Labeo rohita (rohu): 127176579
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Entry
127176579 CDS
T09007
Symbol
itga6l
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-6
KO
K06485
integrin alpha 6
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04514
Cell adhesion molecules
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127176579 (itga6l)
04514 Cell adhesion molecules
127176579 (itga6l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127176579 (itga6l)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127176579 (itga6l)
04810 Regulation of actin cytoskeleton
127176579 (itga6l)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127176579 (itga6l)
04515 Cell adhesion molecules [BR:
lroh04515
]
127176579 (itga6l)
04090 CD molecules [BR:
lroh04090
]
127176579 (itga6l)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127176579 (itga6l)
Exosomal proteins of breast milk
127176579 (itga6l)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin alpha subunits
127176579 (itga6l)
CD molecules [BR:
lroh04090
]
Proteins
127176579 (itga6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
DUF11
NPCBM_assoc
Motif
Other DBs
NCBI-GeneID:
127176579
NCBI-ProteinID:
XP_050984293
LinkDB
All DBs
Position
14:complement(14332845..14346612)
Genome browser
AA seq
1040 aa
AA seq
DB search
MLFSQWALLLTVWMLRPPQVSAFNLDTQNVIKKRGEANTLFGFSMAMHHQLKPSEERVLL
IGAPRAKALPSQNANISGGLYRCKFTTESDDCERIPVDIKERPINIPGQDYRENQWLGVR
VRSQGRGGKVVTCAHRYQDWSFQNRRLLGRCFVLEQDLKLLTDGAATRTICRNRDPEKHK
FGYCQQGVSVAFSKDNKYLVYGAPGAYDWKGIVHMEPIENFSLETYETGDNNQRQQELIP
VEISSFLGFAVDTGMNLMKKGELNVVAGAPLSNHSGEVLLLRPEEKAETRDLKAEYILQG
PGLASSFGYDLAVVDLNADGWDDLIVGAPEFSKENMDEDVGGAVYVYINQAKGQNWNQIK
PVCLYGKRDSMFGLAVAHIGDINQDGYQDFAVSAPNEDSGRGRVYIYHGSAAGFRQKPEV
LDAGDPGIKSFGYSLAGNMDIDDNGYPDLVVGSLSDTVQVYRTKPVVNIEKTLTLSPNTI
DFKAQDCKTSSCILTAQSCFTYTAQLPTYNHKLRIKYTLKADTVRTERGLSSRVVFMNPE
DAQGYQELSVQGKQECFQTALVLLGDIQDKLTTIFISLSVSLPSNNPKQRVRNLPGLEPV
LNPLQENATKAQVTFLNAGCGNDNICQSNLQLQYSFCTKDQEEDKCDPLAMENDIPVISP
GDKNVALEVTVTNTGGDDAHQSQLSVTFPEFLQLSSVEPKKSSETQVQCNPNEYKTQANC
QLGNPFKRDSEVSFFLILNTERLSLRVTSANVTMLLKTISIQDIPVVVAEAKIIFELHLK
IVGLAKPSQVFFGGEVKDEKAMKSESDIGSLVQYEFRIINVGRPLKSFGSVVLHIQWPKA
TKEGKWLLYLMQIKDIEKNIIHCTPAEAINPLRFIKASSRGRREVERESGLKALASTTDF
FPFLGNKRKYKTLTCADDLRCVEIKCPLEAVDSTTAVVLHARLWNNTFLEEYNSLNYLDI
VLDAFLTLNGTLANIGMQPSDTKVKLTVFRESKPALLSRVPWWVIMFSILTALLVLGLLI
YLLRKFGCLNCGVCAKEKKV
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcagtcagtgggctctcctgttgaccgtgtggatgcttcggccaccgcaggtt
tctgcttttaacctggacacgcagaacgtgataaagaagcgtggagaagcgaacactttg
tttgggttttctatggccatgcatcatcagcttaaaccttcagaggaacgcgtattgctg
attggagcccctcgtgctaaagcattgcccagtcaaaatgccaatatatctggaggtctg
tacagatgtaaattcacaacagaatctgatgattgtgaacgcattcctgttgatataaaa
gaacgtcccattaacatccctggacaagattatagagaaaaccaatggctgggtgtccgt
gtccgaagtcagggtcgaggaggcaaagtagtgacttgtgcccacaggtaccaggattgg
agttttcaaaaccggcggttattgggcagatgttttgtcctggaacaggaccttaaattg
ttgacagatggagcagccacaaggacaatttgtagaaatcgggacccagaaaagcacaaa
tttggctactgtcaacaaggtgtctctgtagcattttctaaagacaacaaatatcttgtt
tatggagctccaggagcgtatgactggaaaggaattgtgcacatggagcctattgaaaac
ttctctttagaaacctatgaaacgggagataataatcagcgtcaacaagagcttattcct
gtggaaatcagcagctttttaggctttgctgtcgatactgggatgaacctaatgaagaaa
ggagagctgaatgttgtggccggagctccgctctcaaaccacagtggagaggttttgctg
ctgagacctgaagaaaaggcagaaacaagggacttgaaagctgagtacatccttcaaggc
ccaggtttggcctcttcctttggctatgacctcgctgttgttgacttaaatgcagatggg
tgggatgatcttattgtgggtgcacctgaattctccaaagaaaacatggatgaagatgta
ggaggggctgtgtatgtttacatcaaccaagccaaaggacaaaactggaaccaaatcaaa
ccagtgtgtctgtatgggaaaagggactctatgtttggactagcagtcgcacatattggg
gatatcaatcaagatggataccaagattttgcagtgagcgctcctaatgaagattcaggg
agaggtcgagtgtacatatatcatggttcagctgcagggtttcgtcaaaaaccagaggtt
ttagacgctggagaccctggtatcaaatcgtttggctattctctggctggaaacatggat
atagatgataatggctatccagaccttgttgtgggttcactttcagatactgtgcaagtt
tataggactaaaccagtggtaaacattgaaaagaccttaacattatcaccaaatactatt
gatttcaaggctcaggactgcaagacatcttcatgcattcttacagctcagtcctgcttc
acgtacactgcccaactgcctacatacaatcacaaattgaggatcaagtacacgctaaag
gctgatacagtacggacagagaggggtctttcttcacgagtggtctttatgaaccctgag
gatgcacagggataccaggaattgtctgtccagggcaaacaagagtgtttccagaccgct
ctcgtgctgctgggagatatccaagacaagctgactaccattttcatcagcctgtccgtt
tctttgccatctaacaatccgaaacagagagtcagaaacctccctggcttagagccagtt
ctgaaccctctgcaagagaatgcaaccaaagcacaggtcacctttttaaatgccggctgt
ggaaatgacaacatctgtcaaagtaacctgcagctccagtatagcttctgcaccaaagac
caagaagaagacaaatgtgaccctctagccatggaaaatgatattcctgtcatttctcct
ggtgataaaaacgttgccctggaggtcaccgtaaccaacacaggtggagatgatgcacac
cagagtcaactttctgtgacttttccagaatttctgcaactatcatcagtcgagccgaag
aagagtagtgaaactcaggtgcagtgtaaccccaatgaatataaaacacaggctaactgc
caacttggaaatccttttaaaagagactcagaggtttcgttcttcctgatacttaacaca
gaaagactttccctgagagtaacaagcgctaatgtgactatgctgctaaaaacgatcagc
attcaagatattccagtagttgtcgcagaagcaaaaattatatttgaactgcatctgaaa
atcgttggtcttgctaaaccttcccaagttttttttggaggagaagttaaagatgagaaa
gcaatgaaatcagaaagtgacatcggctctttggtccaatatgagttcaggatcattaac
gtcggtcggcccctgaagtccttcggttcagttgtgctacacattcagtggccaaaagca
accaaggaaggaaaatggctcctgtacctgatgcagatcaaggatatagaaaaaaatatt
attcactgcacgccagcagaggccatcaacccactcagatttatcaaggcatcatccaga
ggacggcgtgaagtagagcgtgaatcaggcctgaaggctcttgcctccactactgatttt
tttccatttttgggcaacaaaagaaagtataaaaccttgacatgtgctgatgacttaaga
tgtgtggagataaagtgccctcttgaggcagtggacagcacaacagctgtcgttcttcac
gcacgcttatggaacaatacttttctcgaggagtataattcattgaactacttggatatt
gtactggatgcctttttgacccttaatgggactcttgcgaatattgggatgcagccatct
gatactaaggtgaagctaactgtttttcgtgaaagcaagcctgctttgctcagtcgagtc
ccatggtgggtcattatgttcagcatattgaccgcactgctggtactgggtctcctcatc
tacctgttaaggaagtttggatgcttgaattgtggcgtgtgcgccaaagaaaagaaagta
tag
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integrated database retrieval system
