVTFHSQAQRTNELAALTADGHIYVYGQGGGVENGGVSGVAGFKVISAPLVLRK
TYRIAMVQEEPLTLRLLLWLSEDLFLAVAHGRRMTRLLKLTPLDSQDPKDTLEIRSDVPV
DGFVISLCHSLRSGTVTLQLDDGQIRKVHMDSSELSLTEWKDSSGNTINFPRPCVQTALC
TLSGEEHLIGLTERSHLYIGDSLVASNISSFVVYDDFLLLTTHSHMCHCLNLSTLSIKGL
QSALSSEANQNDETVRKVERGSRIVSVVPQDTRLILQMPRGNLETIHHRALVLAQLRKWL
DGLRFKDAFECMRKLRINLNLIYDHNPTVFLDNIEMFLSQIDSINYINLFLTELKEEDTT
TTMYQCPSRSASSSVSGKGGKKVDIVCDALRATMETLDPQKYCLCILTSHVRKTTPELEI
ALQKVHELRVNPPSGSNSVSAEEALKYLLFLVNVNELYEHSLGTYDFDLVLMVAEKSQKD
PKEYLPFLNMLKTLEPNYQRYTIDKHLKRYRKALHHLSKCGKEHFTEVLNLVKDQRLYSD
ALELYPSDSEQYKTLSVAYAEHLVEQQQAEQAGLLLWRCGENARALQAFVSCTSWRNALA
VATHIPLPPEQLALLARDLAEKLLEARRHTEAALCLEQYAMDCEEAISALIQGAAWEEAL
RLIYLYNRQDIIETDLKSALLDAHSNQTSFLESQKALFIRHKNRLAVVRELKAKARLELF
DEDGPDCADAELYSEASSVLTGSHLGSKYSRSNSRISSRSSKNRRKAEGKKYSLKEGSPF
EDIALMNALIQIITVVDKMREEVHSLLKALVLFQFDGPASSLQRDYGELLQLMETALPEI
WTENLQQGQAPLTGPNSTANSIMASFQQQRPAVPQQGTEVLTTPKMRNTVKWKLSILK
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacctcagtctgctgcagcgcttcagatgtgtggatctttctatcctgggatcc
ccacagtgtttcaccatcaggagtgagactggaactgtactggtggcctctgagcttgcc
atcacagaattcgaccctcggaccgaagaggtttataaagaggtttcgctgacggcagag
ggctatctcccagaggacggtagtggagttgtggtggcgatacaagatctgccagatcag
gagtcagtgtgtgtggccactgccaatggtgatgtcattctctacaacctcaacaccagt
cagttagaatgtgttggcagtgtggaaagcggtctaactggcatgacgtggagcccagat
caagagctcgtgactctgaccacaggtcaggagaccattatcatgatgaccaaggacttt
gagccgataaccgaggtggcgatcaatcaggatgactttggcgaagataagttcatcaca
gtgggttgggggaagaaggagactcagtttcatggctctgagggcaaacaggccgcccag
cggaaagcagcggaagtgcagcctgccctgccatgggatgacaggaagccaagaatcact
tggcgtggtgatgggcaattctttgctgtcagtgctgtttgtcctcagacaggtgctcga
aaggttcgaatctggaaccgagagtgtgtcctgcaggccaccagcgaggttgtaaacggt
ctggaacagcctctctgctggaaaccctctggcagcctgatcgcttcaacacagcggcac
cctaacaaacacaatgtggtgtttatggaaaagaacggcctgttgcatggagattttact
ctgccttttggaaaggaacaggtcaaggtgaaggagctgctgtggaacagcgactctact
gttttggctgtttggatggaggacctgaaacctggagagaacgaccatcccaacacatac
attcagctgtggacagttgggaattaccactggtatctaaagcagagtttgcattttggc
aatgagcccctcagggctccagtgtgtgtgtgttgggatccagagaagcccttgcgtctc
cacctcttgactcgaggatgggcgagctacacctacgactggggctggagcacacagcgc
agtcatggtacagattgctgtgacaatgccaatgtggcagtgattgatggagaaaaagtc
ctggtgacgacattccgccagtgtgtgatccctccacctatgtgtgcttttgaacttcaa
cttcctgttccagtcaacttggtcaccttccattctcaagcccagaggaccaatgagctg
gctgctctcacggccgacgggcatatttatgtgtatggtcaaggtggtggagttgaaaat
ggaggtgtatctggggtagccggctttaaagtcatctcagcaccattagtcttaagaaag
acttacaggatcgccatggttcaggaggaacctctgacgctgcgcttgctgctgtggtta
agtgaggatttgtttttggctgtggcccacggaagacgcatgacccgtctgctgaaactc
acccctttagacagccaggaccccaaggacacgctggagatcaggtcagacgttccagtg
gatggttttgtgatcagtttgtgtcacagcctcagaagtggcaccgtgaccctgcaactt
gatgacggacagatccgaaaagttcacatggactcatcagagctcagtctaacagaatgg
aaggattcttctggtaataccatcaactttccccggccttgtgttcagacggcactatgt
accctcagcggagaggaacatttgataggccttacagagagatctcacctgtacatcggc
gattcactggtggcctccaatatctcctcgtttgtagtttatgacgacttcctcctgctc
accacacactctcacatgtgccactgtctcaacctcagcacgctttctattaaaggtctg
cagtcagctctgagctcagaagctaatcagaatgatgagactgtacgaaaggtagaacga
ggctctcgtatcgtttctgtggttcctcaggacaccagactcatcctgcagatgccacga
gggaatctggaaaccatccatcatcgagctcttgtgcttgctcagctcagaaagtggctt
gatggtctcagatttaaagatgctttcgagtgcatgaggaagctgcggatcaacctcaac
ctcatttatgaccacaatccaactgtgtttcttgacaacattgagatgttcctgagtcag
atcgactccattaactacatcaacttgttcctcactgaactcaaagaggaagacaccact
acaacaatgtaccaatgtccttcacgctcagcctccagttctgtctcaggtaaaggagga
aagaaggtggacatcgtctgtgatgctttacgggcaacaatggagactctcgacccgcag
aagtattgtttatgtattctgacatcacatgtgagaaaaactacacctgaactggaaatc
gctctacagaaggtccatgagttacgagtgaacccaccaagtggcagcaacagtgtgagc
gcagaggaagccctgaagtatcttctcttcctcgtcaacgtgaatgagctgtatgaacac
tccctcggcacctacgattttgacctagtgctcatggtggctgaaaaatcccagaaggat
cctaaagagtacttgccatttctgaacatgctgaaaaccctggagccgaactaccagcgc
tacactatcgataaacacctcaagagatacaggaaggccttacatcacctcagcaagtgt
ggtaaagaacacttcacagaggtgttaaacttggtaaaggatcagagactgtacagtgat
gctcttgagctctatccttcagacagtgagcaatacaagaccctgagcgtggcctatgcc
gagcatctagttgagcagcagcaggcggagcaggcgggactgttactctggcgatgtgga
gagaacgcccgtgccctgcaggccttcgtcagctgtacaagctggagaaatgccctcgct
gtggcaacacacatcccattaccacctgaacagcttgcactgcttgcccgagacctggca
gagaaacttctagaggccagaaggcacacagaagccgccctgtgtttggaacagtatgct
atggattgtgaagaggccatctctgctctgatacagggagctgcatgggaagaagcgctg
agattgatttatttgtacaacagacaggatatcattgagactgatctgaagtctgctctt
ctagatgctcacagtaatcagacgtctttcctggagtcccagaaggctttgttcatccgt
cataaaaaccgccttgctgtggtccgagaactcaaagccaaggccagactggaattattt
gatgaggatggccctgactgtgcagacgctgagctctactcagaggccagcagcgtcttg
accggcagccatcttggctcaaaatactcacgcagcaactctcgcatttcatcgaggtcg
tctaaaaatcgtaggaaagcagaggggaagaaatacagcctgaaggagggaagcccattc
gaggacatcgccctcatgaacgcacttattcaaatcatcaccgttgttgataagatgaga
gaggaagtccacagcctgcttaaggctctggtgctcttccagttcgatggtccggccagc
agcctgcagagagactacggtgagctgcttcagctcatggaaacggcccttcctgagatc
tggactgagaacctgcagcagggccaagctcctctcacaggtccaaactcaacagctaat
agcattatggcatcatttcagcagcagagacctgctgtgccccagcaaggcacggaagtc
ctgactactccaaagatgaggaacactgtcaagtggaaactcagcattctcaaatag
DBGET
integrated database retrieval system
