KEGG   Labeo rohita (rohu): 127176785
Entry
127176785         CDS       T09007                                 
Symbol
pnkp
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    127176785 (pnkp)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lroh01009]
    127176785 (pnkp)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lroh03400]
    127176785 (pnkp)
Enzymes [BR:lroh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     127176785 (pnkp)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     127176785 (pnkp)
Protein phosphatases and associated proteins [BR:lroh01009]
 HAD phosphatases
  Other HAD phosphatases
   127176785 (pnkp)
DNA repair and recombination proteins [BR:lroh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     127176785 (pnkp)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 Hydrolase_6
Other DBs
NCBI-GeneID: 127176785
NCBI-ProteinID: XP_050984524
LinkDB
Position
15:complement(15733970..15744313)
AA seq 591 aa
MKMQCTLVSVNGARVELADGRALMLGRGPETRITDKKCSRHQVKLVANYAKQEVLVTQLG
PNPSSLDGQCLGRGESGCLTAGCTLYLVNQSHPFTVEFVGNSDDKFSSPQKKGEAAHESR
NREKSSNDGSGPKRSIQDYFSKSPKKATKRPHSPEEDAPRTKRGRGGDDEDEEISAEEKL
KQLQAFAQQESSNKLDSPSVKTTTPSSTCSQSHWQQISSLLLFTAAGVPDSSKIAGFDID
GCIITTKSGKVFPTSPDDWRILFPEIQPRLASLLKKGYKVVFFTNQMGISRGKLRPEVFK
SKVEDILQTLQLPIQVFASTAPGIYRKPVIGMWEHLCEKANGGVPIDVSQSFYVGDAAGR
PANWAPGKKKKDFSCSDRLFARNLGLQFHTPEEYFLGWKPAQFSLPEFDPRKLDSKGRLY
DPPDASLTSTKQEVIVAVGFPGSGKSTFFQTHIIPKGYVYVNRDILGSWQHCVSACERAL
KEGRSVAVDNTNPDPESRKRYLDVSQSAGVPCRCFNFTASLEQAKHNNRFREMVPSATKH
VPVNDMVFNSYKKKFVAPSLSEGFSEILQIHFVPSFSDKRSEFLFRQFSEG
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgaagatgcagtgcacactagtaagtgtgaatggagctcgggtggagctggcagatggt
cgagctttaatgttaggtcgaggccctgaaacaagaattacagacaagaagtgctcaaga
catcaagtcaagcttgttgccaattatgccaaacaggaagttctggttacgcagctcggg
cccaacccttcatcccttgacggtcagtgtttgggacgtggcgagtccggatgtctgaca
gctggttgcacattgtacttggttaatcagtcccacccattcactgtggagtttgttgga
aattcagatgataagttttcctctcctcagaagaaaggagaagctgcgcatgaaagcaga
aacagagagaaaagctcaaatgatgggtcaggccccaaaaggagcatccaggattatttt
tctaaatcccctaaaaaggcgacaaagcgacctcacagcccagaggaggatgcccctcgc
acaaaacgaggacgtggtggtgatgatgaagatgaagagatctcagctgaggaaaagctt
aagcagttacaagcatttgcacagcaagagagtagtaacaagctggattcaccatcagtc
aaaaccactactccatcttccacttgctctcagagtcactggcaacaaatcagcagcctt
ctgctgtttactgcggcaggggttccagatagctccaaaatcgcagggtttgacattgat
ggctgcattatcactacaaagtctgggaaagtatttcccacaagtccagatgactggagg
attctcttcccagagattcagcctagactggccagtctgttgaagaaaggatacaaggtg
gtgttttttactaatcagatgggtatttcaagaggcaaactcagaccagaggtgttcaag
tcaaaagttgaggatattctacagacgctgcagctgcccattcaggtatttgcttccaca
gcccctggtatttacaggaagcctgttattgggatgtgggaacatctgtgtgagaaggcg
aatggaggagtgcctatagacgtgtcacagagcttttatgtaggagatgcagcaggacgt
cccgctaactgggcaccaggaaaaaagaagaaagacttctcctgcagtgacagactgttt
gcccgcaaccttggtctacagtttcacacaccagaggaatacttcttgggctggaaacct
gctcagttcagcttgccagaatttgaccctaggaaattagattctaaaggacgtctttac
gatcctcctgacgcctccctcacctccaccaagcaggaagtcattgtagcggtgggattt
cctggatcgggcaaatcaacattcttccagacacacatcattccaaagggctatgtctat
gtgaacagggacatacttgggtcctggcagcattgtgtttcagcctgtgaacgcgctcta
aaggaaggccgaagcgtcgcagtggacaacactaaccctgacccagagtctagaaaaaga
tatttagatgtcagtcaaagcgctggagttccctgcaggtgttttaacttcacagcgagt
ctggaacaagcaaaacacaacaacaggtttcgtgagatggttccttctgctaccaagcat
gttcctgtcaatgacatggtgtttaacagctataagaaaaagtttgtggcgcccagtttg
tctgagggcttctctgaaatcctgcagattcattttgtgccgagtttcagtgacaaaaga
tcagagtttctcttcaggcagttctctgagggctaa

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