Labeo rohita (rohu): 127176608
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Entry
127176608 CDS
T09007
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C
KO
K05450
platelet derived growth factor C/D
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04020
Calcium signaling pathway
lroh04510
Focal adhesion
lroh04540
Gap junction
lroh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127176608 (pdgfc)
04020 Calcium signaling pathway
127176608 (pdgfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127176608 (pdgfc)
04540 Gap junction
127176608 (pdgfc)
09142 Cell motility
04810 Regulation of actin cytoskeleton
127176608 (pdgfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lroh04052
]
127176608 (pdgfc)
Cytokines and neuropeptides [BR:
lroh04052
]
Cytokines
Growth factors (RTK binding)
127176608 (pdgfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Neur
NDUS4
Motif
Other DBs
NCBI-GeneID:
127176608
NCBI-ProteinID:
XP_050984328
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All DBs
Position
14:complement(10763677..10822925)
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AA seq
343 aa
AA seq
DB search
MIPLLLLILISSLHQHESVAESSHISKVHHASTKEQNGVHESQHEKVLSVTGDGIIQSPD
FPNTYPRNTVIVWRLVAVTESSRIQLTFDPRFGLEDAEDGICKYDYVEVEEPVGDVVLGR
WCGSEMVPGPQVSKGNQILIRFVSDEYFPSDPGFCIRYSLLQQRQPEPEAPAAMPAWMQS
VDVLSEAVAGFSTMEEVMKYLEPDRWQVDIDDLYKPTWQVLGKSFFHQKKARGVVDLNLL
REEVRLYSCTPRNFSVSLREELKRTDAIFWPSCLLVKRCGGNCACCSHNCYDCQCSPTKV
AKKYHEVLMLKHRAGGRGLQKTLTDVPLEHHEECSCVCKNDSD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattccattgcttctcttgattcttatatcgtctcttcatcagcatgagtcggtggcg
gaatcgagtcacatcagtaaggttcaccacgccagtacgaaagagcagaatggagtgcat
gagtctcaacacgagaaggtcctcagtgtcactggggatggaattattcaaagtcccgac
ttccccaacacatatccccggaatacagttatagtgtggcggctggtggcagtcacagaa
agttccaggatccagctgacctttgatcctcgctttggcctggaggacgccgaagacggc
atttgcaagtatgattacgtggaggtggaggagcctgtcggagacgtggtgttgggtcgc
tggtgtggctcagagatggttccagggccccaggtgtctaagggaaaccagatcctgatc
cgcttcgtctccgacgaatattttccctctgacccaggattctgcatccgctactctttg
cttcagcagaggcagccggagcctgaggcccctgcagcgatgcctgcatggatgcagagt
gtggatgttttgagtgaagctgtagctggattcagcacgatggaggaagtgatgaaatac
ctggagccggatcgctggcaggtggacattgatgacctctacaagcctacctggcaggtt
ttgggcaagtcgttttttcaccaaaagaaagccagaggagtggtggacctgaacctgctt
cgtgaggaggtccggctttacagttgcactccacggaacttttccgtctcattgcgtgag
gagctgaaaaggacggacgccatcttctggcccagctgcctgctggtgaagcgctgtgga
gggaactgtgcatgctgctctcacaactgctatgattgccagtgctcgcccaccaaagtg
gccaaaaaataccatgaggttctgatgctgaaacacagggcagggggtcgggggctgcaa
aagactctaacggatgtcccgctggagcaccatgaggagtgtagctgtgtgtgtaaaaat
gactcagactaa
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