Labeo rohita (rohu): 127176579
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Entry
127176579 CDS
T09007
Symbol
itga6l
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-6
KO
K06485
integrin alpha 6
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04382
Cornified envelope formation
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04514
Cell adhesion molecule (CAM) interaction
lroh04518
Integrin signaling
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127176579 (itga6l)
04514 Cell adhesion molecule (CAM) interaction
127176579 (itga6l)
04518 Integrin signaling
127176579 (itga6l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127176579 (itga6l)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127176579 (itga6l)
04810 Regulation of actin cytoskeleton
127176579 (itga6l)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127176579 (itga6l)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127176579 (itga6l)
04515 Cell adhesion molecules [BR:
lroh04515
]
127176579 (itga6l)
04090 CD molecules [BR:
lroh04090
]
127176579 (itga6l)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127176579 (itga6l)
Exosomal proteins of breast milk
127176579 (itga6l)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin alpha subunits
127176579 (itga6l)
CD molecules [BR:
lroh04090
]
Proteins
127176579 (itga6l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
CLIPPER
NPCBM_assoc
Motif
Other DBs
NCBI-GeneID:
127176579
NCBI-ProteinID:
XP_050984293
LinkDB
All DBs
Position
14:complement(14332845..14346612)
Genome browser
AA seq
1040 aa
AA seq
DB search
MLFSQWALLLTVWMLRPPQVSAFNLDTQNVIKKRGEANTLFGFSMAMHHQLKPSEERVLL
IGAPRAKALPSQNANISGGLYRCKFTTESDDCERIPVDIKERPINIPGQDYRENQWLGVR
VRSQGRGGKVVTCAHRYQDWSFQNRRLLGRCFVLEQDLKLLTDGAATRTICRNRDPEKHK
FGYCQQGVSVAFSKDNKYLVYGAPGAYDWKGIVHMEPIENFSLETYETGDNNQRQQELIP
VEISSFLGFAVDTGMNLMKKGELNVVAGAPLSNHSGEVLLLRPEEKAETRDLKAEYILQG
PGLASSFGYDLAVVDLNADGWDDLIVGAPEFSKENMDEDVGGAVYVYINQAKGQNWNQIK
PVCLYGKRDSMFGLAVAHIGDINQDGYQDFAVSAPNEDSGRGRVYIYHGSAAGFRQKPEV
LDAGDPGIKSFGYSLAGNMDIDDNGYPDLVVGSLSDTVQVYRTKPVVNIEKTLTLSPNTI
DFKAQDCKTSSCILTAQSCFTYTAQLPTYNHKLRIKYTLKADTVRTERGLSSRVVFMNPE
DAQGYQELSVQGKQECFQTALVLLGDIQDKLTTIFISLSVSLPSNNPKQRVRNLPGLEPV
LNPLQENATKAQVTFLNAGCGNDNICQSNLQLQYSFCTKDQEEDKCDPLAMENDIPVISP
GDKNVALEVTVTNTGGDDAHQSQLSVTFPEFLQLSSVEPKKSSETQVQCNPNEYKTQANC
QLGNPFKRDSEVSFFLILNTERLSLRVTSANVTMLLKTISIQDIPVVVAEAKIIFELHLK
IVGLAKPSQVFFGGEVKDEKAMKSESDIGSLVQYEFRIINVGRPLKSFGSVVLHIQWPKA
TKEGKWLLYLMQIKDIEKNIIHCTPAEAINPLRFIKASSRGRREVERESGLKALASTTDF
FPFLGNKRKYKTLTCADDLRCVEIKCPLEAVDSTTAVVLHARLWNNTFLEEYNSLNYLDI
VLDAFLTLNGTLANIGMQPSDTKVKLTVFRESKPALLSRVPWWVIMFSILTALLVLGLLI
YLLRKFGCLNCGVCAKEKKV
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcagtcagtgggctctcctgttgaccgtgtggatgcttcggccaccgcaggtt
tctgcttttaacctggacacgcagaacgtgataaagaagcgtggagaagcgaacactttg
tttgggttttctatggccatgcatcatcagcttaaaccttcagaggaacgcgtattgctg
attggagcccctcgtgctaaagcattgcccagtcaaaatgccaatatatctggaggtctg
tacagatgtaaattcacaacagaatctgatgattgtgaacgcattcctgttgatataaaa
gaacgtcccattaacatccctggacaagattatagagaaaaccaatggctgggtgtccgt
gtccgaagtcagggtcgaggaggcaaagtagtgacttgtgcccacaggtaccaggattgg
agttttcaaaaccggcggttattgggcagatgttttgtcctggaacaggaccttaaattg
ttgacagatggagcagccacaaggacaatttgtagaaatcgggacccagaaaagcacaaa
tttggctactgtcaacaaggtgtctctgtagcattttctaaagacaacaaatatcttgtt
tatggagctccaggagcgtatgactggaaaggaattgtgcacatggagcctattgaaaac
ttctctttagaaacctatgaaacgggagataataatcagcgtcaacaagagcttattcct
gtggaaatcagcagctttttaggctttgctgtcgatactgggatgaacctaatgaagaaa
ggagagctgaatgttgtggccggagctccgctctcaaaccacagtggagaggttttgctg
ctgagacctgaagaaaaggcagaaacaagggacttgaaagctgagtacatccttcaaggc
ccaggtttggcctcttcctttggctatgacctcgctgttgttgacttaaatgcagatggg
tgggatgatcttattgtgggtgcacctgaattctccaaagaaaacatggatgaagatgta
ggaggggctgtgtatgtttacatcaaccaagccaaaggacaaaactggaaccaaatcaaa
ccagtgtgtctgtatgggaaaagggactctatgtttggactagcagtcgcacatattggg
gatatcaatcaagatggataccaagattttgcagtgagcgctcctaatgaagattcaggg
agaggtcgagtgtacatatatcatggttcagctgcagggtttcgtcaaaaaccagaggtt
ttagacgctggagaccctggtatcaaatcgtttggctattctctggctggaaacatggat
atagatgataatggctatccagaccttgttgtgggttcactttcagatactgtgcaagtt
tataggactaaaccagtggtaaacattgaaaagaccttaacattatcaccaaatactatt
gatttcaaggctcaggactgcaagacatcttcatgcattcttacagctcagtcctgcttc
acgtacactgcccaactgcctacatacaatcacaaattgaggatcaagtacacgctaaag
gctgatacagtacggacagagaggggtctttcttcacgagtggtctttatgaaccctgag
gatgcacagggataccaggaattgtctgtccagggcaaacaagagtgtttccagaccgct
ctcgtgctgctgggagatatccaagacaagctgactaccattttcatcagcctgtccgtt
tctttgccatctaacaatccgaaacagagagtcagaaacctccctggcttagagccagtt
ctgaaccctctgcaagagaatgcaaccaaagcacaggtcacctttttaaatgccggctgt
ggaaatgacaacatctgtcaaagtaacctgcagctccagtatagcttctgcaccaaagac
caagaagaagacaaatgtgaccctctagccatggaaaatgatattcctgtcatttctcct
ggtgataaaaacgttgccctggaggtcaccgtaaccaacacaggtggagatgatgcacac
cagagtcaactttctgtgacttttccagaatttctgcaactatcatcagtcgagccgaag
aagagtagtgaaactcaggtgcagtgtaaccccaatgaatataaaacacaggctaactgc
caacttggaaatccttttaaaagagactcagaggtttcgttcttcctgatacttaacaca
gaaagactttccctgagagtaacaagcgctaatgtgactatgctgctaaaaacgatcagc
attcaagatattccagtagttgtcgcagaagcaaaaattatatttgaactgcatctgaaa
atcgttggtcttgctaaaccttcccaagttttttttggaggagaagttaaagatgagaaa
gcaatgaaatcagaaagtgacatcggctctttggtccaatatgagttcaggatcattaac
gtcggtcggcccctgaagtccttcggttcagttgtgctacacattcagtggccaaaagca
accaaggaaggaaaatggctcctgtacctgatgcagatcaaggatatagaaaaaaatatt
attcactgcacgccagcagaggccatcaacccactcagatttatcaaggcatcatccaga
ggacggcgtgaagtagagcgtgaatcaggcctgaaggctcttgcctccactactgatttt
tttccatttttgggcaacaaaagaaagtataaaaccttgacatgtgctgatgacttaaga
tgtgtggagataaagtgccctcttgaggcagtggacagcacaacagctgtcgttcttcac
gcacgcttatggaacaatacttttctcgaggagtataattcattgaactacttggatatt
gtactggatgcctttttgacccttaatgggactcttgcgaatattgggatgcagccatct
gatactaaggtgaagctaactgtttttcgtgaaagcaagcctgctttgctcagtcgagtc
ccatggtgggtcattatgttcagcatattgaccgcactgctggtactgggtctcctcatc
tacctgttaaggaagtttggatgcttgaattgtggcgtgtgcgccaaagaaaagaaagta
tag
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